EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSTNIG00000013819 (Gene tree)
Gene ID: -
Gene Symbol: rbms3
Alias: zgc:153698
Full Name: RNA binding motif%2C single stranded interacting protein
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 45756 bases
Position: chr8:4035038-4080793
Accession: ZDB-GENE-060929-244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016822	RRM_1	PF00076.22	3.4e-30	1	2
ENSTNIP00000016822	RRM_1	PF00076.22	3.4e-30	2	2
ENSTNIP00000002683	RRM_1	PF00076.22	4.1e-30	1	2
ENSTNIP00000002683	RRM_1	PF00076.22	4.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017036	-	1194	-	ENSTNIP00000016822	398 (aa)	-	H3D8I1
ENSTNIT00000001037	-	1263	-	ENSTNIP00000002683	421 (aa)	-	H3C364

Gene Model

Click here to download ENSTNIG00000013819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000013819	rbms3	94	69.048	ENSTNIG00000015056	rbms2b	88	69.333
ENSTNIG00000013819	rbms3	97	65.394	ENSTNIG00000016496	RBMS1	96	65.775
ENSTNIG00000013819	rbms3	82	59.091	ENSTNIG00000009477	rbms1a	99	55.623
ENSTNIG00000013819	rbms3	95	76.441	ENSTNIG00000013818	-	94	76.982
ENSTNIG00000013819	rbms3	93	68.800	ENSTNIG00000014563	rbms2a	97	65.602