EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013243 (Gene tree)
Gene ID: -
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 10608 bases
Position: chr4:725304-735911
Accession: ZDB-GENE-041114-114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016226	YTH	PF04146.15	6.8e-43	1	1
ENSTNIP00000016227	YTH	PF04146.15	3.9e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016439	-	1827	-	ENSTNIP00000016227	609 (aa)	-	H3D6T6
ENSTNIT00000016438	-	1929	-	ENSTNIP00000016226	643 (aa)	-	H3D6T5

Gene Model

Click here to download ENSTNIG00000013243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013243	ythdc1	89	66.279	ENSG00000083896	YTHDC1	86	60.304	Homo_sapiens
ENSTNIG00000013243	ythdc1	91	72.033	ENSAPOG00000013997	ythdc1	96	71.564	Acanthochromis_polyacanthus
ENSTNIG00000013243	ythdc1	89	66.047	ENSAMEG00000005688	YTHDC1	87	60.738	Ailuropoda_melanoleuca
ENSTNIG00000013243	ythdc1	91	73.730	ENSACIG00000019728	ythdc1	96	74.703	Amphilophus_citrinellus
ENSTNIG00000013243	ythdc1	91	76.287	ENSAOCG00000000239	ythdc1	96	73.596	Amphiprion_ocellaris
ENSTNIG00000013243	ythdc1	83	77.601	ENSAPEG00000000618	ythdc1	89	75.398	Amphiprion_percula
ENSTNIG00000013243	ythdc1	85	72.231	ENSATEG00000023007	ythdc1	91	74.731	Anabas_testudineus
ENSTNIG00000013243	ythdc1	89	53.976	ENSAPLG00000009921	YTHDC1	92	51.761	Anas_platyrhynchos
ENSTNIG00000013243	ythdc1	75	63.953	ENSACAG00000009697	YTHDC1	93	50.444	Anolis_carolinensis
ENSTNIG00000013243	ythdc1	89	66.047	ENSANAG00000001522	YTHDC1	86	60.304	Aotus_nancymaae
ENSTNIG00000013243	ythdc1	91	75.819	ENSACLG00000019371	ythdc1	96	74.203	Astatotilapia_calliptera
ENSTNIG00000013243	ythdc1	89	65.349	ENSBTAG00000015572	YTHDC1	86	60.304	Bos_taurus
ENSTNIG00000013243	ythdc1	89	66.279	ENSCJAG00000009934	YTHDC1	86	60.304	Callithrix_jacchus
ENSTNIG00000013243	ythdc1	89	66.047	ENSCAFG00000002821	YTHDC1	87	60.738	Canis_familiaris
ENSTNIG00000013243	ythdc1	89	66.047	ENSCAFG00020027112	YTHDC1	87	60.738	Canis_lupus_dingo
ENSTNIG00000013243	ythdc1	88	56.019	ENSCHIG00000004810	YTHDC1	94	50.480	Capra_hircus
ENSTNIG00000013243	ythdc1	89	66.279	ENSTSYG00000011668	YTHDC1	86	60.304	Carlito_syrichta
ENSTNIG00000013243	ythdc1	86	43.182	ENSCAPG00000008722	YTHDC1	89	34.227	Cavia_aperea
ENSTNIG00000013243	ythdc1	89	58.879	ENSCPOG00000010929	YTHDC1	85	55.756	Cavia_porcellus
ENSTNIG00000013243	ythdc1	89	66.279	ENSCCAG00000035754	YTHDC1	88	60.606	Cebus_capucinus
ENSTNIG00000013243	ythdc1	89	65.068	ENSCATG00000036320	YTHDC1	90	62.069	Cercocebus_atys
ENSTNIG00000013243	ythdc1	88	64.760	ENSCLAG00000005482	YTHDC1	91	60.085	Chinchilla_lanigera
ENSTNIG00000013243	ythdc1	89	65.581	ENSCSAG00000005252	YTHDC1	86	60.304	Chlorocebus_sabaeus
ENSTNIG00000013243	ythdc1	90	56.825	ENSCPBG00000021965	YTHDC1	94	52.113	Chrysemys_picta_bellii
ENSTNIG00000013243	ythdc1	89	66.279	ENSCANG00000004769	YTHDC1	90	62.069	Colobus_angolensis_palliatus
ENSTNIG00000013243	ythdc1	89	64.384	ENSCGRG00001000816	Ythdc1	86	58.849	Cricetulus_griseus_chok1gshd
ENSTNIG00000013243	ythdc1	88	65.581	ENSCGRG00000009807	Ythdc1	86	59.870	Cricetulus_griseus_crigri
ENSTNIG00000013243	ythdc1	91	74.219	ENSCSEG00000020404	ythdc1	96	71.646	Cynoglossus_semilaevis
ENSTNIG00000013243	ythdc1	85	83.704	ENSCVAG00000022349	ythdc1	96	70.213	Cyprinodon_variegatus
ENSTNIG00000013243	ythdc1	91	59.685	ENSDARG00000051953	ythdc1	92	58.954	Danio_rerio
ENSTNIG00000013243	ythdc1	89	67.711	ENSDNOG00000004949	YTHDC1	87	60.087	Dasypus_novemcinctus
ENSTNIG00000013243	ythdc1	88	66.279	ENSDORG00000013045	Ythdc1	91	60.087	Dipodomys_ordii
ENSTNIG00000013243	ythdc1	68	69.231	ENSETEG00000001878	YTHDC1	66	69.231	Echinops_telfairi
ENSTNIG00000013243	ythdc1	60	40.000	ENSEBUG00000013696	ythdc1	63	41.026	Eptatretus_burgeri
ENSTNIG00000013243	ythdc1	89	66.047	ENSEASG00005018383	YTHDC1	87	60.738	Equus_asinus_asinus
ENSTNIG00000013243	ythdc1	89	66.047	ENSECAG00000018303	YTHDC1	92	64.286	Equus_caballus
ENSTNIG00000013243	ythdc1	85	65.116	ENSEEUG00000015466	YTHDC1	86	59.870	Erinaceus_europaeus
ENSTNIG00000013243	ythdc1	78	66.972	ENSELUG00000014029	ythdc1	92	56.925	Esox_lucius
ENSTNIG00000013243	ythdc1	89	66.047	ENSFCAG00000026791	YTHDC1	86	60.738	Felis_catus
ENSTNIG00000013243	ythdc1	71	66.998	ENSFALG00000006581	YTHDC1	85	68.733	Ficedula_albicollis
ENSTNIG00000013243	ythdc1	88	65.967	ENSFDAG00000018560	YTHDC1	88	60.823	Fukomys_damarensis
ENSTNIG00000013243	ythdc1	75	73.134	ENSFHEG00000001286	ythdc1	94	58.075	Fundulus_heteroclitus
ENSTNIG00000013243	ythdc1	55	82.743	ENSGMOG00000018815	ythdc1	83	65.217	Gadus_morhua
ENSTNIG00000013243	ythdc1	61	65.814	ENSGALG00000035906	YTHDC1	59	61.991	Gallus_gallus
ENSTNIG00000013243	ythdc1	68	70.670	ENSGAFG00000001759	ythdc1	94	71.363	Gambusia_affinis
ENSTNIG00000013243	ythdc1	91	65.172	ENSGACG00000015486	ythdc1	97	64.604	Gasterosteus_aculeatus
ENSTNIG00000013243	ythdc1	90	56.132	ENSGAGG00000007108	YTHDC1	92	51.835	Gopherus_agassizii
ENSTNIG00000013243	ythdc1	89	65.068	ENSGGOG00000021958	YTHDC1	91	62.069	Gorilla_gorilla
ENSTNIG00000013243	ythdc1	91	75.975	ENSHBUG00000019288	ythdc1	96	74.355	Haplochromis_burtoni
ENSTNIG00000013243	ythdc1	92	44.497	ENSHGLG00000003239	-	72	59.322	Heterocephalus_glaber_female
ENSTNIG00000013243	ythdc1	89	64.760	ENSHGLG00000006319	-	89	59.615	Heterocephalus_glaber_female
ENSTNIG00000013243	ythdc1	92	43.125	ENSHGLG00100008060	-	72	59.322	Heterocephalus_glaber_male
ENSTNIG00000013243	ythdc1	89	64.203	ENSHGLG00100001556	-	89	59.483	Heterocephalus_glaber_male
ENSTNIG00000013243	ythdc1	70	75.881	ENSHCOG00000001520	ythdc1	79	82.979	Hippocampus_comes
ENSTNIG00000013243	ythdc1	91	58.926	ENSIPUG00000018136	ythdc1	92	58.095	Ictalurus_punctatus
ENSTNIG00000013243	ythdc1	85	64.840	ENSSTOG00000013652	YTHDC1	86	59.275	Ictidomys_tridecemlineatus
ENSTNIG00000013243	ythdc1	79	64.155	ENSJJAG00000010268	Ythdc1	92	50.663	Jaculus_jaculus
ENSTNIG00000013243	ythdc1	62	84.352	ENSKMAG00000006483	ythdc1	89	83.138	Kryptolebias_marmoratus
ENSTNIG00000013243	ythdc1	69	88.889	ENSLBEG00000020831	ythdc1	94	88.889	Labrus_bergylta
ENSTNIG00000013243	ythdc1	62	64.203	ENSLACG00000004893	YTHDC1	65	59.570	Latimeria_chalumnae
ENSTNIG00000013243	ythdc1	89	66.204	ENSLOCG00000003045	ythdc1	92	55.660	Lepisosteus_oculatus
ENSTNIG00000013243	ythdc1	89	65.297	ENSLAFG00000021592	YTHDC1	100	56.912	Loxodonta_africana
ENSTNIG00000013243	ythdc1	89	65.068	ENSMFAG00000031927	YTHDC1	90	62.069	Macaca_fascicularis
ENSTNIG00000013243	ythdc1	89	66.279	ENSMMUG00000002265	YTHDC1	86	61.842	Macaca_mulatta
ENSTNIG00000013243	ythdc1	89	66.279	ENSMNEG00000033751	YTHDC1	90	62.069	Macaca_nemestrina
ENSTNIG00000013243	ythdc1	89	66.047	ENSMLEG00000042147	YTHDC1	90	62.069	Mandrillus_leucophaeus
ENSTNIG00000013243	ythdc1	61	86.634	ENSMAMG00000013122	ythdc1	95	74.174	Mastacembelus_armatus
ENSTNIG00000013243	ythdc1	91	75.819	ENSMZEG00005023173	ythdc1	96	74.203	Maylandia_zebra
ENSTNIG00000013243	ythdc1	62	65.581	ENSMGAG00000010391	YTHDC1	64	60.349	Meleagris_gallopavo
ENSTNIG00000013243	ythdc1	89	64.384	ENSMAUG00000001286	Ythdc1	86	58.849	Mesocricetus_auratus
ENSTNIG00000013243	ythdc1	89	66.279	ENSMICG00000034640	YTHDC1	86	60.738	Microcebus_murinus
ENSTNIG00000013243	ythdc1	89	65.534	ENSMOCG00000020201	Ythdc1	86	59.275	Microtus_ochrogaster
ENSTNIG00000013243	ythdc1	91	69.331	ENSMMOG00000021200	ythdc1	96	73.460	Mola_mola
ENSTNIG00000013243	ythdc1	91	54.148	ENSMODG00000020754	-	92	52.006	Monodelphis_domestica
ENSTNIG00000013243	ythdc1	54	51.775	ENSMODG00000004117	-	93	54.459	Monodelphis_domestica
ENSTNIG00000013243	ythdc1	93	45.685	ENSMODG00000014337	-	95	44.732	Monodelphis_domestica
ENSTNIG00000013243	ythdc1	74	48.736	ENSMODG00000010076	-	63	54.783	Monodelphis_domestica
ENSTNIG00000013243	ythdc1	65	48.506	ENSMODG00000009173	-	74	55.362	Monodelphis_domestica
ENSTNIG00000013243	ythdc1	84	75.571	ENSMALG00000013412	ythdc1	93	76.199	Monopterus_albus
ENSTNIG00000013243	ythdc1	89	65.581	MGP_CAROLIEiJ_G0027347	Ythdc1	93	63.312	Mus_caroli
ENSTNIG00000013243	ythdc1	89	65.581	ENSMUSG00000035851	Ythdc1	91	61.513	Mus_musculus
ENSTNIG00000013243	ythdc1	89	65.581	MGP_PahariEiJ_G0017126	Ythdc1	88	61.842	Mus_pahari
ENSTNIG00000013243	ythdc1	89	65.581	MGP_SPRETEiJ_G0028339	Ythdc1	91	61.513	Mus_spretus
ENSTNIG00000013243	ythdc1	70	69.761	ENSMPUG00000001743	YTHDC1	60	68.182	Mustela_putorius_furo
ENSTNIG00000013243	ythdc1	75	65.814	ENSMLUG00000016300	YTHDC1	86	60.521	Myotis_lucifugus
ENSTNIG00000013243	ythdc1	83	72.661	ENSNBRG00000007663	ythdc1	96	71.403	Neolamprologus_brichardi
ENSTNIG00000013243	ythdc1	88	64.155	ENSNLEG00000009202	YTHDC1	90	60.815	Nomascus_leucogenys
ENSTNIG00000013243	ythdc1	71	67.405	ENSOPRG00000008986	YTHDC1	66	66.990	Ochotona_princeps
ENSTNIG00000013243	ythdc1	89	65.268	ENSODEG00000001715	YTHDC1	89	60.738	Octodon_degus
ENSTNIG00000013243	ythdc1	92	90.909	ENSONIG00000012651	ythdc1	93	91.111	Oreochromis_niloticus
ENSTNIG00000013243	ythdc1	91	69.737	ENSOCUG00000015886	YTHDC1	73	70.506	Oryctolagus_cuniculus
ENSTNIG00000013243	ythdc1	91	68.232	ENSORLG00000030544	ythdc1	98	68.196	Oryzias_latipes
ENSTNIG00000013243	ythdc1	91	69.844	ENSORLG00020019316	ythdc1	98	69.757	Oryzias_latipes_hni
ENSTNIG00000013243	ythdc1	62	82.963	ENSOMEG00000000551	ythdc1	98	68.923	Oryzias_melastigma
ENSTNIG00000013243	ythdc1	89	66.512	ENSOGAG00000003362	YTHDC1	86	60.738	Otolemur_garnettii
ENSTNIG00000013243	ythdc1	89	65.349	ENSOARG00000008633	YTHDC1	86	60.304	Ovis_aries
ENSTNIG00000013243	ythdc1	89	65.068	ENSPPAG00000041315	YTHDC1	89	63.636	Pan_paniscus
ENSTNIG00000013243	ythdc1	89	64.840	ENSPPRG00000011979	YTHDC1	86	59.701	Panthera_pardus
ENSTNIG00000013243	ythdc1	88	64.384	ENSPTIG00000015527	YTHDC1	86	59.275	Panthera_tigris_altaica
ENSTNIG00000013243	ythdc1	89	65.068	ENSPTRG00000016105	YTHDC1	89	63.636	Pan_troglodytes
ENSTNIG00000013243	ythdc1	89	65.068	ENSPANG00000021590	YTHDC1	89	62.069	Papio_anubis
ENSTNIG00000013243	ythdc1	89	70.396	ENSPKIG00000018497	ythdc1	75	69.841	Paramormyrops_kingsleyae
ENSTNIG00000013243	ythdc1	90	53.433	ENSPSIG00000002782	YTHDC1	92	52.315	Pelodiscus_sinensis
ENSTNIG00000013243	ythdc1	63	72.981	ENSPMGG00000000970	-	78	72.586	Periophthalmus_magnuspinnatus
ENSTNIG00000013243	ythdc1	88	65.349	ENSPEMG00000013850	Ythdc1	86	59.870	Peromyscus_maniculatus_bairdii
ENSTNIG00000013243	ythdc1	91	53.997	ENSPCIG00000006870	YTHDC1	92	52.006	Phascolarctos_cinereus
ENSTNIG00000013243	ythdc1	62	83.990	ENSPFOG00000013404	ythdc1	96	73.292	Poecilia_formosa
ENSTNIG00000013243	ythdc1	62	83.990	ENSPLAG00000011079	ythdc1	90	82.436	Poecilia_latipinna
ENSTNIG00000013243	ythdc1	62	83.990	ENSPMEG00000009238	ythdc1	96	73.447	Poecilia_mexicana
ENSTNIG00000013243	ythdc1	87	74.877	ENSPREG00000016973	ythdc1	96	70.579	Poecilia_reticulata
ENSTNIG00000013243	ythdc1	62	66.279	ENSPPYG00000014726	YTHDC1	69	60.304	Pongo_abelii
ENSTNIG00000013243	ythdc1	60	59.910	ENSPCAG00000009607	YTHDC1	77	59.361	Procavia_capensis
ENSTNIG00000013243	ythdc1	89	58.676	ENSPCOG00000019105	YTHDC1	86	53.945	Propithecus_coquereli
ENSTNIG00000013243	ythdc1	89	62.791	ENSPVAG00000015551	YTHDC1	85	57.701	Pteropus_vampyrus
ENSTNIG00000013243	ythdc1	91	75.819	ENSPNYG00000011687	ythdc1	96	74.203	Pundamilia_nyererei
ENSTNIG00000013243	ythdc1	84	75.188	ENSPNAG00000028365	ythdc1	92	59.468	Pygocentrus_nattereri
ENSTNIG00000013243	ythdc1	90	64.840	ENSRNOG00000001996	Ythdc1	90	58.849	Rattus_norvegicus
ENSTNIG00000013243	ythdc1	88	65.367	ENSRBIG00000028279	YTHDC1	90	63.636	Rhinopithecus_bieti
ENSTNIG00000013243	ythdc1	89	66.279	ENSRROG00000035028	YTHDC1	90	62.069	Rhinopithecus_roxellana
ENSTNIG00000013243	ythdc1	89	65.068	ENSSBOG00000022353	YTHDC1	90	62.069	Saimiri_boliviensis_boliviensis
ENSTNIG00000013243	ythdc1	91	53.243	ENSSHAG00000002538	YTHDC1	92	50.817	Sarcophilus_harrisii
ENSTNIG00000013243	ythdc1	74	70.892	ENSSFOG00015003298	ythdc1	68	74.372	Scleropages_formosus
ENSTNIG00000013243	ythdc1	61	84.080	ENSSMAG00000009086	ythdc1	96	71.166	Scophthalmus_maximus
ENSTNIG00000013243	ythdc1	61	86.104	ENSSDUG00000022008	ythdc1	97	75.000	Seriola_dumerili
ENSTNIG00000013243	ythdc1	61	86.104	ENSSLDG00000007926	ythdc1	97	75.000	Seriola_lalandi_dorsalis
ENSTNIG00000013243	ythdc1	62	65.349	ENSSARG00000010960	YTHDC1	78	60.087	Sorex_araneus
ENSTNIG00000013243	ythdc1	62	65.116	ENSSPUG00000009357	YTHDC1	92	51.493	Sphenodon_punctatus
ENSTNIG00000013243	ythdc1	62	85.504	ENSSPAG00000011449	ythdc1	97	74.699	Stegastes_partitus
ENSTNIG00000013243	ythdc1	88	66.279	ENSSSCG00000035505	YTHDC1	88	59.873	Sus_scrofa
ENSTNIG00000013243	ythdc1	61	65.581	ENSTGUG00000004452	-	64	60.606	Taeniopygia_guttata
ENSTNIG00000013243	ythdc1	92	66.984	ENSTRUG00000010142	ythdc1	95	59.762	Takifugu_rubripes
ENSTNIG00000013243	ythdc1	74	65.340	ENSTBEG00000011546	YTHDC1	70	60.217	Tupaia_belangeri
ENSTNIG00000013243	ythdc1	89	64.884	ENSTTRG00000005083	YTHDC1	87	59.436	Tursiops_truncatus
ENSTNIG00000013243	ythdc1	62	66.047	ENSUAMG00000010388	YTHDC1	64	60.738	Ursus_americanus
ENSTNIG00000013243	ythdc1	62	58.140	ENSUMAG00000013668	YTHDC1	90	48.943	Ursus_maritimus
ENSTNIG00000013243	ythdc1	89	62.972	ENSVPAG00000009040	YTHDC1	86	58.862	Vicugna_pacos
ENSTNIG00000013243	ythdc1	88	64.840	ENSVVUG00000005387	YTHDC1	86	59.701	Vulpes_vulpes
ENSTNIG00000013243	ythdc1	91	56.757	ENSXETG00000017960	ythdc1	92	55.714	Xenopus_tropicalis
ENSTNIG00000013243	ythdc1	57	65.056	ENSXCOG00000000530	ythdc1	91	56.808	Xiphophorus_couchianus
ENSTNIG00000013243	ythdc1	91	73.684	ENSXMAG00000005196	ythdc1	97	72.231	Xiphophorus_maculatus