EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000014079 (Gene tree)
Gene ID: -
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2690 bases
Position: chr18:2380156-2382845
Accession: ZDB-GENE-080926-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017087	EXOSC1	PF10447.9	1.3e-15	1	1
ENSTNIP00000017087	ECR1_N	PF14382.6	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017303	-	599	-	ENSTNIP00000017087	198 (aa)	-	H3D996

Gene Model

Click here to download ENSTNIG00000014079's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014079's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014079	exosc1	97	73.958	ENSG00000171311	EXOSC1	97	73.958	Homo_sapiens
ENSTNIG00000014079	exosc1	97	82.902	ENSAPOG00000007822	exosc1	98	82.902	Acanthochromis_polyacanthus
ENSTNIG00000014079	exosc1	97	74.479	ENSAMEG00000000129	EXOSC1	97	74.479	Ailuropoda_melanoleuca
ENSTNIG00000014079	exosc1	95	84.574	ENSACIG00000018956	exosc1	91	84.574	Amphilophus_citrinellus
ENSTNIG00000014079	exosc1	97	82.383	ENSAOCG00000010699	exosc1	98	82.383	Amphiprion_ocellaris
ENSTNIG00000014079	exosc1	92	72.131	ENSAPEG00000012690	exosc1	97	72.131	Amphiprion_percula
ENSTNIG00000014079	exosc1	97	82.383	ENSATEG00000018683	exosc1	98	82.383	Anabas_testudineus
ENSTNIG00000014079	exosc1	96	71.053	ENSACAG00000002101	EXOSC1	96	71.053	Anolis_carolinensis
ENSTNIG00000014079	exosc1	97	73.958	ENSANAG00000034669	EXOSC1	97	73.958	Aotus_nancymaae
ENSTNIG00000014079	exosc1	97	83.938	ENSACLG00000021243	exosc1	98	83.938	Astatotilapia_calliptera
ENSTNIG00000014079	exosc1	97	80.829	ENSAMXG00000011116	exosc1	98	80.829	Astyanax_mexicanus
ENSTNIG00000014079	exosc1	97	74.479	ENSBTAG00000012699	EXOSC1	97	74.479	Bos_taurus
ENSTNIG00000014079	exosc1	97	32.836	WBGene00012966	exos-1	95	32.836	Caenorhabditis_elegans
ENSTNIG00000014079	exosc1	97	73.438	ENSCJAG00000016586	EXOSC1	97	73.438	Callithrix_jacchus
ENSTNIG00000014079	exosc1	97	73.958	ENSCAFG00000009068	EXOSC1	91	73.958	Canis_familiaris
ENSTNIG00000014079	exosc1	97	73.958	ENSCAFG00020006002	EXOSC1	91	73.958	Canis_lupus_dingo
ENSTNIG00000014079	exosc1	97	74.479	ENSCHIG00000015253	EXOSC1	97	74.479	Capra_hircus
ENSTNIG00000014079	exosc1	97	73.438	ENSTSYG00000000760	EXOSC1	97	73.438	Carlito_syrichta
ENSTNIG00000014079	exosc1	97	73.575	ENSCPOG00000001173	EXOSC1	97	73.575	Cavia_porcellus
ENSTNIG00000014079	exosc1	97	39.062	ENSCCAG00000023986	EXOSC1	97	38.974	Cebus_capucinus
ENSTNIG00000014079	exosc1	97	73.958	ENSCATG00000034114	EXOSC1	97	73.958	Cercocebus_atys
ENSTNIG00000014079	exosc1	97	73.958	ENSCLAG00000002463	EXOSC1	97	73.958	Chinchilla_lanigera
ENSTNIG00000014079	exosc1	97	73.438	ENSCSAG00000005870	EXOSC1	97	73.438	Chlorocebus_sabaeus
ENSTNIG00000014079	exosc1	93	62.162	ENSCHOG00000006477	EXOSC1	97	62.162	Choloepus_hoffmanni
ENSTNIG00000014079	exosc1	54	66.038	ENSCPBG00000011949	EXOSC1	88	66.038	Chrysemys_picta_bellii
ENSTNIG00000014079	exosc1	96	52.880	ENSCING00000022734	-	90	52.880	Ciona_intestinalis
ENSTNIG00000014079	exosc1	96	55.497	ENSCSAVG00000010865	-	96	55.497	Ciona_savignyi
ENSTNIG00000014079	exosc1	97	73.958	ENSCANG00000034159	EXOSC1	97	73.958	Colobus_angolensis_palliatus
ENSTNIG00000014079	exosc1	97	72.917	ENSCGRG00001000335	Exosc1	97	72.917	Cricetulus_griseus_chok1gshd
ENSTNIG00000014079	exosc1	97	72.917	ENSCGRG00000011602	Exosc1	97	72.917	Cricetulus_griseus_crigri
ENSTNIG00000014079	exosc1	100	69.347	ENSCSEG00000007895	exosc1	98	69.347	Cynoglossus_semilaevis
ENSTNIG00000014079	exosc1	97	77.720	ENSCVAG00000016748	exosc1	98	77.720	Cyprinodon_variegatus
ENSTNIG00000014079	exosc1	97	80.311	ENSDARG00000059841	exosc1	98	80.311	Danio_rerio
ENSTNIG00000014079	exosc1	72	73.427	ENSDNOG00000007983	EXOSC1	97	73.427	Dasypus_novemcinctus
ENSTNIG00000014079	exosc1	97	73.438	ENSDORG00000016528	Exosc1	97	73.438	Dipodomys_ordii
ENSTNIG00000014079	exosc1	93	49.198	FBgn0032346	Csl4	91	49.198	Drosophila_melanogaster
ENSTNIG00000014079	exosc1	97	71.354	ENSETEG00000002469	-	97	71.354	Echinops_telfairi
ENSTNIG00000014079	exosc1	97	60.513	ENSEBUG00000008164	exosc1	96	60.513	Eptatretus_burgeri
ENSTNIG00000014079	exosc1	97	65.625	ENSEASG00005008684	EXOSC1	97	65.625	Equus_asinus_asinus
ENSTNIG00000014079	exosc1	58	55.263	ENSECAG00000010621	EXOSC1	68	55.263	Equus_caballus
ENSTNIG00000014079	exosc1	97	73.438	ENSEEUG00000005647	EXOSC1	97	73.438	Erinaceus_europaeus
ENSTNIG00000014079	exosc1	97	78.974	ENSELUG00000017369	exosc1	85	78.974	Esox_lucius
ENSTNIG00000014079	exosc1	97	74.479	ENSFCAG00000040563	EXOSC1	91	74.479	Felis_catus
ENSTNIG00000014079	exosc1	97	70.466	ENSFALG00000008450	EXOSC1	97	70.466	Ficedula_albicollis
ENSTNIG00000014079	exosc1	97	73.438	ENSFDAG00000000846	EXOSC1	97	73.438	Fukomys_damarensis
ENSTNIG00000014079	exosc1	97	78.756	ENSFHEG00000009154	exosc1	98	78.756	Fundulus_heteroclitus
ENSTNIG00000014079	exosc1	97	80.311	ENSGMOG00000008993	exosc1	98	80.311	Gadus_morhua
ENSTNIG00000014079	exosc1	97	59.067	ENSGALG00000039917	EXOSC1	99	73.649	Gallus_gallus
ENSTNIG00000014079	exosc1	99	77.778	ENSGAFG00000010265	exosc1	96	77.778	Gambusia_affinis
ENSTNIG00000014079	exosc1	97	79.275	ENSGACG00000018936	exosc1	98	79.275	Gasterosteus_aculeatus
ENSTNIG00000014079	exosc1	97	68.750	ENSGAGG00000019192	EXOSC1	97	68.750	Gopherus_agassizii
ENSTNIG00000014079	exosc1	97	63.542	ENSGGOG00000003099	EXOSC1	96	63.542	Gorilla_gorilla
ENSTNIG00000014079	exosc1	97	83.938	ENSHBUG00000017857	exosc1	98	83.938	Haplochromis_burtoni
ENSTNIG00000014079	exosc1	97	72.917	ENSHGLG00000016927	EXOSC1	97	72.917	Heterocephalus_glaber_female
ENSTNIG00000014079	exosc1	97	72.917	ENSHGLG00100012208	EXOSC1	97	72.917	Heterocephalus_glaber_male
ENSTNIG00000014079	exosc1	97	80.829	ENSHCOG00000019882	exosc1	98	80.829	Hippocampus_comes
ENSTNIG00000014079	exosc1	97	78.756	ENSIPUG00000007685	exosc1	98	78.756	Ictalurus_punctatus
ENSTNIG00000014079	exosc1	97	73.057	ENSSTOG00000006615	EXOSC1	97	73.057	Ictidomys_tridecemlineatus
ENSTNIG00000014079	exosc1	59	62.393	ENSSTOG00000029860	-	89	62.393	Ictidomys_tridecemlineatus
ENSTNIG00000014079	exosc1	97	73.958	ENSJJAG00000013311	Exosc1	97	73.958	Jaculus_jaculus
ENSTNIG00000014079	exosc1	99	79.293	ENSKMAG00000001202	exosc1	82	79.293	Kryptolebias_marmoratus
ENSTNIG00000014079	exosc1	97	82.383	ENSLBEG00000011448	exosc1	98	82.383	Labrus_bergylta
ENSTNIG00000014079	exosc1	99	57.500	ENSLOCG00000003776	exosc1	100	57.500	Lepisosteus_oculatus
ENSTNIG00000014079	exosc1	97	72.917	ENSLAFG00000015983	EXOSC1	97	72.917	Loxodonta_africana
ENSTNIG00000014079	exosc1	97	73.958	ENSMFAG00000001493	EXOSC1	97	73.958	Macaca_fascicularis
ENSTNIG00000014079	exosc1	97	73.958	ENSMMUG00000020028	EXOSC1	97	67.347	Macaca_mulatta
ENSTNIG00000014079	exosc1	97	73.958	ENSMNEG00000029816	EXOSC1	97	73.958	Macaca_nemestrina
ENSTNIG00000014079	exosc1	97	68.229	ENSMLEG00000027643	EXOSC1	97	68.229	Mandrillus_leucophaeus
ENSTNIG00000014079	exosc1	97	82.902	ENSMAMG00000012200	exosc1	98	82.902	Mastacembelus_armatus
ENSTNIG00000014079	exosc1	97	83.938	ENSMZEG00005007042	exosc1	98	83.938	Maylandia_zebra
ENSTNIG00000014079	exosc1	97	63.542	ENSMAUG00000020462	-	96	63.542	Mesocricetus_auratus
ENSTNIG00000014079	exosc1	97	73.575	ENSMICG00000007664	EXOSC1	90	73.575	Microcebus_murinus
ENSTNIG00000014079	exosc1	97	72.917	ENSMOCG00000006004	-	97	72.917	Microtus_ochrogaster
ENSTNIG00000014079	exosc1	96	67.708	ENSMOCG00000017124	-	96	67.708	Microtus_ochrogaster
ENSTNIG00000014079	exosc1	94	63.441	ENSMMOG00000021403	exosc1	95	63.441	Mola_mola
ENSTNIG00000014079	exosc1	97	72.539	ENSMODG00000004213	EXOSC1	97	72.539	Monodelphis_domestica
ENSTNIG00000014079	exosc1	95	82.447	ENSMALG00000007061	exosc1	93	82.447	Monopterus_albus
ENSTNIG00000014079	exosc1	97	72.396	MGP_CAROLIEiJ_G0022959	Exosc1	97	72.396	Mus_caroli
ENSTNIG00000014079	exosc1	97	72.396	ENSMUSG00000034321	Exosc1	97	72.396	Mus_musculus
ENSTNIG00000014079	exosc1	97	72.917	MGP_PahariEiJ_G0014449	Exosc1	97	72.917	Mus_pahari
ENSTNIG00000014079	exosc1	97	72.396	MGP_SPRETEiJ_G0023880	Exosc1	97	72.396	Mus_spretus
ENSTNIG00000014079	exosc1	97	74.479	ENSMPUG00000017044	EXOSC1	97	74.479	Mustela_putorius_furo
ENSTNIG00000014079	exosc1	97	73.958	ENSMLUG00000009228	EXOSC1	97	73.958	Myotis_lucifugus
ENSTNIG00000014079	exosc1	97	71.354	ENSNGAG00000022033	Exosc1	97	71.354	Nannospalax_galili
ENSTNIG00000014079	exosc1	99	64.141	ENSNBRG00000024007	exosc1	100	64.141	Neolamprologus_brichardi
ENSTNIG00000014079	exosc1	97	73.438	ENSNLEG00000013872	EXOSC1	97	73.438	Nomascus_leucogenys
ENSTNIG00000014079	exosc1	56	68.182	ENSMEUG00000002246	EXOSC1	96	68.182	Notamacropus_eugenii
ENSTNIG00000014079	exosc1	97	72.917	ENSOPRG00000005065	EXOSC1	97	72.917	Ochotona_princeps
ENSTNIG00000014079	exosc1	97	73.438	ENSODEG00000016709	EXOSC1	97	73.438	Octodon_degus
ENSTNIG00000014079	exosc1	99	82.323	ENSONIG00000017683	exosc1	100	82.323	Oreochromis_niloticus
ENSTNIG00000014079	exosc1	59	78.632	ENSOANG00000006563	EXOSC1	98	76.190	Ornithorhynchus_anatinus
ENSTNIG00000014079	exosc1	97	67.876	ENSOCUG00000026461	-	97	67.876	Oryctolagus_cuniculus
ENSTNIG00000014079	exosc1	97	72.539	ENSOCUG00000011898	-	97	72.539	Oryctolagus_cuniculus
ENSTNIG00000014079	exosc1	97	78.238	ENSORLG00000011595	exosc1	98	78.238	Oryzias_latipes
ENSTNIG00000014079	exosc1	98	78.351	ENSORLG00020005831	exosc1	98	78.351	Oryzias_latipes_hni
ENSTNIG00000014079	exosc1	97	77.720	ENSORLG00015004317	exosc1	98	77.720	Oryzias_latipes_hsok
ENSTNIG00000014079	exosc1	99	64.646	ENSOMEG00000013907	exosc1	100	64.646	Oryzias_melastigma
ENSTNIG00000014079	exosc1	97	73.438	ENSOGAG00000016259	EXOSC1	97	73.438	Otolemur_garnettii
ENSTNIG00000014079	exosc1	97	73.958	ENSOARG00000010136	EXOSC1	97	73.958	Ovis_aries
ENSTNIG00000014079	exosc1	97	68.041	ENSPPAG00000039842	EXOSC1	97	68.041	Pan_paniscus
ENSTNIG00000014079	exosc1	97	74.479	ENSPPRG00000023366	EXOSC1	97	74.479	Panthera_pardus
ENSTNIG00000014079	exosc1	97	74.479	ENSPTIG00000017701	EXOSC1	97	74.479	Panthera_tigris_altaica
ENSTNIG00000014079	exosc1	97	73.958	ENSPTRG00000002808	EXOSC1	97	73.958	Pan_troglodytes
ENSTNIG00000014079	exosc1	97	73.958	ENSPANG00000021324	EXOSC1	97	73.958	Papio_anubis
ENSTNIG00000014079	exosc1	97	80.311	ENSPKIG00000016037	exosc1	98	80.311	Paramormyrops_kingsleyae
ENSTNIG00000014079	exosc1	75	69.799	ENSPSIG00000013571	EXOSC1	98	67.742	Pelodiscus_sinensis
ENSTNIG00000014079	exosc1	97	70.466	ENSPMGG00000014002	exosc1	98	70.466	Periophthalmus_magnuspinnatus
ENSTNIG00000014079	exosc1	97	72.917	ENSPEMG00000010710	-	97	72.917	Peromyscus_maniculatus_bairdii
ENSTNIG00000014079	exosc1	95	64.211	ENSPMAG00000000195	exosc1	95	64.211	Petromyzon_marinus
ENSTNIG00000014079	exosc1	97	71.503	ENSPCIG00000002210	EXOSC1	96	71.503	Phascolarctos_cinereus
ENSTNIG00000014079	exosc1	99	77.778	ENSPFOG00000006755	exosc1	96	77.778	Poecilia_formosa
ENSTNIG00000014079	exosc1	97	78.238	ENSPLAG00000005880	exosc1	98	78.238	Poecilia_latipinna
ENSTNIG00000014079	exosc1	99	77.778	ENSPMEG00000015598	exosc1	96	77.778	Poecilia_mexicana
ENSTNIG00000014079	exosc1	99	67.172	ENSPREG00000000405	exosc1	95	67.172	Poecilia_reticulata
ENSTNIG00000014079	exosc1	97	73.575	ENSPPYG00000002531	EXOSC1	97	73.575	Pongo_abelii
ENSTNIG00000014079	exosc1	97	72.917	ENSPCAG00000009135	EXOSC1	97	72.917	Procavia_capensis
ENSTNIG00000014079	exosc1	97	67.708	ENSPCOG00000027539	EXOSC1	97	67.708	Propithecus_coquereli
ENSTNIG00000014079	exosc1	97	73.958	ENSPVAG00000003372	EXOSC1	97	73.958	Pteropus_vampyrus
ENSTNIG00000014079	exosc1	97	83.938	ENSPNYG00000021745	exosc1	98	83.938	Pundamilia_nyererei
ENSTNIG00000014079	exosc1	97	79.793	ENSPNAG00000001944	exosc1	98	79.793	Pygocentrus_nattereri
ENSTNIG00000014079	exosc1	97	72.917	ENSRNOG00000048708	Exosc1	97	72.917	Rattus_norvegicus
ENSTNIG00000014079	exosc1	97	73.958	ENSRBIG00000035618	EXOSC1	97	73.958	Rhinopithecus_bieti
ENSTNIG00000014079	exosc1	97	73.958	ENSRROG00000032589	EXOSC1	90	73.958	Rhinopithecus_roxellana
ENSTNIG00000014079	exosc1	70	34.409	YNL232W	CSL4	63	34.409	Saccharomyces_cerevisiae
ENSTNIG00000014079	exosc1	97	73.958	ENSSBOG00000000359	EXOSC1	97	73.958	Saimiri_boliviensis_boliviensis
ENSTNIG00000014079	exosc1	75	79.195	ENSSHAG00000018219	EXOSC1	100	79.195	Sarcophilus_harrisii
ENSTNIG00000014079	exosc1	97	78.238	ENSSFOG00015016289	-	98	78.238	Scleropages_formosus
ENSTNIG00000014079	exosc1	97	80.311	ENSSFOG00015009069	exosc1	98	80.311	Scleropages_formosus
ENSTNIG00000014079	exosc1	97	81.865	ENSSMAG00000003721	exosc1	98	81.865	Scophthalmus_maximus
ENSTNIG00000014079	exosc1	97	81.347	ENSSDUG00000002993	exosc1	98	81.347	Seriola_dumerili
ENSTNIG00000014079	exosc1	97	81.347	ENSSLDG00000025181	exosc1	98	81.347	Seriola_lalandi_dorsalis
ENSTNIG00000014079	exosc1	97	62.500	ENSSARG00000000162	EXOSC1	97	62.500	Sorex_araneus
ENSTNIG00000014079	exosc1	97	68.229	ENSSPUG00000012263	EXOSC1	97	68.229	Sphenodon_punctatus
ENSTNIG00000014079	exosc1	99	73.232	ENSSPAG00000016792	exosc1	84	73.232	Stegastes_partitus
ENSTNIG00000014079	exosc1	97	73.958	ENSSSCG00000010518	EXOSC1	88	73.958	Sus_scrofa
ENSTNIG00000014079	exosc1	96	70.526	ENSTGUG00000009692	EXOSC1	96	70.526	Taeniopygia_guttata
ENSTNIG00000014079	exosc1	99	93.878	ENSTRUG00000007706	exosc1	100	93.878	Takifugu_rubripes
ENSTNIG00000014079	exosc1	97	68.750	ENSTBEG00000006011	EXOSC1	97	68.750	Tupaia_belangeri
ENSTNIG00000014079	exosc1	94	75.269	ENSTTRG00000009887	EXOSC1	99	75.269	Tursiops_truncatus
ENSTNIG00000014079	exosc1	97	58.333	ENSUAMG00000010266	EXOSC1	97	58.333	Ursus_americanus
ENSTNIG00000014079	exosc1	97	58.333	ENSUMAG00000022002	EXOSC1	97	58.333	Ursus_maritimus
ENSTNIG00000014079	exosc1	97	73.958	ENSVVUG00000023192	EXOSC1	61	73.958	Vulpes_vulpes
ENSTNIG00000014079	exosc1	97	69.271	ENSXETG00000003434	exosc1	97	69.271	Xenopus_tropicalis
ENSTNIG00000014079	exosc1	63	80.645	ENSXCOG00000014499	exosc1	93	80.645	Xiphophorus_couchianus
ENSTNIG00000014079	exosc1	97	67.876	ENSXMAG00000023382	exosc1	92	67.876	Xiphophorus_maculatus