EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSTNIG00000013463 (Gene tree)
Gene ID
-
Gene Symbol
srek1
Alias
zgc:100974
Full Name
splicing regulatory glutamine/lysine-rich protein 1
Gene Type
protein_coding
Species
Tetraodon_nigroviridis
Status
putative
Strand
Minus strand
Length
4159 bases
Position
chr4:4955722-4959880
Accession
ZDB-GENE-040801-132
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSTNIP00000016458RRM_1PF00076.222e-2012
ENSTNIP00000016458RRM_1PF00076.222e-2022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSTNIT00000016671-1194-ENSTNIP00000016458398 (aa)-H3D7G7
Gene Model
Click here to download ENSTNIG00000013463's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013463's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSTNIG00000013463srek16940.072ENSTNIG00000010494srsf115656.934
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSTNIG00000013463srek17043.885ENSG00000116754SRSF116770.930Homo_sapiens
ENSTNIG00000013463srek16878.136ENSG00000153914SREK18187.654Homo_sapiens
ENSTNIG00000013463srek15685.268ENSAPOG00000023618srek18274.375Acanthochromis_polyacanthus
ENSTNIG00000013463srek16942.599ENSAPOG00000004488-9362.136Acanthochromis_polyacanthus
ENSTNIG00000013463srek16878.136ENSAMEG00000011327SREK18048.515Ailuropoda_melanoleuca
ENSTNIG00000013463srek17869.388ENSAOCG00000024379srek18275.312Amphiprion_ocellaris
ENSTNIG00000013463srek16941.155ENSAOCG00000010541-6736.935Amphiprion_ocellaris
ENSTNIG00000013463srek16942.960ENSAPEG00000003619SRSF119362.136Amphiprion_percula
ENSTNIG00000013463srek16941.155ENSAPEG00000003142SRSF118564.634Amphiprion_percula
ENSTNIG00000013463srek16940.143ENSATEG00000011691srsf117565.432Anabas_testudineus
ENSTNIG00000013463srek17368.634ENSATEG00000009450srek18370.186Anabas_testudineus
ENSTNIG00000013463srek16943.478ENSATEG00000007534-9362.136Anabas_testudineus
ENSTNIG00000013463srek16878.571ENSAPLG00000003948-6978.571Anas_platyrhynchos
ENSTNIG00000013463srek16942.960ENSACAG00000013654SRSF116939.196Anolis_carolinensis
ENSTNIG00000013463srek17043.885ENSANAG00000018690-6540.201Aotus_nancymaae
ENSTNIG00000013463srek16978.214ENSANAG00000031358SREK18187.654Aotus_nancymaae
ENSTNIG00000013463srek16987.814ENSACLG00000026754srek19687.814Astatotilapia_calliptera
ENSTNIG00000013463srek16982.230ENSAMXG00000043877srek17869.821Astyanax_mexicanus
ENSTNIG00000013463srek17043.885ENSAMXG00000008655-6540.519Astyanax_mexicanus
ENSTNIG00000013463srek16878.495ENSBTAG00000007321SREK18187.654Bos_taurus
ENSTNIG00000013463srek17043.525ENSBTAG00000015474SRSF116639.950Bos_taurus
ENSTNIG00000013463srek17043.885ENSCJAG00000017704SRSF117740.000Callithrix_jacchus
ENSTNIG00000013463srek16978.214ENSCJAG00000015950SREK18187.654Callithrix_jacchus
ENSTNIG00000013463srek16878.136ENSCAFG00000007560SREK17648.250Canis_familiaris
ENSTNIG00000013463srek16944.161ENSCHIG00000025295SRSF117568.539Capra_hircus
ENSTNIG00000013463srek17041.516ENSTSYG00000033270-6567.742Carlito_syrichta
ENSTNIG00000013463srek16878.136ENSTSYG00000036957SREK18187.654Carlito_syrichta
ENSTNIG00000013463srek16879.004ENSCPOG00000008925SREK17365.432Cavia_porcellus
ENSTNIG00000013463srek17938.730ENSCPOG00000009554SRSF116238.583Cavia_porcellus
ENSTNIG00000013463srek16878.136ENSCCAG00000020591SREK18187.654Cebus_capucinus
ENSTNIG00000013463srek17043.885ENSCCAG00000036133-6540.201Cebus_capucinus
ENSTNIG00000013463srek17043.885ENSCATG00000043613SRSF116540.201Cercocebus_atys
ENSTNIG00000013463srek16978.214ENSCATG00000031482SREK18187.654Cercocebus_atys
ENSTNIG00000013463srek16878.648ENSCLAG00000005024SREK16665.602Chinchilla_lanigera
ENSTNIG00000013463srek17043.885ENSCSAG00000001375SRSF116540.201Chlorocebus_sabaeus
ENSTNIG00000013463srek16877.419ENSCPBG00000026866SREK18377.419Chrysemys_picta_bellii
ENSTNIG00000013463srek18143.750ENSCING00000022892-9843.890Ciona_intestinalis
ENSTNIG00000013463srek17043.885ENSCANG00000039796SRSF116540.201Colobus_angolensis_palliatus
ENSTNIG00000013463srek16978.214ENSCANG00000030421SREK18187.654Colobus_angolensis_palliatus
ENSTNIG00000013463srek17043.682ENSCGRG00001012043Srsf116239.950Cricetulus_griseus_chok1gshd
ENSTNIG00000013463srek16938.768ENSCSEG00000008551srsf115856.934Cynoglossus_semilaevis
ENSTNIG00000013463srek17043.321ENSCSEG00000010721-6638.776Cynoglossus_semilaevis
ENSTNIG00000013463srek16942.960ENSCVAG00000006934-6839.949Cyprinodon_variegatus
ENSTNIG00000013463srek16941.155ENSCVAG00000010634-6637.500Cyprinodon_variegatus
ENSTNIG00000013463srek16982.206ENSDARG00000009764srek17966.585Danio_rerio
ENSTNIG00000013463srek17043.525ENSDNOG00000008603SRSF116539.950Dasypus_novemcinctus
ENSTNIG00000013463srek17043.525ENSDORG00000000669Srsf116639.950Dipodomys_ordii
ENSTNIG00000013463srek16840.727FBgn0024285Srp548135.613Drosophila_melanogaster
ENSTNIG00000013463srek16944.161ENSEASG00005007847SRSF117868.539Equus_asinus_asinus
ENSTNIG00000013463srek17042.806ENSEEUG00000002456SRSF116439.589Erinaceus_europaeus
ENSTNIG00000013463srek16942.754ENSELUG00000023887srsf116139.665Esox_lucius
ENSTNIG00000013463srek16977.740ENSELUG00000008230srek17963.850Esox_lucius
ENSTNIG00000013463srek16943.273ENSELUG00000021268-6837.811Esox_lucius
ENSTNIG00000013463srek16879.004ENSFDAG00000017844SREK16565.432Fukomys_damarensis
ENSTNIG00000013463srek16942.960ENSFHEG00000003732SRSF116440.669Fundulus_heteroclitus
ENSTNIG00000013463srek16563.014ENSFHEG00000020971srek18466.438Fundulus_heteroclitus
ENSTNIG00000013463srek17042.086ENSGMOG00000002255-7037.940Gadus_morhua
ENSTNIG00000013463srek15875.000ENSGALG00000043541SREK18288.889Gallus_gallus
ENSTNIG00000013463srek16943.478ENSGALG00000011305SRSF115839.547Gallus_gallus
ENSTNIG00000013463srek16940.433ENSGAFG00000021415SRSF115639.896Gambusia_affinis
ENSTNIG00000013463srek17041.993ENSGACG00000017855-6837.406Gasterosteus_aculeatus
ENSTNIG00000013463srek16940.794ENSGACG00000009346srsf117137.245Gasterosteus_aculeatus
ENSTNIG00000013463srek19162.865ENSGAGG00000006087SREK16287.654Gopherus_agassizii
ENSTNIG00000013463srek17043.885ENSGGOG00000005774SRSF116540.201Gorilla_gorilla
ENSTNIG00000013463srek16978.214ENSGGOG00000004737SREK18187.654Gorilla_gorilla
ENSTNIG00000013463srek17043.525ENSHGLG00000008682SRSF116639.950Heterocephalus_glaber_female
ENSTNIG00000013463srek17043.060ENSHGLG00100018382SRSF116939.747Heterocephalus_glaber_male
ENSTNIG00000013463srek15373.810ENSHCOG00000017240SREK15383.429Hippocampus_comes
ENSTNIG00000013463srek16942.599ENSHCOG00000019035-6837.563Hippocampus_comes
ENSTNIG00000013463srek16983.154ENSIPUG00000016851srek15483.154Ictalurus_punctatus
ENSTNIG00000013463srek16879.004ENSSTOG00000008850SREK18187.654Ictidomys_tridecemlineatus
ENSTNIG00000013463srek17043.525ENSSTOG00000008675SRSF116639.950Ictidomys_tridecemlineatus
ENSTNIG00000013463srek17043.525ENSJJAG00000017238Srsf116839.950Jaculus_jaculus
ENSTNIG00000013463srek16938.989ENSKMAG00000009775srsf116736.111Kryptolebias_marmoratus
ENSTNIG00000013463srek16941.155ENSLBEG00000024167srsf118365.432Labrus_bergylta
ENSTNIG00000013463srek17043.165ENSLACG00000006575SRSF116939.949Latimeria_chalumnae
ENSTNIG00000013463srek16981.851ENSLOCG00000010547srek16070.081Lepisosteus_oculatus
ENSTNIG00000013463srek17540.328ENSLOCG00000009617srsf116540.617Lepisosteus_oculatus
ENSTNIG00000013463srek16879.004ENSLAFG00000013853SREK16765.122Loxodonta_africana
ENSTNIG00000013463srek17740.909ENSLAFG00000015882SRSF116938.035Loxodonta_africana
ENSTNIG00000013463srek17043.885ENSMFAG00000043405SRSF116540.201Macaca_fascicularis
ENSTNIG00000013463srek16978.214ENSMFAG00000039823SREK18187.654Macaca_fascicularis
ENSTNIG00000013463srek16978.214ENSMMUG00000014586SREK17587.805Macaca_mulatta
ENSTNIG00000013463srek17043.885ENSMMUG00000013852SRSF116740.201Macaca_mulatta
ENSTNIG00000013463srek16978.214ENSMNEG00000030723SREK18187.654Macaca_nemestrina
ENSTNIG00000013463srek17043.885ENSMNEG00000029428SRSF116540.201Macaca_nemestrina
ENSTNIG00000013463srek17043.885ENSMLEG00000041592SRSF116540.201Mandrillus_leucophaeus
ENSTNIG00000013463srek16978.214ENSMLEG00000039078SREK18187.654Mandrillus_leucophaeus
ENSTNIG00000013463srek16940.794ENSMAMG00000000369srsf116736.409Mastacembelus_armatus
ENSTNIG00000013463srek16943.636ENSMAMG00000015002-9362.136Mastacembelus_armatus
ENSTNIG00000013463srek16877.385ENSMAUG00000010066-5776.111Mesocricetus_auratus
ENSTNIG00000013463srek16944.203ENSMAUG00000008832Srsf116239.440Mesocricetus_auratus
ENSTNIG00000013463srek16878.136ENSMICG00000034959SREK18187.654Microcebus_murinus
ENSTNIG00000013463srek16877.739ENSMOCG00000001536-9459.868Microtus_ochrogaster
ENSTNIG00000013463srek17043.682ENSMOCG00000011388Srsf116239.950Microtus_ochrogaster
ENSTNIG00000013463srek16942.086ENSMMOG00000016751-9361.165Mola_mola
ENSTNIG00000013463srek16943.682ENSMALG00000020833-6938.084Monopterus_albus
ENSTNIG00000013463srek19970.492ENSMALG00000017086srek19492.857Monopterus_albus
ENSTNIG00000013463srek17043.682MGP_CAROLIEiJ_G0025767Srsf118670.930Mus_caroli
ENSTNIG00000013463srek17043.682ENSMUSG00000055436Srsf118570.930Mus_musculus
ENSTNIG00000013463srek17043.682MGP_PahariEiJ_G0027217Srsf118670.930Mus_pahari
ENSTNIG00000013463srek17043.682MGP_SPRETEiJ_G0026719Srsf118670.930Mus_spretus
ENSTNIG00000013463srek17043.525ENSMPUG00000000892SRSF116539.950Mustela_putorius_furo
ENSTNIG00000013463srek17041.727ENSMLUG00000026338-6638.481Myotis_lucifugus
ENSTNIG00000013463srek16843.750ENSMLUG00000006203-6639.250Myotis_lucifugus
ENSTNIG00000013463srek17043.525ENSNGAG00000010637Srsf116239.950Nannospalax_galili
ENSTNIG00000013463srek16978.214ENSNLEG00000003827SREK18187.654Nomascus_leucogenys
ENSTNIG00000013463srek17043.885ENSNLEG00000009400SRSF116640.201Nomascus_leucogenys
ENSTNIG00000013463srek16879.211ENSOPRG00000012111SREK15179.078Ochotona_princeps
ENSTNIG00000013463srek17043.525ENSODEG00000006289SRSF116739.950Octodon_degus
ENSTNIG00000013463srek18390.545ENSONIG00000011080srek19776.156Oreochromis_niloticus
ENSTNIG00000013463srek17043.525ENSOANG00000015528SRSF116839.698Ornithorhynchus_anatinus
ENSTNIG00000013463srek16177.600ENSOANG00000005029SREK15379.098Ornithorhynchus_anatinus
ENSTNIG00000013463srek17043.369ENSOCUG00000002001-6738.095Oryctolagus_cuniculus
ENSTNIG00000013463srek17043.369ENSOCUG00000024114-7339.447Oryctolagus_cuniculus
ENSTNIG00000013463srek17043.728ENSOCUG00000025440-7440.050Oryctolagus_cuniculus
ENSTNIG00000013463srek16879.570ENSOCUG00000001319SREK16465.764Oryctolagus_cuniculus
ENSTNIG00000013463srek16942.238ENSORLG00000007753srsf116737.688Oryzias_latipes
ENSTNIG00000013463srek16943.165ENSORLG00020009393-8959.804Oryzias_latipes_hni
ENSTNIG00000013463srek16942.238ENSORLG00020016204srsf116737.688Oryzias_latipes_hni
ENSTNIG00000013463srek16942.238ENSORLG00015011944srsf116737.688Oryzias_latipes_hsok
ENSTNIG00000013463srek16943.165ENSORLG00015009374-8959.804Oryzias_latipes_hsok
ENSTNIG00000013463srek17142.049ENSOMEG00000006172-6838.734Oryzias_melastigma
ENSTNIG00000013463srek16941.135ENSOMEG00000022450srsf116736.935Oryzias_melastigma
ENSTNIG00000013463srek17078.214ENSOMEG00000015817srek18767.980Oryzias_melastigma
ENSTNIG00000013463srek17043.369ENSOGAG00000003392SRSF116639.850Otolemur_garnettii
ENSTNIG00000013463srek17043.525ENSOARG00000011887SRSF116639.950Ovis_aries
ENSTNIG00000013463srek16878.495ENSOARG00000006005SREK16464.706Ovis_aries
ENSTNIG00000013463srek17043.885ENSPPAG00000036149SRSF116540.201Pan_paniscus
ENSTNIG00000013463srek16978.214ENSPPAG00000031605SREK19174.860Pan_paniscus
ENSTNIG00000013463srek17043.525ENSPPRG00000002720SRSF116539.950Panthera_pardus
ENSTNIG00000013463srek16877.419ENSPPRG00000024617SREK18185.185Panthera_pardus
ENSTNIG00000013463srek16877.419ENSPTIG00000006608SREK18185.185Panthera_tigris_altaica
ENSTNIG00000013463srek17043.885ENSPTRG00000000852SRSF116540.201Pan_troglodytes
ENSTNIG00000013463srek16978.214ENSPTRG00000016936SREK18187.654Pan_troglodytes
ENSTNIG00000013463srek17043.885ENSPANG00000018677SRSF116540.201Papio_anubis
ENSTNIG00000013463srek16978.214ENSPANG00000008953SREK18187.654Papio_anubis
ENSTNIG00000013463srek16985.106ENSPKIG00000025563srek17469.949Paramormyrops_kingsleyae
ENSTNIG00000013463srek16943.478ENSPSIG00000005152SRSF116739.196Pelodiscus_sinensis
ENSTNIG00000013463srek16944.203ENSPEMG00000014288Srsf116239.440Peromyscus_maniculatus_bairdii
ENSTNIG00000013463srek16877.739ENSPEMG00000024051-5876.111Peromyscus_maniculatus_bairdii
ENSTNIG00000013463srek17043.525ENSPCIG00000002083SRSF116539.950Phascolarctos_cinereus
ENSTNIG00000013463srek16941.155ENSPLAG00000015578srsf115064.463Poecilia_latipinna
ENSTNIG00000013463srek16071.315ENSPMEG00000006831srek16274.408Poecilia_mexicana
ENSTNIG00000013463srek16940.433ENSPREG00000009065SRSF116640.260Poecilia_reticulata
ENSTNIG00000013463srek17043.885ENSPPYG00000001245SRSF116540.201Pongo_abelii
ENSTNIG00000013463srek16843.542ENSPCOG00000025365SRSF116337.975Propithecus_coquereli
ENSTNIG00000013463srek16878.136ENSPCOG00000026230SREK18187.654Propithecus_coquereli
ENSTNIG00000013463srek17042.238ENSPVAG00000011918SRSF116539.043Pteropus_vampyrus
ENSTNIG00000013463srek16878.136ENSPVAG00000009763SREK16361.501Pteropus_vampyrus
ENSTNIG00000013463srek15762.500ENSPNYG00000007160srek18368.061Pundamilia_nyererei
ENSTNIG00000013463srek18076.347ENSPNAG00000004328srek17470.573Pygocentrus_nattereri
ENSTNIG00000013463srek17043.682ENSRNOG00000029592Srsf116239.950Rattus_norvegicus
ENSTNIG00000013463srek16878.136ENSRBIG00000033818SREK18187.654Rhinopithecus_bieti
ENSTNIG00000013463srek17043.885ENSRBIG00000042971SRSF116371.951Rhinopithecus_bieti
ENSTNIG00000013463srek16978.214ENSRROG00000017210SREK18187.654Rhinopithecus_roxellana
ENSTNIG00000013463srek17043.885ENSRROG00000039667SRSF116540.201Rhinopithecus_roxellana
ENSTNIG00000013463srek16878.136ENSSBOG00000031230SREK18187.654Saimiri_boliviensis_boliviensis
ENSTNIG00000013463srek17043.885ENSSBOG00000033461SRSF116371.951Saimiri_boliviensis_boliviensis
ENSTNIG00000013463srek17043.525ENSSHAG00000012111SRSF116939.950Sarcophilus_harrisii
ENSTNIG00000013463srek16942.960ENSSFOG00015014887srsf116837.879Scleropages_formosus
ENSTNIG00000013463srek16985.106ENSSFOG00015004995srek17868.496Scleropages_formosus
ENSTNIG00000013463srek17143.262ENSSMAG00000019897-6839.055Scophthalmus_maximus
ENSTNIG00000013463srek16939.716ENSSDUG00000004582SRSF116736.409Seriola_dumerili
ENSTNIG00000013463srek16941.281ENSSDUG00000018738-6739.646Seriola_dumerili
ENSTNIG00000013463srek16943.885ENSSLDG00000012105-9362.136Seriola_lalandi_dorsalis
ENSTNIG00000013463srek16943.682ENSSPUG00000016145SRSF116939.447Sphenodon_punctatus
ENSTNIG00000013463srek17076.655ENSSPUG00000016553SREK19077.936Sphenodon_punctatus
ENSTNIG00000013463srek16940.071ENSSPAG00000005684srsf116336.409Stegastes_partitus
ENSTNIG00000013463srek16942.960ENSSPAG00000016483-9452.991Stegastes_partitus
ENSTNIG00000013463srek16940.433ENSTRUG00000017369srsf115855.782Takifugu_rubripes
ENSTNIG00000013463srek16843.956ENSTTRG00000015054SRSF116339.793Tursiops_truncatus
ENSTNIG00000013463srek17043.525ENSUMAG00000006618SRSF117239.950Ursus_maritimus
ENSTNIG00000013463srek15977.273ENSVPAG00000008654SREK16362.842Vicugna_pacos
ENSTNIG00000013463srek16942.599ENSXETG00000012371SRSF116938.035Xenopus_tropicalis
ENSTNIG00000013463srek16974.257ENSXETG00000021460srek18360.789Xenopus_tropicalis
ENSTNIG00000013463srek16940.794ENSXMAG00000005502srsf116351.807Xiphophorus_maculatus
ENSTNIG00000013463srek16940.433ENSXMAG00000019180SRSF116360.000Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us