EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000013506 (Gene tree)
Gene ID: -
Gene Symbol: sbno1
Alias: -
Full Name: strawberry notch homolog 1 (Drosophila)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4552 bases
Position: chr4:4261535-4266086
Accession: ZDB-GENE-080522-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016501	ResIII	PF04851.15	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016714	-	2409	-	ENSTNIP00000016501	803 (aa)	-	H3D7L0

Gene Model

Click here to download ENSTNIG00000013506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000013506	sbno1	55	62.585	ENSTNIG00000000856	si:ch73-63e15.2	82	62.585

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013506	sbno1	99	71.252	ENSG00000139697	SBNO1	56	70.654	Homo_sapiens
ENSTNIG00000013506	sbno1	99	70.617	ENSAMEG00000015151	SBNO1	56	70.516	Ailuropoda_melanoleuca
ENSTNIG00000013506	sbno1	99	80.928	ENSACIG00000008088	sbno1	54	80.923	Amphilophus_citrinellus
ENSTNIG00000013506	sbno1	99	84.981	ENSAOCG00000014859	sbno1	56	84.577	Amphiprion_ocellaris
ENSTNIG00000013506	sbno1	99	84.981	ENSAPEG00000006069	sbno1	56	84.577	Amphiprion_percula
ENSTNIG00000013506	sbno1	99	86.717	ENSATEG00000006667	sbno1	57	86.177	Anabas_testudineus
ENSTNIG00000013506	sbno1	99	71.004	ENSAPLG00000015674	SBNO1	56	70.952	Anas_platyrhynchos
ENSTNIG00000013506	sbno1	99	71.375	ENSANAG00000029958	-	63	70.777	Aotus_nancymaae
ENSTNIG00000013506	sbno1	99	78.338	ENSACLG00000024913	sbno1	55	76.721	Astatotilapia_calliptera
ENSTNIG00000013506	sbno1	99	76.161	ENSAMXG00000019473	sbno1	56	76.779	Astyanax_mexicanus
ENSTNIG00000013506	sbno1	99	70.844	ENSBTAG00000020505	SBNO1	56	70.777	Bos_taurus
ENSTNIG00000013506	sbno1	99	71.375	ENSCJAG00000016599	SBNO1	97	70.077	Callithrix_jacchus
ENSTNIG00000013506	sbno1	99	70.632	ENSCAFG00000007503	SBNO1	57	70.530	Canis_familiaris
ENSTNIG00000013506	sbno1	99	70.632	ENSCAFG00020015363	SBNO1	57	69.877	Canis_lupus_dingo
ENSTNIG00000013506	sbno1	99	70.720	ENSCHIG00000008382	SBNO1	56	70.654	Capra_hircus
ENSTNIG00000013506	sbno1	99	70.632	ENSTSYG00000012749	SBNO1	58	69.045	Carlito_syrichta
ENSTNIG00000013506	sbno1	92	72.617	ENSCAPG00000000384	SBNO1	55	72.245	Cavia_aperea
ENSTNIG00000013506	sbno1	99	70.668	ENSCPOG00000008109	SBNO1	56	70.421	Cavia_porcellus
ENSTNIG00000013506	sbno1	99	71.375	ENSCCAG00000035316	SBNO1	58	70.777	Cebus_capucinus
ENSTNIG00000013506	sbno1	99	70.463	ENSCATG00000008239	SBNO1	53	73.475	Cercocebus_atys
ENSTNIG00000013506	sbno1	99	70.393	ENSCLAG00000008995	SBNO1	56	70.384	Chinchilla_lanigera
ENSTNIG00000013506	sbno1	99	68.859	ENSCHOG00000008814	SBNO1	56	68.765	Choloepus_hoffmanni
ENSTNIG00000013506	sbno1	99	70.559	ENSCPBG00000025968	SBNO1	58	70.384	Chrysemys_picta_bellii
ENSTNIG00000013506	sbno1	99	69.839	ENSCANG00000042688	-	57	68.881	Colobus_angolensis_palliatus
ENSTNIG00000013506	sbno1	99	70.984	ENSCGRG00001017470	Sbno1	56	70.632	Cricetulus_griseus_chok1gshd
ENSTNIG00000013506	sbno1	99	70.984	ENSCGRG00000004756	Sbno1	56	70.632	Cricetulus_griseus_crigri
ENSTNIG00000013506	sbno1	99	83.040	ENSCSEG00000011919	sbno1	57	83.021	Cynoglossus_semilaevis
ENSTNIG00000013506	sbno1	99	83.835	ENSCVAG00000007038	sbno1	57	83.935	Cyprinodon_variegatus
ENSTNIG00000013506	sbno1	99	76.981	ENSDARG00000099080	sbno1	56	76.654	Danio_rerio
ENSTNIG00000013506	sbno1	99	70.471	ENSDNOG00000017147	SBNO1	75	71.447	Dasypus_novemcinctus
ENSTNIG00000013506	sbno1	90	80.120	ENSDORG00000015261	Sbno1	54	79.880	Dipodomys_ordii
ENSTNIG00000013506	sbno1	99	63.648	ENSETEG00000005620	SBNO1	56	63.445	Echinops_telfairi
ENSTNIG00000013506	sbno1	99	58.984	ENSEBUG00000013823	sbno1	67	58.437	Eptatretus_burgeri
ENSTNIG00000013506	sbno1	90	71.547	ENSEASG00005012595	-	92	71.823	Equus_asinus_asinus
ENSTNIG00000013506	sbno1	99	70.880	ENSECAG00000006127	SBNO1	56	70.777	Equus_caballus
ENSTNIG00000013506	sbno1	99	79.349	ENSELUG00000002886	sbno1	57	78.315	Esox_lucius
ENSTNIG00000013506	sbno1	99	70.756	ENSFCAG00000015331	SBNO1	56	70.654	Felis_catus
ENSTNIG00000013506	sbno1	99	71.004	ENSFALG00000009273	SBNO1	56	71.075	Ficedula_albicollis
ENSTNIG00000013506	sbno1	99	70.307	ENSFDAG00000014232	SBNO1	57	70.407	Fukomys_damarensis
ENSTNIG00000013506	sbno1	99	83.061	ENSFHEG00000007360	sbno1	57	83.042	Fundulus_heteroclitus
ENSTNIG00000013506	sbno1	90	82.687	ENSGMOG00000018229	sbno1	54	82.231	Gadus_morhua
ENSTNIG00000013506	sbno1	99	71.056	ENSGALG00000003392	SBNO1	63	71.004	Gallus_gallus
ENSTNIG00000013506	sbno1	99	83.312	ENSGAFG00000003960	sbno1	57	83.292	Gambusia_affinis
ENSTNIG00000013506	sbno1	90	83.380	ENSGACG00000015633	sbno1	54	82.393	Gasterosteus_aculeatus
ENSTNIG00000013506	sbno1	99	69.565	ENSGAGG00000001065	SBNO1	63	69.393	Gopherus_agassizii
ENSTNIG00000013506	sbno1	99	71.252	ENSGGOG00000015000	SBNO1	56	70.654	Gorilla_gorilla
ENSTNIG00000013506	sbno1	99	78.086	ENSHBUG00000011910	sbno1	57	76.471	Haplochromis_burtoni
ENSTNIG00000013506	sbno1	99	70.807	ENSHGLG00000014165	-	56	70.247	Heterocephalus_glaber_female
ENSTNIG00000013506	sbno1	97	75.290	ENSHCOG00000003246	sbno1	56	76.598	Hippocampus_comes
ENSTNIG00000013506	sbno1	99	76.913	ENSIPUG00000015830	Sbno1	64	76.952	Ictalurus_punctatus
ENSTNIG00000013506	sbno1	99	70.632	ENSSTOG00000023221	SBNO1	56	70.407	Ictidomys_tridecemlineatus
ENSTNIG00000013506	sbno1	99	71.040	ENSJJAG00000001741	Sbno1	56	71.075	Jaculus_jaculus
ENSTNIG00000013506	sbno1	99	84.336	ENSKMAG00000009696	sbno1	57	84.807	Kryptolebias_marmoratus
ENSTNIG00000013506	sbno1	99	84.270	ENSLBEG00000007623	sbno1	57	84.367	Labrus_bergylta
ENSTNIG00000013506	sbno1	99	69.926	ENSLACG00000017227	SBNO1	63	70.370	Latimeria_chalumnae
ENSTNIG00000013506	sbno1	99	76.179	ENSLOCG00000005725	sbno1	55	76.296	Lepisosteus_oculatus
ENSTNIG00000013506	sbno1	99	70.260	ENSLAFG00000002135	SBNO1	56	70.160	Loxodonta_africana
ENSTNIG00000013506	sbno1	99	71.871	ENSMFAG00000031429	SBNO1	64	70.900	Macaca_fascicularis
ENSTNIG00000013506	sbno1	99	71.871	ENSMMUG00000011496	SBNO1	56	70.900	Macaca_mulatta
ENSTNIG00000013506	sbno1	99	70.260	ENSMLEG00000033260	SBNO1	63	69.383	Mandrillus_leucophaeus
ENSTNIG00000013506	sbno1	99	85.338	ENSMAMG00000005473	sbno1	57	85.056	Mastacembelus_armatus
ENSTNIG00000013506	sbno1	99	71.056	ENSMGAG00000003274	SBNO1	63	71.004	Meleagris_gallopavo
ENSTNIG00000013506	sbno1	88	72.394	ENSMAUG00000004834	-	99	72.535	Mesocricetus_auratus
ENSTNIG00000013506	sbno1	99	70.756	ENSMICG00000006573	-	99	69.451	Microcebus_murinus
ENSTNIG00000013506	sbno1	98	70.603	ENSMOCG00000009390	Sbno1	56	70.775	Microtus_ochrogaster
ENSTNIG00000013506	sbno1	99	77.792	ENSMMOG00000008691	sbno1	54	77.805	Mola_mola
ENSTNIG00000013506	sbno1	99	69.950	ENSMODG00000012470	SBNO1	55	70.050	Monodelphis_domestica
ENSTNIG00000013506	sbno1	99	85.430	ENSMALG00000001056	sbno1	57	84.845	Monopterus_albus
ENSTNIG00000013506	sbno1	99	70.984	MGP_CAROLIEiJ_G0027749	Sbno1	95	90.789	Mus_caroli
ENSTNIG00000013506	sbno1	99	71.252	ENSMUSG00000038095	Sbno1	94	90.789	Mus_musculus
ENSTNIG00000013506	sbno1	99	71.233	MGP_PahariEiJ_G0024329	Sbno1	95	90.789	Mus_pahari
ENSTNIG00000013506	sbno1	99	71.252	MGP_SPRETEiJ_G0028747	Sbno1	95	90.789	Mus_spretus
ENSTNIG00000013506	sbno1	99	70.880	ENSMPUG00000001658	SBNO1	56	70.777	Mustela_putorius_furo
ENSTNIG00000013506	sbno1	99	70.844	ENSMLUG00000017159	SBNO1	56	70.777	Myotis_lucifugus
ENSTNIG00000013506	sbno1	99	71.004	ENSNGAG00000012620	Sbno1	56	70.900	Nannospalax_galili
ENSTNIG00000013506	sbno1	99	80.227	ENSNBRG00000019189	sbno1	56	78.598	Neolamprologus_brichardi
ENSTNIG00000013506	sbno1	99	71.252	ENSNLEG00000001502	SBNO1	58	70.654	Nomascus_leucogenys
ENSTNIG00000013506	sbno1	90	64.011	ENSMEUG00000008768	-	76	64.060	Notamacropus_eugenii
ENSTNIG00000013506	sbno1	99	69.863	ENSOPRG00000011054	SBNO1	56	69.517	Ochotona_princeps
ENSTNIG00000013506	sbno1	99	71.163	ENSODEG00000009997	SBNO1	56	70.421	Octodon_degus
ENSTNIG00000013506	sbno1	99	83.730	ENSONIG00000015348	sbno1	57	83.478	Oreochromis_niloticus
ENSTNIG00000013506	sbno1	99	70.260	ENSOCUG00000002441	SBNO1	54	70.284	Oryctolagus_cuniculus
ENSTNIG00000013506	sbno1	99	82.353	ENSORLG00000001593	sbno1	58	82.981	Oryzias_latipes
ENSTNIG00000013506	sbno1	99	82.456	ENSORLG00020015216	sbno1	57	83.085	Oryzias_latipes_hni
ENSTNIG00000013506	sbno1	99	82.456	ENSORLG00015002726	sbno1	57	83.085	Oryzias_latipes_hsok
ENSTNIG00000013506	sbno1	99	82.161	ENSOMEG00000019313	sbno1	57	82.793	Oryzias_melastigma
ENSTNIG00000013506	sbno1	88	70.845	ENSOGAG00000010781	-	99	71.127	Otolemur_garnettii
ENSTNIG00000013506	sbno1	99	70.581	ENSOARG00000004404	SBNO1	56	70.480	Ovis_aries
ENSTNIG00000013506	sbno1	99	71.252	ENSPPAG00000024635	SBNO1	56	70.654	Pan_paniscus
ENSTNIG00000013506	sbno1	99	70.756	ENSPPRG00000022092	SBNO1	56	70.654	Panthera_pardus
ENSTNIG00000013506	sbno1	99	70.647	ENSPTIG00000017803	SBNO1	56	70.545	Panthera_tigris_altaica
ENSTNIG00000013506	sbno1	99	71.252	ENSPTRG00000005597	SBNO1	56	70.654	Pan_troglodytes
ENSTNIG00000013506	sbno1	99	71.499	ENSPANG00000011640	SBNO1	63	70.654	Papio_anubis
ENSTNIG00000013506	sbno1	99	75.280	ENSPKIG00000001441	sbno1	56	75.062	Paramormyrops_kingsleyae
ENSTNIG00000013506	sbno1	99	67.906	ENSPSIG00000009256	-	61	67.778	Pelodiscus_sinensis
ENSTNIG00000013506	sbno1	99	70.173	ENSPSIG00000009572	-	56	69.877	Pelodiscus_sinensis
ENSTNIG00000013506	sbno1	59	86.364	ENSPMGG00000017196	sbno1	85	86.364	Periophthalmus_magnuspinnatus
ENSTNIG00000013506	sbno1	99	70.859	ENSPEMG00000016087	Sbno1	56	70.384	Peromyscus_maniculatus_bairdii
ENSTNIG00000013506	sbno1	59	56.619	ENSPMAG00000007246	-	99	55.193	Petromyzon_marinus
ENSTNIG00000013506	sbno1	99	69.614	ENSPCIG00000010985	SBNO1	56	70.334	Phascolarctos_cinereus
ENSTNIG00000013506	sbno1	99	83.689	ENSPFOG00000005069	sbno1	57	83.666	Poecilia_formosa
ENSTNIG00000013506	sbno1	99	83.689	ENSPLAG00000015015	sbno1	57	83.666	Poecilia_latipinna
ENSTNIG00000013506	sbno1	99	83.438	ENSPMEG00000021212	sbno1	57	83.416	Poecilia_mexicana
ENSTNIG00000013506	sbno1	99	82.685	ENSPREG00000017746	sbno1	57	82.668	Poecilia_reticulata
ENSTNIG00000013506	sbno1	99	70.968	ENSPPYG00000005084	SBNO1	56	70.370	Pongo_abelii
ENSTNIG00000013506	sbno1	93	67.952	ENSPCAG00000008634	SBNO1	52	67.952	Procavia_capensis
ENSTNIG00000013506	sbno1	99	70.756	ENSPCOG00000024277	SBNO1	56	70.654	Propithecus_coquereli
ENSTNIG00000013506	sbno1	90	68.579	ENSPVAG00000015304	SBNO1	51	68.579	Pteropus_vampyrus
ENSTNIG00000013506	sbno1	99	84.818	ENSPNYG00000004291	sbno1	57	83.686	Pundamilia_nyererei
ENSTNIG00000013506	sbno1	99	75.845	ENSPNAG00000015622	sbno1	56	74.969	Pygocentrus_nattereri
ENSTNIG00000013506	sbno1	99	70.859	ENSRNOG00000001064	Sbno1	63	70.384	Rattus_norvegicus
ENSTNIG00000013506	sbno1	99	71.623	ENSRROG00000034230	SBNO1	56	70.900	Rhinopithecus_roxellana
ENSTNIG00000013506	sbno1	93	70.861	ENSSBOG00000015422	SBNO1	55	70.224	Saimiri_boliviensis_boliviensis
ENSTNIG00000013506	sbno1	99	76.808	ENSSFOG00015019025	sbno1	56	76.055	Scleropages_formosus
ENSTNIG00000013506	sbno1	99	86.541	ENSSMAG00000013640	sbno1	57	86.500	Scophthalmus_maximus
ENSTNIG00000013506	sbno1	99	86.090	ENSSDUG00000023480	sbno1	57	85.803	Seriola_dumerili
ENSTNIG00000013506	sbno1	99	86.090	ENSSLDG00000007928	sbno1	57	85.803	Seriola_lalandi_dorsalis
ENSTNIG00000013506	sbno1	99	69.375	ENSSPUG00000012640	SBNO1	55	69.451	Sphenodon_punctatus
ENSTNIG00000013506	sbno1	99	86.483	ENSSPAG00000016244	sbno1	57	86.070	Stegastes_partitus
ENSTNIG00000013506	sbno1	99	70.361	ENSSSCG00000009776	SBNO1	57	70.173	Sus_scrofa
ENSTNIG00000013506	sbno1	99	70.880	ENSTGUG00000005380	SBNO1	56	71.075	Taeniopygia_guttata
ENSTNIG00000013506	sbno1	99	90.841	ENSTRUG00000018490	sbno1	57	90.773	Takifugu_rubripes
ENSTNIG00000013506	sbno1	99	70.756	ENSUAMG00000019671	SBNO1	56	70.654	Ursus_americanus
ENSTNIG00000013506	sbno1	99	70.756	ENSUMAG00000004002	SBNO1	56	70.654	Ursus_maritimus
ENSTNIG00000013506	sbno1	99	66.543	ENSVPAG00000007024	SBNO1	56	66.461	Vicugna_pacos
ENSTNIG00000013506	sbno1	99	70.632	ENSVVUG00000027807	SBNO1	56	70.530	Vulpes_vulpes
ENSTNIG00000013506	sbno1	99	66.378	ENSXETG00000031930	SBNO1	87	78.862	Xenopus_tropicalis
ENSTNIG00000013506	sbno1	99	82.642	ENSXCOG00000011607	sbno1	94	80.888	Xiphophorus_couchianus
ENSTNIG00000013506	sbno1	99	83.333	ENSXMAG00000002140	sbno1	57	83.292	Xiphophorus_maculatus