EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013770 (Gene tree)
Gene ID: -
Gene Symbol: si:ch73-14h10.2
Alias: wu:fe48h10|zgc:101795
Full Name: si:ch73-14h10.2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1128 bases
Position: chr1:10520603-10521730
Accession: ZDB-GENE-141222-67
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016772	LSM	PF01423.22	5.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000016986	-	201	-	ENSTNIP00000016772	67 (aa)	-	H3D8D1

Gene Model

Click here to download ENSTNIG00000013770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSG00000204392	LSM2	69	95.455	Homo_sapiens
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSAPOG00000017967	si:ch73-14h10.2	69	95.455	Acanthochromis_polyacanthus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSAMEG00000006483	LSM2	70	95.455	Ailuropoda_melanoleuca
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSAOCG00000006949	si:ch73-14h10.2	55	95.522	Amphiprion_ocellaris
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSAPEG00000020375	si:ch73-14h10.2	62	95.522	Amphiprion_percula
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSATEG00000011376	si:ch73-14h10.2	69	95.455	Anabas_testudineus
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSACAG00000017281	LSM2	64	95.522	Anolis_carolinensis
ENSTNIG00000013770	si:ch73-14h10.2	93	74.194	ENSANAG00000028033	-	65	74.194	Aotus_nancymaae
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSANAG00000028372	LSM2	69	95.455	Aotus_nancymaae
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSACLG00000024717	smx5	69	95.455	Astatotilapia_calliptera
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSAMXG00000036868	si:ch73-14h10.2	69	95.455	Astyanax_mexicanus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSBTAG00000005634	LSM2	69	95.455	Bos_taurus
ENSTNIG00000013770	si:ch73-14h10.2	99	84.848	WBGene00001808	gut-2	68	84.848	Caenorhabditis_elegans
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCJAG00000040899	LSM2	69	95.455	Callithrix_jacchus
ENSTNIG00000013770	si:ch73-14h10.2	64	93.023	ENSCAFG00020016978	-	53	93.023	Canis_lupus_dingo
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCHIG00000016153	LSM2	70	95.455	Capra_hircus
ENSTNIG00000013770	si:ch73-14h10.2	99	92.424	ENSTSYG00000030015	-	70	92.424	Carlito_syrichta
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSTSYG00000034844	LSM2	69	95.455	Carlito_syrichta
ENSTNIG00000013770	si:ch73-14h10.2	66	93.182	ENSCAPG00000009970	LSM2	56	93.182	Cavia_aperea
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCPOG00000021053	LSM2	69	95.455	Cavia_porcellus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCCAG00000024276	LSM2	69	95.455	Cebus_capucinus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCATG00000013737	LSM2	69	95.455	Cercocebus_atys
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCLAG00000008081	LSM2	69	95.455	Chinchilla_lanigera
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCSAG00000008800	LSM2	69	95.455	Chlorocebus_sabaeus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCHOG00000007702	LSM2	69	95.455	Choloepus_hoffmanni
ENSTNIG00000013770	si:ch73-14h10.2	99	93.939	ENSCING00000022677	-	69	93.939	Ciona_intestinalis
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCANG00000039576	LSM2	69	95.455	Colobus_angolensis_palliatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCGRG00001013932	Lsm2	69	95.455	Cricetulus_griseus_chok1gshd
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSCSEG00000002911	si:ch73-14h10.2	69	95.455	Cynoglossus_semilaevis
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSCVAG00000015394	si:ch73-14h10.2	63	95.522	Cyprinodon_variegatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSDARG00000070867	smx5	69	95.455	Danio_rerio
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSDNOG00000002633	LSM2	70	95.455	Dasypus_novemcinctus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSDORG00000026571	Lsm2	69	95.455	Dipodomys_ordii
ENSTNIG00000013770	si:ch73-14h10.2	99	92.424	FBgn0036277	CG10418	69	92.424	Drosophila_melanogaster
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSEASG00005015670	LSM2	55	95.455	Equus_asinus_asinus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSECAG00000018791	LSM2	55	95.455	Equus_caballus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSELUG00000008241	smx5	69	95.455	Esox_lucius
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSFCAG00000045887	LSM2	69	95.455	Felis_catus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSFDAG00000000390	LSM2	69	95.455	Fukomys_damarensis
ENSTNIG00000013770	si:ch73-14h10.2	99	91.176	ENSFHEG00000009619	si:ch73-14h10.2	71	91.176	Fundulus_heteroclitus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSGMOG00000019208	si:ch73-14h10.2	70	95.455	Gadus_morhua
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSGAFG00000017286	si:ch73-14h10.2	69	95.455	Gambusia_affinis
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSGACG00000003827	si:ch73-14h10.2	69	95.455	Gasterosteus_aculeatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSGAGG00000012458	LSM2	69	95.455	Gopherus_agassizii
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSGGOG00000011383	LSM2	69	95.455	Gorilla_gorilla
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSHGLG00000011299	LSM2	69	95.455	Heterocephalus_glaber_female
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSHGLG00100017194	LSM2	69	95.455	Heterocephalus_glaber_male
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSHCOG00000014057	si:ch73-14h10.2	69	95.455	Hippocampus_comes
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSIPUG00000010539	lsm2	69	95.455	Ictalurus_punctatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSTOG00000013144	LSM2	69	95.455	Ictidomys_tridecemlineatus
ENSTNIG00000013770	si:ch73-14h10.2	91	62.295	ENSJJAG00000019477	-	59	62.295	Jaculus_jaculus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSKMAG00000014909	si:ch73-14h10.2	69	95.455	Kryptolebias_marmoratus
ENSTNIG00000013770	si:ch73-14h10.2	100	94.030	ENSLBEG00000025781	si:ch73-14h10.2	69	94.030	Labrus_bergylta
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSLACG00000015064	LSM2	69	95.455	Latimeria_chalumnae
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSLOCG00000005228	si:ch73-14h10.2	69	95.455	Lepisosteus_oculatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSLAFG00000016139	LSM2	70	95.455	Loxodonta_africana
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMFAG00000001016	LSM2	69	95.455	Macaca_fascicularis
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMMUG00000006832	LSM2	69	95.455	Macaca_mulatta
ENSTNIG00000013770	si:ch73-14h10.2	99	81.818	ENSMMUG00000045473	-	66	81.818	Macaca_mulatta
ENSTNIG00000013770	si:ch73-14h10.2	70	87.234	ENSMNEG00000040973	-	57	87.234	Macaca_nemestrina
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMNEG00000045355	LSM2	69	95.455	Macaca_nemestrina
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMLEG00000037369	-	69	95.455	Mandrillus_leucophaeus
ENSTNIG00000013770	si:ch73-14h10.2	99	80.303	ENSMLEG00000031181	-	66	80.303	Mandrillus_leucophaeus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMAMG00000010053	si:ch73-14h10.2	51	95.455	Mastacembelus_armatus
ENSTNIG00000013770	si:ch73-14h10.2	99	92.647	ENSMZEG00005008688	si:ch73-14h10.2	71	92.647	Maylandia_zebra
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMAUG00000021966	Lsm2	69	95.455	Mesocricetus_auratus
ENSTNIG00000013770	si:ch73-14h10.2	66	70.455	ENSMICG00000046764	-	59	70.455	Microcebus_murinus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMOCG00000015306	Lsm2	69	95.455	Microtus_ochrogaster
ENSTNIG00000013770	si:ch73-14h10.2	99	93.939	ENSMMOG00000005603	si:ch73-14h10.2	70	93.939	Mola_mola
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSMODG00000015177	LSM2	71	95.522	Monodelphis_domestica
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMALG00000016490	si:ch73-14h10.2	69	95.455	Monopterus_albus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	MGP_CAROLIEiJ_G0021490	Lsm2	69	95.455	Mus_caroli
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSMUSG00000007050	Lsm2	69	95.455	Mus_musculus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	MGP_PahariEiJ_G0020485	Lsm2	69	95.455	Mus_pahari
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	MGP_SPRETEiJ_G0022395	Lsm2	69	95.455	Mus_spretus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSNGAG00000003997	Lsm2	69	95.455	Nannospalax_galili
ENSTNIG00000013770	si:ch73-14h10.2	99	92.647	ENSNBRG00000012904	si:ch73-14h10.2	71	92.647	Neolamprologus_brichardi
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSNLEG00000035542	LSM2	69	95.455	Nomascus_leucogenys
ENSTNIG00000013770	si:ch73-14h10.2	64	93.023	ENSMEUG00000003419	LSM2	61	93.023	Notamacropus_eugenii
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSOPRG00000003668	LSM2	69	95.455	Ochotona_princeps
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSODEG00000017583	LSM2	69	95.455	Octodon_degus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSONIG00000019321	si:ch73-14h10.2	69	95.455	Oreochromis_niloticus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSOANG00000005398	LSM2	70	95.455	Ornithorhynchus_anatinus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSOCUG00000002583	LSM2	69	95.455	Oryctolagus_cuniculus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSORLG00000029858	si:ch73-14h10.2	69	95.455	Oryzias_latipes
ENSTNIG00000013770	si:ch73-14h10.2	99	66.316	ENSORLG00015000465	si:ch73-14h10.2	77	66.316	Oryzias_latipes_hsok
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSOMEG00000002892	si:ch73-14h10.2	69	95.455	Oryzias_melastigma
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSOARG00000004575	LSM2	70	95.455	Ovis_aries
ENSTNIG00000013770	si:ch73-14h10.2	70	85.106	ENSPPAG00000043941	-	58	85.106	Pan_paniscus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPPAG00000032431	LSM2	69	95.455	Pan_paniscus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPPRG00000015353	LSM2	69	95.455	Panthera_pardus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPTIG00000010303	LSM2	69	95.455	Panthera_tigris_altaica
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPTRG00000017986	LSM2	69	95.455	Pan_troglodytes
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPANG00000024577	LSM2	69	95.455	Papio_anubis
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPKIG00000007028	si:ch73-14h10.2	69	95.455	Paramormyrops_kingsleyae
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSPSIG00000004458	LSM2	56	95.522	Pelodiscus_sinensis
ENSTNIG00000013770	si:ch73-14h10.2	99	92.424	ENSPMGG00000018511	si:ch73-14h10.2	70	92.424	Periophthalmus_magnuspinnatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPCIG00000018560	-	67	95.455	Phascolarctos_cinereus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPFOG00000001621	si:ch73-14h10.2	69	95.455	Poecilia_formosa
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPLAG00000017165	si:ch73-14h10.2	69	95.455	Poecilia_latipinna
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPMEG00000019574	si:ch73-14h10.2	69	95.455	Poecilia_mexicana
ENSTNIG00000013770	si:ch73-14h10.2	99	93.939	ENSPREG00000016534	si:ch73-14h10.2	70	93.939	Poecilia_reticulata
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPCAG00000013737	LSM2	69	95.455	Procavia_capensis
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPCOG00000020134	LSM2	69	95.455	Propithecus_coquereli
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPVAG00000012405	LSM2	69	95.455	Pteropus_vampyrus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPNYG00000019298	smx5	69	95.455	Pundamilia_nyererei
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSPNAG00000027769	si:ch73-14h10.2	69	95.455	Pygocentrus_nattereri
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSRNOG00000048725	Lsm2	69	95.455	Rattus_norvegicus
ENSTNIG00000013770	si:ch73-14h10.2	79	92.453	ENSRNOG00000011065	AC126899.1	76	92.453	Rattus_norvegicus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSRBIG00000010172	LSM2	69	95.455	Rhinopithecus_bieti
ENSTNIG00000013770	si:ch73-14h10.2	70	89.362	ENSRBIG00000011356	-	57	89.362	Rhinopithecus_bieti
ENSTNIG00000013770	si:ch73-14h10.2	70	89.362	ENSRROG00000030708	-	57	89.362	Rhinopithecus_roxellana
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSRROG00000030345	LSM2	69	95.455	Rhinopithecus_roxellana
ENSTNIG00000013770	si:ch73-14h10.2	99	66.667	YBL026W	LSM2	69	66.667	Saccharomyces_cerevisiae
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSBOG00000018943	LSM2	69	95.455	Saimiri_boliviensis_boliviensis
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSFOG00015006734	lsm2	69	95.455	Scleropages_formosus
ENSTNIG00000013770	si:ch73-14h10.2	100	95.522	ENSSMAG00000001122	si:ch73-14h10.2	69	95.455	Scophthalmus_maximus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSDUG00000021605	smx5	69	95.455	Seriola_dumerili
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSLDG00000002765	si:ch73-14h10.2	69	95.455	Seriola_lalandi_dorsalis
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSPUG00000009631	LSM2	69	95.455	Sphenodon_punctatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSPAG00000016904	si:ch73-14h10.2	69	95.455	Stegastes_partitus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSSSCG00000039021	LSM2	69	95.455	Sus_scrofa
ENSTNIG00000013770	si:ch73-14h10.2	99	93.939	ENSTRUG00000002093	si:ch73-14h10.2	70	93.939	Takifugu_rubripes
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSTTRG00000014131	LSM2	69	95.455	Tursiops_truncatus
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSVPAG00000001761	LSM2	70	95.455	Vicugna_pacos
ENSTNIG00000013770	si:ch73-14h10.2	70	93.617	ENSVVUG00000016264	-	58	93.617	Vulpes_vulpes
ENSTNIG00000013770	si:ch73-14h10.2	99	95.455	ENSXETG00000024077	lsm2	69	95.455	Xenopus_tropicalis
ENSTNIG00000013770	si:ch73-14h10.2	99	93.939	ENSXCOG00000006078	si:ch73-14h10.2	70	93.939	Xiphophorus_couchianus
ENSTNIG00000013770	si:ch73-14h10.2	99	93.939	ENSXMAG00000028018	si:ch73-14h10.2	70	93.939	Xiphophorus_maculatus