EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013811 (Gene tree)
Gene ID: -
Gene Symbol: cstf3
Alias: cleavage stimulation factor|3 pre-RNA|subunit 3|wu:fa99c02|wu:fb18b09|zgc:56028
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 3
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6624 bases
Position: chr5:4331374-4337997
Accession: ZDB-GENE-040426-1997
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016813	Suf	PF05843.14	9.3e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017027	-	2154	-	ENSTNIP00000016813	717 (aa)	-	H3D8H2

Gene Model

Click here to download ENSTNIG00000013811's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013811's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013811	cstf3	99	90.704	ENSG00000176102	CSTF3	99	90.704	Homo_sapiens
ENSTNIG00000013811	cstf3	99	97.316	ENSAPOG00000014054	cstf3	99	97.316	Acanthochromis_polyacanthus
ENSTNIG00000013811	cstf3	99	90.436	ENSAMEG00000007187	CSTF3	99	90.436	Ailuropoda_melanoleuca
ENSTNIG00000013811	cstf3	87	92.308	ENSACIG00000005539	cstf3	100	92.308	Amphilophus_citrinellus
ENSTNIG00000013811	cstf3	99	97.034	ENSAOCG00000010930	cstf3	99	97.034	Amphiprion_ocellaris
ENSTNIG00000013811	cstf3	99	97.034	ENSAPEG00000007903	cstf3	99	97.034	Amphiprion_percula
ENSTNIG00000013811	cstf3	99	97.316	ENSATEG00000000190	cstf3	99	97.316	Anabas_testudineus
ENSTNIG00000013811	cstf3	98	90.819	ENSAPLG00000007217	CSTF3	100	90.819	Anas_platyrhynchos
ENSTNIG00000013811	cstf3	98	91.102	ENSACAG00000002823	CSTF3	99	91.102	Anolis_carolinensis
ENSTNIG00000013811	cstf3	99	90.704	ENSANAG00000020699	CSTF3	100	90.400	Aotus_nancymaae
ENSTNIG00000013811	cstf3	99	96.610	ENSACLG00000007820	cstf3	99	96.610	Astatotilapia_calliptera
ENSTNIG00000013811	cstf3	98	92.655	ENSAMXG00000014198	cstf3	99	92.938	Astyanax_mexicanus
ENSTNIG00000013811	cstf3	99	90.704	ENSBTAG00000008617	CSTF3	100	90.801	Bos_taurus
ENSTNIG00000013811	cstf3	97	47.945	WBGene00006307	suf-1	99	47.945	Caenorhabditis_elegans
ENSTNIG00000013811	cstf3	99	90.704	ENSCJAG00000005533	CSTF3	100	90.400	Callithrix_jacchus
ENSTNIG00000013811	cstf3	99	90.704	ENSCAFG00000007264	CSTF3	99	90.704	Canis_familiaris
ENSTNIG00000013811	cstf3	98	90.960	ENSCAFG00020002715	CSTF3	98	90.960	Canis_lupus_dingo
ENSTNIG00000013811	cstf3	98	89.616	ENSCHIG00000016418	CSTF3	100	90.400	Capra_hircus
ENSTNIG00000013811	cstf3	98	91.243	ENSTSYG00000000451	CSTF3	99	95.768	Carlito_syrichta
ENSTNIG00000013811	cstf3	83	87.915	ENSCAPG00000010958	CSTF3	98	87.915	Cavia_aperea
ENSTNIG00000013811	cstf3	99	90.563	ENSCPOG00000005545	CSTF3	99	90.819	Cavia_porcellus
ENSTNIG00000013811	cstf3	99	90.704	ENSCCAG00000024790	CSTF3	97	94.518	Cebus_capucinus
ENSTNIG00000013811	cstf3	99	90.704	ENSCATG00000007080	CSTF3	100	90.400	Cercocebus_atys
ENSTNIG00000013811	cstf3	99	90.704	ENSCLAG00000016179	CSTF3	99	90.704	Chinchilla_lanigera
ENSTNIG00000013811	cstf3	78	96.992	ENSCHOG00000002497	CSTF3	79	96.992	Choloepus_hoffmanni
ENSTNIG00000013811	cstf3	98	90.819	ENSCPBG00000006753	CSTF3	99	90.819	Chrysemys_picta_bellii
ENSTNIG00000013811	cstf3	99	61.250	ENSCING00000006401	-	99	61.389	Ciona_intestinalis
ENSTNIG00000013811	cstf3	98	61.463	ENSCSAVG00000004851	-	100	61.463	Ciona_savignyi
ENSTNIG00000013811	cstf3	99	90.704	ENSCANG00000035468	CSTF3	100	90.400	Colobus_angolensis_palliatus
ENSTNIG00000013811	cstf3	99	90.563	ENSCGRG00001014773	Cstf3	99	90.819	Cricetulus_griseus_chok1gshd
ENSTNIG00000013811	cstf3	99	90.563	ENSCGRG00000004142	Cstf3	99	90.819	Cricetulus_griseus_crigri
ENSTNIG00000013811	cstf3	98	96.317	ENSCSEG00000014283	cstf3	99	96.317	Cynoglossus_semilaevis
ENSTNIG00000013811	cstf3	99	96.186	ENSCVAG00000019739	cstf3	99	96.186	Cyprinodon_variegatus
ENSTNIG00000013811	cstf3	98	94.059	ENSDARG00000018904	cstf3	99	94.059	Danio_rerio
ENSTNIG00000013811	cstf3	98	90.960	ENSDNOG00000007366	CSTF3	99	90.960	Dasypus_novemcinctus
ENSTNIG00000013811	cstf3	98	83.498	ENSDORG00000005898	Cstf3	99	83.498	Dipodomys_ordii
ENSTNIG00000013811	cstf3	98	58.011	FBgn0003559	su(f)	98	58.011	Drosophila_melanogaster
ENSTNIG00000013811	cstf3	89	85.047	ENSETEG00000017097	CSTF3	90	85.047	Echinops_telfairi
ENSTNIG00000013811	cstf3	84	74.627	ENSEBUG00000015459	cstf3	96	74.627	Eptatretus_burgeri
ENSTNIG00000013811	cstf3	97	91.143	ENSEASG00005019884	CSTF3	96	95.768	Equus_asinus_asinus
ENSTNIG00000013811	cstf3	97	91.143	ENSECAG00000023338	CSTF3	96	95.768	Equus_caballus
ENSTNIG00000013811	cstf3	99	85.775	ENSEEUG00000015167	CSTF3	99	85.775	Erinaceus_europaeus
ENSTNIG00000013811	cstf3	99	94.358	ENSELUG00000023393	cstf3	99	94.358	Esox_lucius
ENSTNIG00000013811	cstf3	99	90.845	ENSFCAG00000030711	CSTF3	99	90.845	Felis_catus
ENSTNIG00000013811	cstf3	94	91.407	ENSFALG00000010764	CSTF3	100	89.555	Ficedula_albicollis
ENSTNIG00000013811	cstf3	99	90.845	ENSFDAG00000012082	CSTF3	99	90.845	Fukomys_damarensis
ENSTNIG00000013811	cstf3	99	95.904	ENSFHEG00000020623	cstf3	99	95.904	Fundulus_heteroclitus
ENSTNIG00000013811	cstf3	99	93.803	ENSGMOG00000012275	cstf3	99	93.803	Gadus_morhua
ENSTNIG00000013811	cstf3	99	90.563	ENSGALG00000011685	CSTF3	99	90.563	Gallus_gallus
ENSTNIG00000013811	cstf3	99	96.469	ENSGAFG00000002181	cstf3	99	96.469	Gambusia_affinis
ENSTNIG00000013811	cstf3	99	96.751	ENSGACG00000015997	cstf3	99	96.751	Gasterosteus_aculeatus
ENSTNIG00000013811	cstf3	98	90.819	ENSGAGG00000006200	CSTF3	99	90.819	Gopherus_agassizii
ENSTNIG00000013811	cstf3	99	84.615	ENSGGOG00000026591	CSTF3	97	89.693	Gorilla_gorilla
ENSTNIG00000013811	cstf3	99	96.469	ENSHBUG00000016656	cstf3	99	96.469	Haplochromis_burtoni
ENSTNIG00000013811	cstf3	99	90.563	ENSHGLG00000017834	CSTF3	99	90.563	Heterocephalus_glaber_female
ENSTNIG00000013811	cstf3	99	90.563	ENSHGLG00100018042	CSTF3	99	90.819	Heterocephalus_glaber_male
ENSTNIG00000013811	cstf3	98	92.898	ENSHCOG00000015218	cstf3	99	92.655	Hippocampus_comes
ENSTNIG00000013811	cstf3	98	93.211	ENSIPUG00000013170	CSTF3	99	93.211	Ictalurus_punctatus
ENSTNIG00000013811	cstf3	99	90.704	ENSSTOG00000013306	CSTF3	99	90.704	Ictidomys_tridecemlineatus
ENSTNIG00000013811	cstf3	98	81.073	ENSJJAG00000018430	Cstf3	98	81.073	Jaculus_jaculus
ENSTNIG00000013811	cstf3	99	95.198	ENSKMAG00000010916	cstf3	99	95.198	Kryptolebias_marmoratus
ENSTNIG00000013811	cstf3	99	96.610	ENSLBEG00000002306	cstf3	99	96.610	Labrus_bergylta
ENSTNIG00000013811	cstf3	99	89.859	ENSLACG00000017296	CSTF3	99	89.859	Latimeria_chalumnae
ENSTNIG00000013811	cstf3	98	94.350	ENSLOCG00000004415	cstf3	99	94.350	Lepisosteus_oculatus
ENSTNIG00000013811	cstf3	99	90.704	ENSLAFG00000008712	CSTF3	99	90.704	Loxodonta_africana
ENSTNIG00000013811	cstf3	99	90.704	ENSMFAG00000029516	CSTF3	100	90.400	Macaca_fascicularis
ENSTNIG00000013811	cstf3	99	90.704	ENSMMUG00000002542	CSTF3	99	90.704	Macaca_mulatta
ENSTNIG00000013811	cstf3	99	90.704	ENSMNEG00000021807	CSTF3	100	90.400	Macaca_nemestrina
ENSTNIG00000013811	cstf3	99	90.704	ENSMLEG00000039594	CSTF3	97	93.541	Mandrillus_leucophaeus
ENSTNIG00000013811	cstf3	99	96.765	ENSMAMG00000020423	cstf3	99	96.765	Mastacembelus_armatus
ENSTNIG00000013811	cstf3	99	96.610	ENSMZEG00005012082	cstf3	99	96.610	Maylandia_zebra
ENSTNIG00000013811	cstf3	99	90.563	ENSMGAG00000001383	CSTF3	99	90.563	Meleagris_gallopavo
ENSTNIG00000013811	cstf3	99	90.563	ENSMAUG00000002487	Cstf3	99	90.563	Mesocricetus_auratus
ENSTNIG00000013811	cstf3	99	90.704	ENSMICG00000004784	CSTF3	100	90.400	Microcebus_murinus
ENSTNIG00000013811	cstf3	99	90.563	ENSMOCG00000017583	Cstf3	99	90.563	Microtus_ochrogaster
ENSTNIG00000013811	cstf3	100	96.792	ENSMMOG00000016026	cstf3	96	96.792	Mola_mola
ENSTNIG00000013811	cstf3	98	80.481	ENSMODG00000025205	-	99	80.481	Monodelphis_domestica
ENSTNIG00000013811	cstf3	99	90.986	ENSMODG00000009745	-	99	90.986	Monodelphis_domestica
ENSTNIG00000013811	cstf3	99	96.751	ENSMALG00000012050	cstf3	99	96.751	Monopterus_albus
ENSTNIG00000013811	cstf3	99	90.563	MGP_CAROLIEiJ_G0024026	Cstf3	99	90.563	Mus_caroli
ENSTNIG00000013811	cstf3	99	90.563	ENSMUSG00000027176	Cstf3	99	90.563	Mus_musculus
ENSTNIG00000013811	cstf3	99	90.563	MGP_PahariEiJ_G0025464	Cstf3	99	90.563	Mus_pahari
ENSTNIG00000013811	cstf3	99	90.563	MGP_SPRETEiJ_G0024939	Cstf3	99	90.563	Mus_spretus
ENSTNIG00000013811	cstf3	99	90.563	ENSMPUG00000011457	CSTF3	99	90.563	Mustela_putorius_furo
ENSTNIG00000013811	cstf3	99	88.169	ENSMLUG00000026022	-	99	88.169	Myotis_lucifugus
ENSTNIG00000013811	cstf3	98	90.960	ENSMLUG00000003073	-	99	90.960	Myotis_lucifugus
ENSTNIG00000013811	cstf3	99	90.550	ENSNGAG00000010677	Cstf3	99	90.550	Nannospalax_galili
ENSTNIG00000013811	cstf3	87	96.790	ENSNBRG00000007345	cstf3	100	96.790	Neolamprologus_brichardi
ENSTNIG00000013811	cstf3	99	90.704	ENSNLEG00000017901	CSTF3	100	90.400	Nomascus_leucogenys
ENSTNIG00000013811	cstf3	73	89.866	ENSMEUG00000005640	-	100	89.866	Notamacropus_eugenii
ENSTNIG00000013811	cstf3	66	91.176	ENSOPRG00000000199	-	66	91.176	Ochotona_princeps
ENSTNIG00000013811	cstf3	88	79.088	ENSODEG00000006311	-	97	79.088	Octodon_degus
ENSTNIG00000013811	cstf3	99	90.845	ENSODEG00000016737	-	99	90.845	Octodon_degus
ENSTNIG00000013811	cstf3	99	96.610	ENSONIG00000005563	cstf3	99	96.610	Oreochromis_niloticus
ENSTNIG00000013811	cstf3	90	89.846	ENSOANG00000015140	CSTF3	100	89.846	Ornithorhynchus_anatinus
ENSTNIG00000013811	cstf3	99	90.563	ENSOCUG00000015417	CSTF3	99	90.563	Oryctolagus_cuniculus
ENSTNIG00000013811	cstf3	98	95.319	ENSORLG00000009762	cstf3	99	95.319	Oryzias_latipes
ENSTNIG00000013811	cstf3	98	95.319	ENSORLG00020005540	cstf3	99	95.319	Oryzias_latipes_hni
ENSTNIG00000013811	cstf3	98	95.177	ENSORLG00015003551	cstf3	99	95.177	Oryzias_latipes_hsok
ENSTNIG00000013811	cstf3	98	96.028	ENSOMEG00000003848	cstf3	99	96.028	Oryzias_melastigma
ENSTNIG00000013811	cstf3	99	90.182	ENSOGAG00000010229	CSTF3	99	90.182	Otolemur_garnettii
ENSTNIG00000013811	cstf3	89	90.513	ENSOARG00000017271	CSTF3	99	90.513	Ovis_aries
ENSTNIG00000013811	cstf3	99	86.993	ENSPPAG00000027358	CSTF3	99	86.993	Pan_paniscus
ENSTNIG00000013811	cstf3	99	90.845	ENSPPRG00000016852	CSTF3	99	90.845	Panthera_pardus
ENSTNIG00000013811	cstf3	99	90.845	ENSPTIG00000008716	CSTF3	99	90.845	Panthera_tigris_altaica
ENSTNIG00000013811	cstf3	99	90.704	ENSPTRG00000003485	CSTF3	99	90.704	Pan_troglodytes
ENSTNIG00000013811	cstf3	99	90.704	ENSPANG00000013722	CSTF3	97	93.541	Papio_anubis
ENSTNIG00000013811	cstf3	99	93.512	ENSPKIG00000023648	cstf3	99	93.512	Paramormyrops_kingsleyae
ENSTNIG00000013811	cstf3	98	90.960	ENSPSIG00000009173	CSTF3	99	90.960	Pelodiscus_sinensis
ENSTNIG00000013811	cstf3	75	98.327	ENSPMGG00000000164	cstf3	98	98.327	Periophthalmus_magnuspinnatus
ENSTNIG00000013811	cstf3	99	90.423	ENSPEMG00000011481	Cstf3	99	90.423	Peromyscus_maniculatus_bairdii
ENSTNIG00000013811	cstf3	98	78.873	ENSPMAG00000007282	cstf3	99	79.044	Petromyzon_marinus
ENSTNIG00000013811	cstf3	99	76.231	ENSPCIG00000030419	-	89	76.512	Phascolarctos_cinereus
ENSTNIG00000013811	cstf3	99	89.014	ENSPCIG00000026406	-	100	90.720	Phascolarctos_cinereus
ENSTNIG00000013811	cstf3	99	96.469	ENSPFOG00000017239	cstf3	99	96.469	Poecilia_formosa
ENSTNIG00000013811	cstf3	99	96.328	ENSPLAG00000009456	cstf3	99	96.328	Poecilia_latipinna
ENSTNIG00000013811	cstf3	99	96.469	ENSPMEG00000010320	cstf3	99	96.469	Poecilia_mexicana
ENSTNIG00000013811	cstf3	99	96.328	ENSPREG00000013549	cstf3	99	96.328	Poecilia_reticulata
ENSTNIG00000013811	cstf3	99	90.704	ENSPPYG00000003375	CSTF3	99	90.704	Pongo_abelii
ENSTNIG00000013811	cstf3	70	94.425	ENSPCAG00000008025	-	70	94.425	Procavia_capensis
ENSTNIG00000013811	cstf3	99	85.634	ENSPCOG00000014417	CSTF3	99	85.634	Propithecus_coquereli
ENSTNIG00000013811	cstf3	99	85.634	ENSPVAG00000002350	CSTF3	99	85.634	Pteropus_vampyrus
ENSTNIG00000013811	cstf3	99	96.469	ENSPNYG00000018259	cstf3	99	96.469	Pundamilia_nyererei
ENSTNIG00000013811	cstf3	99	94.093	ENSPNAG00000020182	cstf3	99	94.093	Pygocentrus_nattereri
ENSTNIG00000013811	cstf3	87	89.920	ENSRNOG00000012089	Cstf3	100	89.920	Rattus_norvegicus
ENSTNIG00000013811	cstf3	99	88.811	ENSRBIG00000044258	CSTF3	100	90.400	Rhinopithecus_bieti
ENSTNIG00000013811	cstf3	99	90.704	ENSRROG00000043450	CSTF3	100	90.400	Rhinopithecus_roxellana
ENSTNIG00000013811	cstf3	99	90.704	ENSSBOG00000024764	CSTF3	99	94.518	Saimiri_boliviensis_boliviensis
ENSTNIG00000013811	cstf3	99	81.180	ENSSHAG00000003135	-	98	81.180	Sarcophilus_harrisii
ENSTNIG00000013811	cstf3	98	91.243	ENSSHAG00000018128	-	99	91.243	Sarcophilus_harrisii
ENSTNIG00000013811	cstf3	98	93.494	ENSSFOG00015022133	cstf3	99	93.494	Scleropages_formosus
ENSTNIG00000013811	cstf3	99	96.186	ENSSMAG00000002197	cstf3	99	96.186	Scophthalmus_maximus
ENSTNIG00000013811	cstf3	99	97.458	ENSSDUG00000020426	cstf3	99	97.458	Seriola_dumerili
ENSTNIG00000013811	cstf3	99	97.599	ENSSLDG00000025649	cstf3	99	97.599	Seriola_lalandi_dorsalis
ENSTNIG00000013811	cstf3	99	90.563	ENSSARG00000000391	CSTF3	99	90.563	Sorex_araneus
ENSTNIG00000013811	cstf3	96	90.593	ENSSPUG00000010546	CSTF3	100	90.593	Sphenodon_punctatus
ENSTNIG00000013811	cstf3	99	97.175	ENSSPAG00000004958	cstf3	99	97.175	Stegastes_partitus
ENSTNIG00000013811	cstf3	99	90.563	ENSSSCG00000040954	CSTF3	99	90.563	Sus_scrofa
ENSTNIG00000013811	cstf3	98	90.395	ENSTGUG00000005010	CSTF3	100	90.395	Taeniopygia_guttata
ENSTNIG00000013811	cstf3	99	98.446	ENSTRUG00000004959	cstf3	99	98.446	Takifugu_rubripes
ENSTNIG00000013811	cstf3	89	87.850	ENSTBEG00000001544	CSTF3	90	87.850	Tupaia_belangeri
ENSTNIG00000013811	cstf3	99	87.887	ENSTTRG00000016366	CSTF3	99	87.887	Tursiops_truncatus
ENSTNIG00000013811	cstf3	98	90.678	ENSUMAG00000018971	CSTF3	100	90.080	Ursus_maritimus
ENSTNIG00000013811	cstf3	99	90.563	ENSVPAG00000007800	CSTF3	99	90.563	Vicugna_pacos
ENSTNIG00000013811	cstf3	98	90.960	ENSVVUG00000014938	CSTF3	100	90.400	Vulpes_vulpes
ENSTNIG00000013811	cstf3	66	42.116	ENSXETG00000017946	-	99	42.116	Xenopus_tropicalis
ENSTNIG00000013811	cstf3	88	75.000	ENSXETG00000021399	cstf3	100	76.052	Xenopus_tropicalis
ENSTNIG00000013811	cstf3	87	95.987	ENSXCOG00000011741	cstf3	100	95.987	Xiphophorus_couchianus
ENSTNIG00000013811	cstf3	99	96.469	ENSXMAG00000009545	cstf3	99	96.469	Xiphophorus_maculatus