EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013214 (Gene tree)
Gene ID: -
Gene Symbol: rcl1
Alias: zgc:109921
Full Name: RNA terminal phosphate cyclase-like 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5270 bases
Position: chr4:1024227-1029496
Accession: ZDB-GENE-040930-11
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016197	RTC	PF01137.21	1.8e-57	1	1
ENSTNIP00000016197	RTC_insert	PF05189.13	8.3e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016408	-	1122	-	ENSTNIP00000016197	373 (aa)	-	H3D6Q6

Gene Model

Click here to download ENSTNIG00000013214's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013214	rcl1	99	77.507	ENSG00000120158	RCL1	100	79.630	Homo_sapiens
ENSTNIG00000013214	rcl1	99	85.753	ENSAPOG00000015666	rcl1	100	85.753	Acanthochromis_polyacanthus
ENSTNIG00000013214	rcl1	99	78.049	ENSAMEG00000002631	RCL1	99	78.049	Ailuropoda_melanoleuca
ENSTNIG00000013214	rcl1	99	83.871	ENSACIG00000021195	rcl1	100	83.871	Amphilophus_citrinellus
ENSTNIG00000013214	rcl1	99	85.215	ENSAOCG00000002223	rcl1	100	85.215	Amphiprion_ocellaris
ENSTNIG00000013214	rcl1	99	85.484	ENSAPEG00000006905	rcl1	100	85.484	Amphiprion_percula
ENSTNIG00000013214	rcl1	99	86.022	ENSATEG00000020026	rcl1	100	86.022	Anabas_testudineus
ENSTNIG00000013214	rcl1	88	74.164	ENSAPLG00000006031	RCL1	100	74.164	Anas_platyrhynchos
ENSTNIG00000013214	rcl1	99	74.054	ENSACAG00000003640	RCL1	99	74.054	Anolis_carolinensis
ENSTNIG00000013214	rcl1	99	77.236	ENSANAG00000037372	RCL1	99	77.236	Aotus_nancymaae
ENSTNIG00000013214	rcl1	99	83.602	ENSACLG00000021724	rcl1	100	83.602	Astatotilapia_calliptera
ENSTNIG00000013214	rcl1	98	78.533	ENSAMXG00000033394	rcl1	99	78.533	Astyanax_mexicanus
ENSTNIG00000013214	rcl1	99	46.032	WBGene00022852	ZK1127.5	99	46.032	Caenorhabditis_elegans
ENSTNIG00000013214	rcl1	99	77.236	ENSCJAG00000011202	RCL1	99	77.236	Callithrix_jacchus
ENSTNIG00000013214	rcl1	99	78.320	ENSCAFG00000002091	RCL1	99	78.320	Canis_familiaris
ENSTNIG00000013214	rcl1	99	78.320	ENSCAFG00020000638	RCL1	77	78.320	Canis_lupus_dingo
ENSTNIG00000013214	rcl1	99	77.778	ENSCHIG00000012407	RCL1	99	77.778	Capra_hircus
ENSTNIG00000013214	rcl1	88	78.963	ENSTSYG00000009592	RCL1	97	80.220	Carlito_syrichta
ENSTNIG00000013214	rcl1	66	67.284	ENSCAPG00000013575	RCL1	100	67.284	Cavia_aperea
ENSTNIG00000013214	rcl1	99	77.027	ENSCPOG00000015354	RCL1	99	77.027	Cavia_porcellus
ENSTNIG00000013214	rcl1	99	77.236	ENSCCAG00000033505	RCL1	99	77.236	Cebus_capucinus
ENSTNIG00000013214	rcl1	99	76.965	ENSCATG00000034721	RCL1	97	79.121	Cercocebus_atys
ENSTNIG00000013214	rcl1	99	78.049	ENSCLAG00000007445	RCL1	99	78.049	Chinchilla_lanigera
ENSTNIG00000013214	rcl1	99	77.236	ENSCSAG00000008811	RCL1	99	77.236	Chlorocebus_sabaeus
ENSTNIG00000013214	rcl1	85	68.553	ENSCHOG00000007216	RCL1	98	68.553	Choloepus_hoffmanni
ENSTNIG00000013214	rcl1	99	73.713	ENSCPBG00000025481	RCL1	94	74.545	Chrysemys_picta_bellii
ENSTNIG00000013214	rcl1	98	58.108	ENSCING00000019565	-	98	58.108	Ciona_intestinalis
ENSTNIG00000013214	rcl1	99	77.236	ENSCANG00000027099	RCL1	99	77.236	Colobus_angolensis_palliatus
ENSTNIG00000013214	rcl1	99	77.778	ENSCGRG00001013748	Rcl1	99	77.778	Cricetulus_griseus_chok1gshd
ENSTNIG00000013214	rcl1	88	78.723	ENSCGRG00000005843	Rcl1	99	78.723	Cricetulus_griseus_crigri
ENSTNIG00000013214	rcl1	100	83.690	ENSCSEG00000000712	rcl1	98	83.690	Cynoglossus_semilaevis
ENSTNIG00000013214	rcl1	99	84.946	ENSCVAG00000011536	rcl1	100	84.946	Cyprinodon_variegatus
ENSTNIG00000013214	rcl1	98	76.986	ENSDARG00000038312	rcl1	99	76.986	Danio_rerio
ENSTNIG00000013214	rcl1	71	79.245	ENSDNOG00000019911	RCL1	100	81.019	Dasypus_novemcinctus
ENSTNIG00000013214	rcl1	99	78.320	ENSDORG00000015645	Rcl1	99	78.320	Dipodomys_ordii
ENSTNIG00000013214	rcl1	97	53.369	FBgn0020909	Rtc1	97	54.178	Drosophila_melanogaster
ENSTNIG00000013214	rcl1	88	54.878	ENSETEG00000014087	-	100	54.878	Echinops_telfairi
ENSTNIG00000013214	rcl1	99	54.424	ENSEBUG00000016621	-	99	54.424	Eptatretus_burgeri
ENSTNIG00000013214	rcl1	99	77.778	ENSEASG00005010653	RCL1	99	77.778	Equus_asinus_asinus
ENSTNIG00000013214	rcl1	99	77.507	ENSECAG00000015973	RCL1	99	77.507	Equus_caballus
ENSTNIG00000013214	rcl1	99	66.396	ENSEEUG00000009801	RCL1	99	66.396	Erinaceus_europaeus
ENSTNIG00000013214	rcl1	99	75.806	ENSELUG00000007353	rcl1	100	75.806	Esox_lucius
ENSTNIG00000013214	rcl1	99	77.838	ENSFCAG00000014557	RCL1	99	77.838	Felis_catus
ENSTNIG00000013214	rcl1	99	68.011	ENSFALG00000010553	RCL1	98	68.011	Ficedula_albicollis
ENSTNIG00000013214	rcl1	88	78.354	ENSFDAG00000004209	RCL1	100	78.354	Fukomys_damarensis
ENSTNIG00000013214	rcl1	100	85.294	ENSFHEG00000011228	rcl1	100	85.484	Fundulus_heteroclitus
ENSTNIG00000013214	rcl1	99	78.763	ENSGMOG00000004677	rcl1	100	78.763	Gadus_morhua
ENSTNIG00000013214	rcl1	98	73.569	ENSGALG00000015024	RCL1	98	73.569	Gallus_gallus
ENSTNIG00000013214	rcl1	99	84.677	ENSGAFG00000007257	rcl1	100	84.677	Gambusia_affinis
ENSTNIG00000013214	rcl1	99	86.828	ENSGACG00000017474	rcl1	100	86.828	Gasterosteus_aculeatus
ENSTNIG00000013214	rcl1	99	73.514	ENSGAGG00000003689	RCL1	99	73.514	Gopherus_agassizii
ENSTNIG00000013214	rcl1	99	77.507	ENSGGOG00000015041	RCL1	99	77.507	Gorilla_gorilla
ENSTNIG00000013214	rcl1	99	83.602	ENSHBUG00000001393	rcl1	100	83.602	Haplochromis_burtoni
ENSTNIG00000013214	rcl1	99	63.859	ENSHGLG00000005368	-	99	62.772	Heterocephalus_glaber_female
ENSTNIG00000013214	rcl1	99	77.507	ENSHGLG00000016452	RCL1	99	77.507	Heterocephalus_glaber_female
ENSTNIG00000013214	rcl1	99	72.629	ENSHGLG00100008718	-	99	72.629	Heterocephalus_glaber_male
ENSTNIG00000013214	rcl1	99	64.770	ENSHGLG00100018010	-	99	64.770	Heterocephalus_glaber_male
ENSTNIG00000013214	rcl1	99	84.409	ENSHCOG00000020170	rcl1	100	84.409	Hippocampus_comes
ENSTNIG00000013214	rcl1	98	80.109	ENSIPUG00000018054	RCL1	99	80.109	Ictalurus_punctatus
ENSTNIG00000013214	rcl1	99	76.757	ENSSTOG00000000023	RCL1	99	76.757	Ictidomys_tridecemlineatus
ENSTNIG00000013214	rcl1	54	61.386	ENSJJAG00000000764	-	98	61.386	Jaculus_jaculus
ENSTNIG00000013214	rcl1	99	68.564	ENSJJAG00000015632	-	99	68.564	Jaculus_jaculus
ENSTNIG00000013214	rcl1	98	78.747	ENSJJAG00000022803	-	98	78.747	Jaculus_jaculus
ENSTNIG00000013214	rcl1	99	85.753	ENSKMAG00000011946	rcl1	100	85.753	Kryptolebias_marmoratus
ENSTNIG00000013214	rcl1	99	80.914	ENSLBEG00000003957	rcl1	100	80.914	Labrus_bergylta
ENSTNIG00000013214	rcl1	91	71.930	ENSLACG00000004594	RCL1	100	75.466	Latimeria_chalumnae
ENSTNIG00000013214	rcl1	100	77.005	ENSLOCG00000010148	rcl1	99	77.005	Lepisosteus_oculatus
ENSTNIG00000013214	rcl1	99	76.757	ENSLAFG00000017495	RCL1	99	76.757	Loxodonta_africana
ENSTNIG00000013214	rcl1	99	77.236	ENSMFAG00000037906	RCL1	99	77.236	Macaca_fascicularis
ENSTNIG00000013214	rcl1	99	77.236	ENSMNEG00000012288	RCL1	99	77.236	Macaca_nemestrina
ENSTNIG00000013214	rcl1	99	77.236	ENSMLEG00000043088	RCL1	99	77.236	Mandrillus_leucophaeus
ENSTNIG00000013214	rcl1	99	85.215	ENSMAMG00000008311	rcl1	100	85.215	Mastacembelus_armatus
ENSTNIG00000013214	rcl1	99	83.602	ENSMZEG00005017292	rcl1	100	83.602	Maylandia_zebra
ENSTNIG00000013214	rcl1	58	73.182	ENSMGAG00000002245	RCL1	100	73.182	Meleagris_gallopavo
ENSTNIG00000013214	rcl1	58	79.630	ENSMAUG00000008922	Rcl1	100	79.630	Mesocricetus_auratus
ENSTNIG00000013214	rcl1	99	77.027	ENSMICG00000015562	RCL1	99	77.027	Microcebus_murinus
ENSTNIG00000013214	rcl1	99	77.507	ENSMOCG00000012145	Rcl1	99	77.507	Microtus_ochrogaster
ENSTNIG00000013214	rcl1	99	85.255	ENSMMOG00000021264	rcl1	100	85.255	Mola_mola
ENSTNIG00000013214	rcl1	94	76.068	ENSMODG00000015377	RCL1	93	76.068	Monodelphis_domestica
ENSTNIG00000013214	rcl1	99	86.022	ENSMALG00000018618	rcl1	100	86.022	Monopterus_albus
ENSTNIG00000013214	rcl1	99	77.507	MGP_CAROLIEiJ_G0022853	Rcl1	99	77.507	Mus_caroli
ENSTNIG00000013214	rcl1	99	77.507	ENSMUSG00000024785	Rcl1	99	77.507	Mus_musculus
ENSTNIG00000013214	rcl1	99	78.320	MGP_PahariEiJ_G0014346	Rcl1	100	79.532	Mus_pahari
ENSTNIG00000013214	rcl1	99	77.507	MGP_SPRETEiJ_G0023771	Rcl1	100	78.947	Mus_spretus
ENSTNIG00000013214	rcl1	99	77.236	ENSMPUG00000004998	RCL1	99	77.236	Mustela_putorius_furo
ENSTNIG00000013214	rcl1	99	76.423	ENSMLUG00000009654	RCL1	99	76.423	Myotis_lucifugus
ENSTNIG00000013214	rcl1	99	77.778	ENSNGAG00000015327	Rcl1	99	77.778	Nannospalax_galili
ENSTNIG00000013214	rcl1	92	82.507	ENSNBRG00000019854	rcl1	100	78.202	Neolamprologus_brichardi
ENSTNIG00000013214	rcl1	99	75.068	ENSNLEG00000008891	RCL1	99	75.068	Nomascus_leucogenys
ENSTNIG00000013214	rcl1	99	70.732	ENSMEUG00000007653	RCL1	99	70.732	Notamacropus_eugenii
ENSTNIG00000013214	rcl1	99	76.757	ENSOPRG00000010965	RCL1	99	76.757	Ochotona_princeps
ENSTNIG00000013214	rcl1	88	67.988	ENSODEG00000004151	RCL1	96	67.988	Octodon_degus
ENSTNIG00000013214	rcl1	99	84.140	ENSONIG00000003871	rcl1	100	84.140	Oreochromis_niloticus
ENSTNIG00000013214	rcl1	67	73.518	ENSOANG00000013193	-	98	74.699	Ornithorhynchus_anatinus
ENSTNIG00000013214	rcl1	99	76.757	ENSOCUG00000008161	RCL1	99	76.757	Oryctolagus_cuniculus
ENSTNIG00000013214	rcl1	99	83.065	ENSORLG00000010443	rcl1	100	83.065	Oryzias_latipes
ENSTNIG00000013214	rcl1	99	83.333	ENSORLG00020012211	rcl1	100	83.333	Oryzias_latipes_hni
ENSTNIG00000013214	rcl1	99	82.796	ENSORLG00015001122	rcl1	100	82.796	Oryzias_latipes_hsok
ENSTNIG00000013214	rcl1	99	84.718	ENSOMEG00000022976	rcl1	88	84.718	Oryzias_melastigma
ENSTNIG00000013214	rcl1	98	77.657	ENSOGAG00000007480	RCL1	98	77.657	Otolemur_garnettii
ENSTNIG00000013214	rcl1	99	77.778	ENSOARG00000013463	RCL1	99	77.778	Ovis_aries
ENSTNIG00000013214	rcl1	99	77.236	ENSPPAG00000037958	RCL1	99	77.236	Pan_paniscus
ENSTNIG00000013214	rcl1	99	77.027	ENSPPRG00000022645	RCL1	99	77.027	Panthera_pardus
ENSTNIG00000013214	rcl1	87	78.899	ENSPTIG00000019031	RCL1	100	80.093	Panthera_tigris_altaica
ENSTNIG00000013214	rcl1	99	77.236	ENSPTRG00000020743	RCL1	99	77.236	Pan_troglodytes
ENSTNIG00000013214	rcl1	99	77.236	ENSPANG00000025151	RCL1	99	77.236	Papio_anubis
ENSTNIG00000013214	rcl1	99	76.344	ENSPKIG00000021022	rcl1	100	76.344	Paramormyrops_kingsleyae
ENSTNIG00000013214	rcl1	88	74.772	ENSPSIG00000012302	RCL1	100	74.772	Pelodiscus_sinensis
ENSTNIG00000013214	rcl1	99	84.409	ENSPMGG00000024007	rcl1	100	84.409	Periophthalmus_magnuspinnatus
ENSTNIG00000013214	rcl1	99	77.778	ENSPEMG00000023275	Rcl1	99	77.778	Peromyscus_maniculatus_bairdii
ENSTNIG00000013214	rcl1	99	76.694	ENSPCIG00000000188	RCL1	99	76.694	Phascolarctos_cinereus
ENSTNIG00000013214	rcl1	100	85.294	ENSPFOG00000019682	rcl1	99	85.294	Poecilia_formosa
ENSTNIG00000013214	rcl1	99	85.484	ENSPLAG00000022354	rcl1	100	85.484	Poecilia_latipinna
ENSTNIG00000013214	rcl1	99	85.484	ENSPMEG00000008131	rcl1	100	85.484	Poecilia_mexicana
ENSTNIG00000013214	rcl1	99	85.215	ENSPREG00000008032	rcl1	100	85.215	Poecilia_reticulata
ENSTNIG00000013214	rcl1	99	77.778	ENSPPYG00000019244	RCL1	99	77.778	Pongo_abelii
ENSTNIG00000013214	rcl1	99	72.432	ENSPCAG00000001440	RCL1	99	72.432	Procavia_capensis
ENSTNIG00000013214	rcl1	99	77.568	ENSPCOG00000009611	RCL1	97	79.670	Propithecus_coquereli
ENSTNIG00000013214	rcl1	99	77.236	ENSPVAG00000015752	RCL1	99	77.236	Pteropus_vampyrus
ENSTNIG00000013214	rcl1	99	83.602	ENSPNYG00000012910	rcl1	100	83.602	Pundamilia_nyererei
ENSTNIG00000013214	rcl1	98	80.707	ENSPNAG00000028307	rcl1	91	80.707	Pygocentrus_nattereri
ENSTNIG00000013214	rcl1	99	76.694	ENSRNOG00000015491	Rcl1	99	76.694	Rattus_norvegicus
ENSTNIG00000013214	rcl1	99	76.965	ENSRBIG00000035818	RCL1	99	76.965	Rhinopithecus_bieti
ENSTNIG00000013214	rcl1	99	77.236	ENSRROG00000029781	RCL1	99	77.236	Rhinopithecus_roxellana
ENSTNIG00000013214	rcl1	97	36.885	YOL010W	-	97	36.885	Saccharomyces_cerevisiae
ENSTNIG00000013214	rcl1	99	77.507	ENSSBOG00000026369	RCL1	99	77.507	Saimiri_boliviensis_boliviensis
ENSTNIG00000013214	rcl1	88	77.341	ENSSHAG00000014086	RCL1	100	77.341	Sarcophilus_harrisii
ENSTNIG00000013214	rcl1	99	75.538	ENSSFOG00015023020	rcl1	100	75.538	Scleropages_formosus
ENSTNIG00000013214	rcl1	100	85.829	ENSSMAG00000019751	rcl1	86	85.829	Scophthalmus_maximus
ENSTNIG00000013214	rcl1	99	86.022	ENSSDUG00000006349	rcl1	100	86.022	Seriola_dumerili
ENSTNIG00000013214	rcl1	99	85.484	ENSSLDG00000022076	rcl1	100	85.484	Seriola_lalandi_dorsalis
ENSTNIG00000013214	rcl1	99	77.507	ENSSARG00000009260	RCL1	99	77.507	Sorex_araneus
ENSTNIG00000013214	rcl1	99	74.324	ENSSPUG00000016330	RCL1	99	74.324	Sphenodon_punctatus
ENSTNIG00000013214	rcl1	99	86.022	ENSSPAG00000018038	rcl1	100	86.022	Stegastes_partitus
ENSTNIG00000013214	rcl1	99	77.778	ENSSSCG00000005217	RCL1	82	77.778	Sus_scrofa
ENSTNIG00000013214	rcl1	98	73.171	ENSTGUG00000005138	RCL1	98	73.171	Taeniopygia_guttata
ENSTNIG00000013214	rcl1	99	92.204	ENSTRUG00000010493	rcl1	100	92.204	Takifugu_rubripes
ENSTNIG00000013214	rcl1	99	73.442	ENSTBEG00000016339	RCL1	99	73.442	Tupaia_belangeri
ENSTNIG00000013214	rcl1	99	77.778	ENSTTRG00000016525	RCL1	99	77.778	Tursiops_truncatus
ENSTNIG00000013214	rcl1	99	78.049	ENSUAMG00000005598	RCL1	99	78.049	Ursus_americanus
ENSTNIG00000013214	rcl1	88	78.354	ENSUMAG00000017890	RCL1	97	78.354	Ursus_maritimus
ENSTNIG00000013214	rcl1	88	78.659	ENSVPAG00000009188	RCL1	100	78.659	Vicugna_pacos
ENSTNIG00000013214	rcl1	88	79.635	ENSVVUG00000007304	RCL1	89	79.635	Vulpes_vulpes
ENSTNIG00000013214	rcl1	98	69.837	ENSXETG00000000592	rcl1	98	69.837	Xenopus_tropicalis
ENSTNIG00000013214	rcl1	99	85.215	ENSXCOG00000004922	rcl1	100	85.215	Xiphophorus_couchianus
ENSTNIG00000013214	rcl1	99	85.215	ENSXMAG00000022366	RCL1	100	85.215	Xiphophorus_maculatus