EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000013861 (Gene tree)
Gene ID: -
Gene Symbol: rnaseh2b
Alias: zgc:56602
Full Name: ribonuclease H2%2C subunit B
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3234 bases
Position: chr2:10980419-10983652
Accession: ZDB-GENE-040426-1090
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016865	RNase_H2-Ydr279	PF09468.10	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017079	-	1060	-	ENSTNIP00000016865	308 (aa)	-	H3D8M4

Gene Model

Click here to download ENSTNIG00000013861's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013861's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000013861	rnaseh2b	88	51.971	ENSG00000136104	RNASEH2B	99	51.293	Homo_sapiens
ENSTNIG00000013861	rnaseh2b	100	80.844	ENSAPOG00000010496	rnaseh2b	100	80.844	Acanthochromis_polyacanthus
ENSTNIG00000013861	rnaseh2b	87	51.636	ENSAMEG00000012040	RNASEH2B	92	51.636	Ailuropoda_melanoleuca
ENSTNIG00000013861	rnaseh2b	100	70.779	ENSACIG00000021991	rnaseh2b	97	75.000	Amphilophus_citrinellus
ENSTNIG00000013861	rnaseh2b	100	81.169	ENSAOCG00000013398	rnaseh2b	100	81.169	Amphiprion_ocellaris
ENSTNIG00000013861	rnaseh2b	100	80.844	ENSAPEG00000006033	rnaseh2b	100	80.844	Amphiprion_percula
ENSTNIG00000013861	rnaseh2b	100	79.870	ENSATEG00000008370	rnaseh2b	100	79.870	Anabas_testudineus
ENSTNIG00000013861	rnaseh2b	82	63.529	ENSAPLG00000008955	RNASEH2B	99	63.333	Anas_platyrhynchos
ENSTNIG00000013861	rnaseh2b	93	56.552	ENSACAG00000011679	RNASEH2B	97	56.552	Anolis_carolinensis
ENSTNIG00000013861	rnaseh2b	87	53.333	ENSANAG00000020662	RNASEH2B	86	53.333	Aotus_nancymaae
ENSTNIG00000013861	rnaseh2b	100	76.299	ENSACLG00000000467	rnaseh2b	100	76.299	Astatotilapia_calliptera
ENSTNIG00000013861	rnaseh2b	99	70.455	ENSAMXG00000014351	rnaseh2b	99	70.455	Astyanax_mexicanus
ENSTNIG00000013861	rnaseh2b	87	52.788	ENSBTAG00000020149	RNASEH2B	87	52.788	Bos_taurus
ENSTNIG00000013861	rnaseh2b	82	44.094	ENSCJAG00000003822	-	94	44.094	Callithrix_jacchus
ENSTNIG00000013861	rnaseh2b	87	52.416	ENSCJAG00000008585	-	88	52.416	Callithrix_jacchus
ENSTNIG00000013861	rnaseh2b	87	51.111	ENSCAFG00000004295	RNASEH2B	88	51.111	Canis_familiaris
ENSTNIG00000013861	rnaseh2b	87	51.111	ENSCAFG00020000250	RNASEH2B	88	51.481	Canis_lupus_dingo
ENSTNIG00000013861	rnaseh2b	87	52.239	ENSCHIG00000018220	RNASEH2B	87	52.239	Capra_hircus
ENSTNIG00000013861	rnaseh2b	76	48.718	ENSCHIG00000012982	-	82	48.718	Capra_hircus
ENSTNIG00000013861	rnaseh2b	87	45.522	ENSTSYG00000031177	-	86	45.522	Carlito_syrichta
ENSTNIG00000013861	rnaseh2b	87	52.593	ENSTSYG00000009176	-	87	52.593	Carlito_syrichta
ENSTNIG00000013861	rnaseh2b	87	45.926	ENSCAPG00000009978	RNASEH2B	91	46.296	Cavia_aperea
ENSTNIG00000013861	rnaseh2b	87	50.923	ENSCPOG00000032527	RNASEH2B	86	50.923	Cavia_porcellus
ENSTNIG00000013861	rnaseh2b	87	53.333	ENSCCAG00000026979	RNASEH2B	88	53.160	Cebus_capucinus
ENSTNIG00000013861	rnaseh2b	85	52.852	ENSCATG00000031336	RNASEH2B	74	52.852	Cercocebus_atys
ENSTNIG00000013861	rnaseh2b	87	53.704	ENSCLAG00000003517	RNASEH2B	74	53.704	Chinchilla_lanigera
ENSTNIG00000013861	rnaseh2b	86	51.866	ENSCSAG00000017701	RNASEH2B	81	51.866	Chlorocebus_sabaeus
ENSTNIG00000013861	rnaseh2b	88	43.066	ENSCHOG00000013688	RNASEH2B	89	44.526	Choloepus_hoffmanni
ENSTNIG00000013861	rnaseh2b	99	56.958	ENSCPBG00000008684	RNASEH2B	95	56.958	Chrysemys_picta_bellii
ENSTNIG00000013861	rnaseh2b	93	36.184	ENSCING00000016454	-	98	36.184	Ciona_intestinalis
ENSTNIG00000013861	rnaseh2b	87	52.015	ENSCANG00000041511	-	87	52.015	Colobus_angolensis_palliatus
ENSTNIG00000013861	rnaseh2b	87	52.963	ENSCGRG00001000611	Rnaseh2b	87	53.333	Cricetulus_griseus_chok1gshd
ENSTNIG00000013861	rnaseh2b	87	52.963	ENSCGRG00000006077	Rnaseh2b	87	53.333	Cricetulus_griseus_crigri
ENSTNIG00000013861	rnaseh2b	100	78.247	ENSCSEG00000004910	rnaseh2b	100	78.247	Cynoglossus_semilaevis
ENSTNIG00000013861	rnaseh2b	100	74.351	ENSCVAG00000005212	rnaseh2b	100	74.351	Cyprinodon_variegatus
ENSTNIG00000013861	rnaseh2b	99	69.481	ENSDARG00000005128	rnaseh2b	99	69.481	Danio_rerio
ENSTNIG00000013861	rnaseh2b	87	47.407	ENSDNOG00000034290	-	86	47.407	Dasypus_novemcinctus
ENSTNIG00000013861	rnaseh2b	87	49.630	ENSDNOG00000049666	-	87	49.630	Dasypus_novemcinctus
ENSTNIG00000013861	rnaseh2b	87	53.333	ENSDORG00000010708	Rnaseh2b	86	53.333	Dipodomys_ordii
ENSTNIG00000013861	rnaseh2b	84	40.927	ENSEBUG00000005965	rnaseh2b	98	40.927	Eptatretus_burgeri
ENSTNIG00000013861	rnaseh2b	87	52.941	ENSEASG00005017323	RNASEH2B	86	52.941	Equus_asinus_asinus
ENSTNIG00000013861	rnaseh2b	87	53.676	ENSECAG00000014262	RNASEH2B	86	53.676	Equus_caballus
ENSTNIG00000013861	rnaseh2b	100	72.816	ENSELUG00000019560	rnaseh2b	100	72.816	Esox_lucius
ENSTNIG00000013861	rnaseh2b	85	50.190	ENSFCAG00000014257	RNASEH2B	82	50.190	Felis_catus
ENSTNIG00000013861	rnaseh2b	93	58.478	ENSFALG00000008435	RNASEH2B	98	58.478	Ficedula_albicollis
ENSTNIG00000013861	rnaseh2b	87	50.741	ENSFDAG00000009920	RNASEH2B	93	50.741	Fukomys_damarensis
ENSTNIG00000013861	rnaseh2b	100	77.922	ENSFHEG00000012160	rnaseh2b	100	77.922	Fundulus_heteroclitus
ENSTNIG00000013861	rnaseh2b	100	66.667	ENSGMOG00000016830	rnaseh2b	100	66.667	Gadus_morhua
ENSTNIG00000013861	rnaseh2b	95	57.143	ENSGALG00000017015	RNASEH2B	100	57.282	Gallus_gallus
ENSTNIG00000013861	rnaseh2b	100	76.948	ENSGAFG00000021222	rnaseh2b	100	76.948	Gambusia_affinis
ENSTNIG00000013861	rnaseh2b	100	77.244	ENSGACG00000002821	rnaseh2b	100	77.244	Gasterosteus_aculeatus
ENSTNIG00000013861	rnaseh2b	91	59.643	ENSGAGG00000014722	RNASEH2B	99	59.643	Gopherus_agassizii
ENSTNIG00000013861	rnaseh2b	87	52.381	ENSGGOG00000001044	RNASEH2B	87	52.381	Gorilla_gorilla
ENSTNIG00000013861	rnaseh2b	100	76.948	ENSHBUG00000006049	rnaseh2b	100	76.948	Haplochromis_burtoni
ENSTNIG00000013861	rnaseh2b	87	52.593	ENSHGLG00100015953	RNASEH2B	91	52.593	Heterocephalus_glaber_male
ENSTNIG00000013861	rnaseh2b	100	71.613	ENSHCOG00000003318	rnaseh2b	100	71.613	Hippocampus_comes
ENSTNIG00000013861	rnaseh2b	100	71.845	ENSIPUG00000023815	rnaseh2b	100	71.845	Ictalurus_punctatus
ENSTNIG00000013861	rnaseh2b	87	53.731	ENSSTOG00000015126	RNASEH2B	91	53.731	Ictidomys_tridecemlineatus
ENSTNIG00000013861	rnaseh2b	88	52.206	ENSJJAG00000013335	Rnaseh2b	91	52.206	Jaculus_jaculus
ENSTNIG00000013861	rnaseh2b	100	75.649	ENSKMAG00000002198	rnaseh2b	100	75.649	Kryptolebias_marmoratus
ENSTNIG00000013861	rnaseh2b	100	78.247	ENSLBEG00000019331	rnaseh2b	100	78.247	Labrus_bergylta
ENSTNIG00000013861	rnaseh2b	69	63.084	ENSLACG00000010782	RNASEH2B	92	63.043	Latimeria_chalumnae
ENSTNIG00000013861	rnaseh2b	100	64.725	ENSLOCG00000009296	rnaseh2b	100	64.725	Lepisosteus_oculatus
ENSTNIG00000013861	rnaseh2b	87	51.111	ENSLAFG00000030158	RNASEH2B	87	51.111	Loxodonta_africana
ENSTNIG00000013861	rnaseh2b	87	52.593	ENSMFAG00000038464	-	86	52.593	Macaca_fascicularis
ENSTNIG00000013861	rnaseh2b	87	48.519	ENSMMUG00000021746	RNASEH2B	85	48.519	Macaca_mulatta
ENSTNIG00000013861	rnaseh2b	87	52.593	ENSMNEG00000030580	RNASEH2B	86	52.593	Macaca_nemestrina
ENSTNIG00000013861	rnaseh2b	87	52.015	ENSMLEG00000043911	-	87	52.015	Mandrillus_leucophaeus
ENSTNIG00000013861	rnaseh2b	100	80.844	ENSMAMG00000017109	rnaseh2b	100	80.844	Mastacembelus_armatus
ENSTNIG00000013861	rnaseh2b	100	71.975	ENSMZEG00005021926	rnaseh2b	100	72.293	Maylandia_zebra
ENSTNIG00000013861	rnaseh2b	88	58.759	ENSMGAG00000015025	RNASEH2B	100	58.824	Meleagris_gallopavo
ENSTNIG00000013861	rnaseh2b	87	52.222	ENSMAUG00000016520	Rnaseh2b	87	52.593	Mesocricetus_auratus
ENSTNIG00000013861	rnaseh2b	87	52.206	ENSMICG00000000528	RNASEH2B	87	52.206	Microcebus_murinus
ENSTNIG00000013861	rnaseh2b	99	78.502	ENSMMOG00000019799	rnaseh2b	100	81.597	Mola_mola
ENSTNIG00000013861	rnaseh2b	98	54.276	ENSMODG00000010775	RNASEH2B	99	54.276	Monodelphis_domestica
ENSTNIG00000013861	rnaseh2b	99	78.827	ENSMALG00000004463	rnaseh2b	100	78.827	Monopterus_albus
ENSTNIG00000013861	rnaseh2b	75	54.008	MGP_CAROLIEiJ_G0019389	Rnaseh2b	85	55.274	Mus_caroli
ENSTNIG00000013861	rnaseh2b	87	53.333	ENSMUSG00000021932	Rnaseh2b	87	53.333	Mus_musculus
ENSTNIG00000013861	rnaseh2b	86	39.048	MGP_PahariEiJ_G0030407	-	88	40.190	Mus_pahari
ENSTNIG00000013861	rnaseh2b	68	48.325	ENSMPUG00000018010	RNASEH2B	87	48.325	Mustela_putorius_furo
ENSTNIG00000013861	rnaseh2b	87	54.412	ENSMLUG00000004065	-	86	54.412	Myotis_lucifugus
ENSTNIG00000013861	rnaseh2b	100	75.974	ENSNBRG00000003253	rnaseh2b	100	75.974	Neolamprologus_brichardi
ENSTNIG00000013861	rnaseh2b	87	52.747	ENSNLEG00000003804	RNASEH2B	87	52.747	Nomascus_leucogenys
ENSTNIG00000013861	rnaseh2b	92	54.545	ENSMEUG00000003665	RNASEH2B	97	54.545	Notamacropus_eugenii
ENSTNIG00000013861	rnaseh2b	52	50.000	ENSOPRG00000003695	-	51	52.469	Ochotona_princeps
ENSTNIG00000013861	rnaseh2b	69	50.943	ENSODEG00000005412	-	86	50.943	Octodon_degus
ENSTNIG00000013861	rnaseh2b	89	53.650	ENSODEG00000006793	-	88	53.650	Octodon_degus
ENSTNIG00000013861	rnaseh2b	100	76.948	ENSONIG00000006657	rnaseh2b	100	76.948	Oreochromis_niloticus
ENSTNIG00000013861	rnaseh2b	91	56.446	ENSOANG00000015537	RNASEH2B	98	56.446	Ornithorhynchus_anatinus
ENSTNIG00000013861	rnaseh2b	88	50.183	ENSOCUG00000008904	RNASEH2B	85	51.282	Oryctolagus_cuniculus
ENSTNIG00000013861	rnaseh2b	99	73.355	ENSORLG00000011850	rnaseh2b	100	73.355	Oryzias_latipes
ENSTNIG00000013861	rnaseh2b	99	74.013	ENSORLG00020012081	rnaseh2b	100	74.013	Oryzias_latipes_hni
ENSTNIG00000013861	rnaseh2b	99	73.355	ENSORLG00015015468	rnaseh2b	100	73.355	Oryzias_latipes_hsok
ENSTNIG00000013861	rnaseh2b	99	74.013	ENSOMEG00000012441	rnaseh2b	100	74.013	Oryzias_melastigma
ENSTNIG00000013861	rnaseh2b	87	53.114	ENSOGAG00000016486	RNASEH2B	91	53.114	Otolemur_garnettii
ENSTNIG00000013861	rnaseh2b	87	52.239	ENSOARG00000008701	RNASEH2B	90	52.239	Ovis_aries
ENSTNIG00000013861	rnaseh2b	87	52.747	ENSPPAG00000026374	RNASEH2B	93	50.000	Pan_paniscus
ENSTNIG00000013861	rnaseh2b	87	49.635	ENSPPRG00000012450	RNASEH2B	89	49.635	Panthera_pardus
ENSTNIG00000013861	rnaseh2b	87	50.000	ENSPTIG00000013918	RNASEH2B	97	50.000	Panthera_tigris_altaica
ENSTNIG00000013861	rnaseh2b	87	52.381	ENSPTRG00000005886	RNASEH2B	95	54.183	Pan_troglodytes
ENSTNIG00000013861	rnaseh2b	87	52.015	ENSPANG00000022424	-	87	52.015	Papio_anubis
ENSTNIG00000013861	rnaseh2b	100	67.961	ENSPKIG00000013386	rnaseh2b	100	67.961	Paramormyrops_kingsleyae
ENSTNIG00000013861	rnaseh2b	58	57.459	ENSPSIG00000002224	RNASEH2B	84	57.459	Pelodiscus_sinensis
ENSTNIG00000013861	rnaseh2b	63	75.385	ENSPMGG00000010299	rnaseh2b	95	75.385	Periophthalmus_magnuspinnatus
ENSTNIG00000013861	rnaseh2b	87	52.963	ENSPEMG00000019721	Rnaseh2b	87	53.676	Peromyscus_maniculatus_bairdii
ENSTNIG00000013861	rnaseh2b	93	52.431	ENSPCIG00000014535	-	96	52.431	Phascolarctos_cinereus
ENSTNIG00000013861	rnaseh2b	100	77.742	ENSPFOG00000016722	rnaseh2b	100	77.742	Poecilia_formosa
ENSTNIG00000013861	rnaseh2b	100	77.922	ENSPLAG00000011755	rnaseh2b	100	77.922	Poecilia_latipinna
ENSTNIG00000013861	rnaseh2b	100	77.922	ENSPMEG00000002721	rnaseh2b	100	77.922	Poecilia_mexicana
ENSTNIG00000013861	rnaseh2b	100	77.597	ENSPREG00000007737	rnaseh2b	100	77.597	Poecilia_reticulata
ENSTNIG00000013861	rnaseh2b	87	52.381	ENSPPYG00000005378	RNASEH2B	86	52.381	Pongo_abelii
ENSTNIG00000013861	rnaseh2b	87	53.114	ENSPCOG00000026623	RNASEH2B	87	53.114	Propithecus_coquereli
ENSTNIG00000013861	rnaseh2b	76	50.211	ENSPVAG00000000508	RNASEH2B	88	50.211	Pteropus_vampyrus
ENSTNIG00000013861	rnaseh2b	100	76.623	ENSPNYG00000013552	rnaseh2b	100	76.623	Pundamilia_nyererei
ENSTNIG00000013861	rnaseh2b	99	69.156	ENSPNAG00000024825	rnaseh2b	99	69.156	Pygocentrus_nattereri
ENSTNIG00000013861	rnaseh2b	87	52.941	ENSRNOG00000009192	Rnaseh2b	87	52.941	Rattus_norvegicus
ENSTNIG00000013861	rnaseh2b	87	52.222	ENSRBIG00000028928	-	86	52.222	Rhinopithecus_bieti
ENSTNIG00000013861	rnaseh2b	86	47.547	ENSRBIG00000036017	-	86	47.547	Rhinopithecus_bieti
ENSTNIG00000013861	rnaseh2b	69	43.662	ENSRROG00000044915	-	80	43.662	Rhinopithecus_roxellana
ENSTNIG00000013861	rnaseh2b	87	52.222	ENSRROG00000018808	-	87	51.648	Rhinopithecus_roxellana
ENSTNIG00000013861	rnaseh2b	87	53.704	ENSSBOG00000008081	RNASEH2B	96	53.704	Saimiri_boliviensis_boliviensis
ENSTNIG00000013861	rnaseh2b	100	54.341	ENSSHAG00000016190	RNASEH2B	100	54.693	Sarcophilus_harrisii
ENSTNIG00000013861	rnaseh2b	99	69.481	ENSSFOG00015010190	rnaseh2b	100	69.481	Scleropages_formosus
ENSTNIG00000013861	rnaseh2b	100	78.247	ENSSMAG00000001546	rnaseh2b	100	78.247	Scophthalmus_maximus
ENSTNIG00000013861	rnaseh2b	100	81.169	ENSSDUG00000007567	rnaseh2b	100	81.169	Seriola_dumerili
ENSTNIG00000013861	rnaseh2b	100	80.519	ENSSLDG00000012485	rnaseh2b	100	80.519	Seriola_lalandi_dorsalis
ENSTNIG00000013861	rnaseh2b	85	55.303	ENSSPUG00000006745	-	95	55.303	Sphenodon_punctatus
ENSTNIG00000013861	rnaseh2b	100	81.494	ENSSPAG00000020926	rnaseh2b	100	81.494	Stegastes_partitus
ENSTNIG00000013861	rnaseh2b	87	53.333	ENSSSCG00000024385	RNASEH2B	96	55.242	Sus_scrofa
ENSTNIG00000013861	rnaseh2b	87	62.963	ENSTGUG00000012104	RNASEH2B	99	62.963	Taeniopygia_guttata
ENSTNIG00000013861	rnaseh2b	100	83.766	ENSTRUG00000015098	rnaseh2b	100	83.766	Takifugu_rubripes
ENSTNIG00000013861	rnaseh2b	87	45.387	ENSTTRG00000010761	RNASEH2B	87	46.520	Tursiops_truncatus
ENSTNIG00000013861	rnaseh2b	87	52.222	ENSUAMG00000022849	RNASEH2B	96	52.222	Ursus_americanus
ENSTNIG00000013861	rnaseh2b	87	51.481	ENSUMAG00000018556	RNASEH2B	96	51.481	Ursus_maritimus
ENSTNIG00000013861	rnaseh2b	87	53.160	ENSVPAG00000005679	RNASEH2B	92	53.160	Vicugna_pacos
ENSTNIG00000013861	rnaseh2b	87	51.481	ENSVVUG00000024015	RNASEH2B	80	52.593	Vulpes_vulpes
ENSTNIG00000013861	rnaseh2b	99	54.369	ENSXETG00000020720	rnaseh2b	100	54.369	Xenopus_tropicalis
ENSTNIG00000013861	rnaseh2b	100	77.922	ENSXCOG00000018732	rnaseh2b	100	77.922	Xiphophorus_couchianus
ENSTNIG00000013861	rnaseh2b	100	78.571	ENSXMAG00000022554	rnaseh2b	100	78.571	Xiphophorus_maculatus