EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: ENSTNIG00000013977 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: fj89c04|wu:fj89c04
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4911 bases
Position: chr2:13109220-13114130
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000016984	zf-CCCH	PF00642.24	2.3e-12	1	2
ENSTNIP00000016984	zf-CCCH	PF00642.24	2.3e-12	2	2
ENSTNIP00000001951	zf-CCCH	PF00642.24	4.2e-12	1	1
ENSTNIP00000016984	zf-CCCH_2	PF14608.6	1.2e-06	1	4
ENSTNIP00000016984	zf-CCCH_2	PF14608.6	1.2e-06	2	4
ENSTNIP00000016984	zf-CCCH_2	PF14608.6	1.2e-06	3	4
ENSTNIP00000016984	zf-CCCH_2	PF14608.6	1.2e-06	4	4
ENSTNIP00000001951	zf-CCCH_2	PF14608.6	7.5e-06	1	4
ENSTNIP00000001951	zf-CCCH_2	PF14608.6	7.5e-06	2	4
ENSTNIP00000001951	zf-CCCH_2	PF14608.6	7.5e-06	3	4
ENSTNIP00000001951	zf-CCCH_2	PF14608.6	7.5e-06	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000003305	-	1191	-	ENSTNIP00000001951	396 (aa)	-	H3C135
ENSTNIT00000017199	-	1065	-	ENSTNIP00000016984	355 (aa)	-	H3D8Z3

Gene Model

Click here to download ENSTNIG00000013977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000013977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000013977	-	95	57.566	ENSTNIG00000007695	MBNL1	85	57.843
ENSTNIG00000013977	-	97	57.471	ENSTNIG00000016812	mbnl3	99	56.395
ENSTNIG00000013977	-	99	61.299	ENSTNIG00000014533	-	99	61.582
ENSTNIG00000013977	-	73	63.100	ENSTNIG00000003878	mbnl1	93	65.385