EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000014436 (Gene tree)
Gene ID: -
Gene Symbol: lsm12b
Alias: lsm12|wu:fe01f11|zgc:66039
Full Name: LSM12 homolog b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4465 bases
Position: chr2:973500-977964
Accession: ZDB-GENE-040426-2164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017454	AD	PF09793.9	2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017674	-	1390	-	ENSTNIP00000017454	196 (aa)	-	Q4RYG3

Gene Model

Click here to download ENSTNIG00000014436's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014436's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014436	lsm12b	100	84.694	ENSG00000161654	LSM12	100	84.694	Homo_sapiens
ENSTNIG00000014436	lsm12b	100	97.959	ENSAPOG00000007907	lsm12b	100	97.959	Acanthochromis_polyacanthus
ENSTNIG00000014436	lsm12b	100	82.915	ENSAMEG00000018321	LSM12	100	82.915	Ailuropoda_melanoleuca
ENSTNIG00000014436	lsm12b	100	96.429	ENSACIG00000008538	lsm12b	100	96.429	Amphilophus_citrinellus
ENSTNIG00000014436	lsm12b	100	97.449	ENSAOCG00000021847	lsm12b	88	97.449	Amphiprion_ocellaris
ENSTNIG00000014436	lsm12b	100	97.449	ENSAPEG00000002252	lsm12b	100	97.449	Amphiprion_percula
ENSTNIG00000014436	lsm12b	100	96.429	ENSATEG00000005705	lsm12b	100	96.429	Anabas_testudineus
ENSTNIG00000014436	lsm12b	100	83.673	ENSACAG00000004618	LSM12	100	83.673	Anolis_carolinensis
ENSTNIG00000014436	lsm12b	100	84.694	ENSANAG00000029011	LSM12	100	84.694	Aotus_nancymaae
ENSTNIG00000014436	lsm12b	100	96.939	ENSACLG00000026332	lsm12b	100	96.939	Astatotilapia_calliptera
ENSTNIG00000014436	lsm12b	100	85.714	ENSAMXG00000036117	lsm12a	91	85.714	Astyanax_mexicanus
ENSTNIG00000014436	lsm12b	100	92.857	ENSAMXG00000032952	lsm12b	100	92.857	Astyanax_mexicanus
ENSTNIG00000014436	lsm12b	100	84.694	ENSBTAG00000016252	LSM12	100	84.694	Bos_taurus
ENSTNIG00000014436	lsm12b	100	84.694	ENSCJAG00000048480	LSM12	100	84.694	Callithrix_jacchus
ENSTNIG00000014436	lsm12b	100	84.694	ENSCAFG00000014379	LSM12	92	84.694	Canis_familiaris
ENSTNIG00000014436	lsm12b	100	84.694	ENSCAFG00020012173	LSM12	100	84.694	Canis_lupus_dingo
ENSTNIG00000014436	lsm12b	100	84.694	ENSCHIG00000018175	LSM12	100	84.694	Capra_hircus
ENSTNIG00000014436	lsm12b	100	84.694	ENSTSYG00000036361	LSM12	100	84.694	Carlito_syrichta
ENSTNIG00000014436	lsm12b	83	80.247	ENSCAPG00000009647	LSM12	89	80.247	Cavia_aperea
ENSTNIG00000014436	lsm12b	100	83.673	ENSCPOG00000012860	LSM12	100	83.673	Cavia_porcellus
ENSTNIG00000014436	lsm12b	100	84.694	ENSCCAG00000032905	LSM12	100	84.694	Cebus_capucinus
ENSTNIG00000014436	lsm12b	100	84.694	ENSCATG00000030577	-	100	84.694	Cercocebus_atys
ENSTNIG00000014436	lsm12b	100	84.184	ENSCLAG00000015759	LSM12	100	84.184	Chinchilla_lanigera
ENSTNIG00000014436	lsm12b	100	85.204	ENSCSAG00000003486	LSM12	100	85.204	Chlorocebus_sabaeus
ENSTNIG00000014436	lsm12b	56	84.404	ENSCHOG00000001198	LSM12	100	84.404	Choloepus_hoffmanni
ENSTNIG00000014436	lsm12b	100	85.204	ENSCPBG00000027105	LSM12	100	85.204	Chrysemys_picta_bellii
ENSTNIG00000014436	lsm12b	100	84.694	ENSCANG00000043328	LSM12	100	84.694	Colobus_angolensis_palliatus
ENSTNIG00000014436	lsm12b	100	84.694	ENSCGRG00001002094	Lsm12	100	84.694	Cricetulus_griseus_chok1gshd
ENSTNIG00000014436	lsm12b	89	76.437	ENSCGRG00000004316	Lsm12	98	76.437	Cricetulus_griseus_crigri
ENSTNIG00000014436	lsm12b	100	95.918	ENSCSEG00000008434	lsm12b	100	95.918	Cynoglossus_semilaevis
ENSTNIG00000014436	lsm12b	100	96.429	ENSCVAG00000008755	lsm12b	100	96.429	Cyprinodon_variegatus
ENSTNIG00000014436	lsm12b	100	87.245	ENSDARG00000028848	lsm12a	100	87.245	Danio_rerio
ENSTNIG00000014436	lsm12b	100	93.878	ENSDARG00000109510	lsm12b	100	93.878	Danio_rerio
ENSTNIG00000014436	lsm12b	100	84.694	ENSDNOG00000002418	LSM12	91	84.694	Dasypus_novemcinctus
ENSTNIG00000014436	lsm12b	100	84.694	ENSDORG00000016381	Lsm12	100	84.694	Dipodomys_ordii
ENSTNIG00000014436	lsm12b	83	33.728	FBgn0030364	Lsm12	76	33.728	Drosophila_melanogaster
ENSTNIG00000014436	lsm12b	73	31.646	FBgn0036057	CG14164	83	31.646	Drosophila_melanogaster
ENSTNIG00000014436	lsm12b	88	75.145	ENSETEG00000011012	-	99	75.145	Echinops_telfairi
ENSTNIG00000014436	lsm12b	100	84.184	ENSETEG00000008374	LSM12	100	84.184	Echinops_telfairi
ENSTNIG00000014436	lsm12b	85	67.066	ENSEBUG00000016299	lsm12a	92	67.066	Eptatretus_burgeri
ENSTNIG00000014436	lsm12b	100	84.694	ENSEASG00005010155	LSM12	100	84.694	Equus_asinus_asinus
ENSTNIG00000014436	lsm12b	100	84.694	ENSECAG00000009071	LSM12	100	84.694	Equus_caballus
ENSTNIG00000014436	lsm12b	78	84.314	ENSEEUG00000002419	-	100	84.314	Erinaceus_europaeus
ENSTNIG00000014436	lsm12b	100	94.898	ENSELUG00000015538	lsm12b	100	90.306	Esox_lucius
ENSTNIG00000014436	lsm12b	100	91.327	ENSELUG00000000256	-	100	91.327	Esox_lucius
ENSTNIG00000014436	lsm12b	100	84.694	ENSFCAG00000037021	LSM12	100	84.694	Felis_catus
ENSTNIG00000014436	lsm12b	80	80.769	ENSFDAG00000008954	LSM12	91	80.769	Fukomys_damarensis
ENSTNIG00000014436	lsm12b	100	95.408	ENSFHEG00000019913	lsm12b	100	95.408	Fundulus_heteroclitus
ENSTNIG00000014436	lsm12b	81	95.570	ENSGMOG00000015449	lsm12b	100	95.570	Gadus_morhua
ENSTNIG00000014436	lsm12b	78	84.967	ENSGALG00000039803	LSM12	100	84.967	Gallus_gallus
ENSTNIG00000014436	lsm12b	100	95.918	ENSGAFG00000011829	lsm12b	100	95.918	Gambusia_affinis
ENSTNIG00000014436	lsm12b	81	96.203	ENSGACG00000003428	lsm12b	100	96.203	Gasterosteus_aculeatus
ENSTNIG00000014436	lsm12b	100	84.184	ENSGAGG00000021965	LSM12	100	84.184	Gopherus_agassizii
ENSTNIG00000014436	lsm12b	100	84.694	ENSGGOG00000010589	-	100	84.694	Gorilla_gorilla
ENSTNIG00000014436	lsm12b	85	96.407	ENSHBUG00000007667	lsm12b	74	96.407	Haplochromis_burtoni
ENSTNIG00000014436	lsm12b	100	84.694	ENSHGLG00000011411	LSM12	100	84.694	Heterocephalus_glaber_female
ENSTNIG00000014436	lsm12b	79	83.766	ENSHGLG00100000241	LSM12	82	83.766	Heterocephalus_glaber_male
ENSTNIG00000014436	lsm12b	100	95.408	ENSHCOG00000002094	lsm12b	100	95.408	Hippocampus_comes
ENSTNIG00000014436	lsm12b	99	83.505	ENSIPUG00000008936	lsm12a	99	83.505	Ictalurus_punctatus
ENSTNIG00000014436	lsm12b	100	92.347	ENSIPUG00000014800	lsm12	100	92.347	Ictalurus_punctatus
ENSTNIG00000014436	lsm12b	100	84.694	ENSSTOG00000007403	LSM12	100	84.694	Ictidomys_tridecemlineatus
ENSTNIG00000014436	lsm12b	96	75.263	ENSJJAG00000011793	-	100	75.263	Jaculus_jaculus
ENSTNIG00000014436	lsm12b	100	83.673	ENSJJAG00000004364	-	100	83.673	Jaculus_jaculus
ENSTNIG00000014436	lsm12b	80	72.327	ENSJJAG00000014652	-	95	72.327	Jaculus_jaculus
ENSTNIG00000014436	lsm12b	85	95.808	ENSKMAG00000007704	lsm12b	56	95.808	Kryptolebias_marmoratus
ENSTNIG00000014436	lsm12b	100	96.939	ENSLBEG00000027999	lsm12b	100	96.939	Labrus_bergylta
ENSTNIG00000014436	lsm12b	100	86.735	ENSLACG00000015981	LSM12	100	86.735	Latimeria_chalumnae
ENSTNIG00000014436	lsm12b	100	90.306	ENSLOCG00000013079	lsm12b	99	90.306	Lepisosteus_oculatus
ENSTNIG00000014436	lsm12b	100	84.694	ENSLAFG00000005202	LSM12	100	84.694	Loxodonta_africana
ENSTNIG00000014436	lsm12b	100	84.694	ENSMFAG00000031376	LSM12	100	84.694	Macaca_fascicularis
ENSTNIG00000014436	lsm12b	65	72.414	ENSMMUG00000042106	-	100	72.414	Macaca_mulatta
ENSTNIG00000014436	lsm12b	100	84.694	ENSMMUG00000006804	LSM12	100	84.694	Macaca_mulatta
ENSTNIG00000014436	lsm12b	100	84.694	ENSMNEG00000030594	-	100	84.694	Macaca_nemestrina
ENSTNIG00000014436	lsm12b	100	84.694	ENSMLEG00000039934	LSM12	100	84.694	Mandrillus_leucophaeus
ENSTNIG00000014436	lsm12b	100	96.939	ENSMAMG00000004279	lsm12b	100	96.939	Mastacembelus_armatus
ENSTNIG00000014436	lsm12b	100	96.939	ENSMZEG00005005754	lsm12b	100	96.939	Maylandia_zebra
ENSTNIG00000014436	lsm12b	100	85.204	ENSMICG00000037219	LSM12	100	85.455	Microcebus_murinus
ENSTNIG00000014436	lsm12b	100	72.449	ENSMOCG00000017015	-	86	72.449	Microtus_ochrogaster
ENSTNIG00000014436	lsm12b	100	84.694	ENSMOCG00000019878	-	100	84.694	Microtus_ochrogaster
ENSTNIG00000014436	lsm12b	100	96.939	ENSMMOG00000020848	lsm12b	100	96.939	Mola_mola
ENSTNIG00000014436	lsm12b	100	96.939	ENSMALG00000007578	lsm12b	100	96.939	Monopterus_albus
ENSTNIG00000014436	lsm12b	100	84.184	MGP_CAROLIEiJ_G0017241	Lsm12	100	84.184	Mus_caroli
ENSTNIG00000014436	lsm12b	100	84.694	ENSMUSG00000020922	Lsm12	100	84.694	Mus_musculus
ENSTNIG00000014436	lsm12b	100	77.934	MGP_PahariEiJ_G0018371	Lsm12	100	84.545	Mus_pahari
ENSTNIG00000014436	lsm12b	100	84.184	MGP_SPRETEiJ_G0018084	Lsm12	99	85.185	Mus_spretus
ENSTNIG00000014436	lsm12b	100	85.204	ENSMLUG00000006391	LSM12	100	85.204	Myotis_lucifugus
ENSTNIG00000014436	lsm12b	100	84.694	ENSNGAG00000001870	Lsm12	100	84.694	Nannospalax_galili
ENSTNIG00000014436	lsm12b	100	58.128	ENSNGAG00000015429	-	100	58.128	Nannospalax_galili
ENSTNIG00000014436	lsm12b	100	96.939	ENSNBRG00000006266	lsm12b	100	96.939	Neolamprologus_brichardi
ENSTNIG00000014436	lsm12b	100	84.694	ENSNLEG00000005580	-	100	84.694	Nomascus_leucogenys
ENSTNIG00000014436	lsm12b	85	84.337	ENSMEUG00000007501	-	100	84.337	Notamacropus_eugenii
ENSTNIG00000014436	lsm12b	100	84.694	ENSOPRG00000008552	LSM12	100	84.694	Ochotona_princeps
ENSTNIG00000014436	lsm12b	100	77.041	ENSODEG00000007886	-	74	77.041	Octodon_degus
ENSTNIG00000014436	lsm12b	99	84.536	ENSODEG00000017998	-	99	85.455	Octodon_degus
ENSTNIG00000014436	lsm12b	100	96.939	ENSONIG00000007933	lsm12b	100	96.939	Oreochromis_niloticus
ENSTNIG00000014436	lsm12b	100	82.915	ENSOCUG00000008566	-	100	82.915	Oryctolagus_cuniculus
ENSTNIG00000014436	lsm12b	99	79.487	ENSOCUG00000021254	-	100	79.487	Oryctolagus_cuniculus
ENSTNIG00000014436	lsm12b	99	78.974	ENSOCUG00000027889	-	100	78.974	Oryctolagus_cuniculus
ENSTNIG00000014436	lsm12b	99	78.462	ENSOCUG00000024823	-	100	78.462	Oryctolagus_cuniculus
ENSTNIG00000014436	lsm12b	100	97.449	ENSORLG00000011310	lsm12b	100	97.449	Oryzias_latipes
ENSTNIG00000014436	lsm12b	100	97.449	ENSORLG00020002060	lsm12b	92	97.449	Oryzias_latipes_hni
ENSTNIG00000014436	lsm12b	100	97.449	ENSORLG00015001647	lsm12b	92	97.449	Oryzias_latipes_hsok
ENSTNIG00000014436	lsm12b	100	96.429	ENSOMEG00000006184	lsm12b	92	96.429	Oryzias_melastigma
ENSTNIG00000014436	lsm12b	100	85.204	ENSOGAG00000010489	LSM12	100	85.204	Otolemur_garnettii
ENSTNIG00000014436	lsm12b	100	81.683	ENSOARG00000006589	LSM12	100	81.683	Ovis_aries
ENSTNIG00000014436	lsm12b	100	75.000	ENSPPAG00000034974	-	100	75.000	Pan_paniscus
ENSTNIG00000014436	lsm12b	100	84.694	ENSPPRG00000023420	LSM12	100	84.694	Panthera_pardus
ENSTNIG00000014436	lsm12b	78	84.314	ENSPTIG00000012704	-	82	84.314	Panthera_tigris_altaica
ENSTNIG00000014436	lsm12b	72	82.727	ENSPTIG00000014850	-	100	82.727	Panthera_tigris_altaica
ENSTNIG00000014436	lsm12b	100	84.694	ENSPTRG00000009261	LSM12	100	84.694	Pan_troglodytes
ENSTNIG00000014436	lsm12b	100	84.694	ENSPANG00000021315	-	100	84.694	Papio_anubis
ENSTNIG00000014436	lsm12b	100	85.204	ENSPKIG00000017932	-	100	85.204	Paramormyrops_kingsleyae
ENSTNIG00000014436	lsm12b	100	93.367	ENSPKIG00000021058	lsm12b	100	93.367	Paramormyrops_kingsleyae
ENSTNIG00000014436	lsm12b	100	95.918	ENSPMGG00000021344	lsm12b	100	95.918	Periophthalmus_magnuspinnatus
ENSTNIG00000014436	lsm12b	100	84.694	ENSPEMG00000012199	Lsm12	100	84.694	Peromyscus_maniculatus_bairdii
ENSTNIG00000014436	lsm12b	89	67.429	ENSPMAG00000005461	lsm12a	99	67.429	Petromyzon_marinus
ENSTNIG00000014436	lsm12b	100	84.694	ENSPCIG00000020244	LSM12	100	84.694	Phascolarctos_cinereus
ENSTNIG00000014436	lsm12b	100	94.898	ENSPFOG00000015930	lsm12b	100	94.898	Poecilia_formosa
ENSTNIG00000014436	lsm12b	100	94.898	ENSPLAG00000021089	lsm12b	100	94.898	Poecilia_latipinna
ENSTNIG00000014436	lsm12b	100	94.898	ENSPMEG00000012961	lsm12b	100	94.898	Poecilia_mexicana
ENSTNIG00000014436	lsm12b	87	95.906	ENSPREG00000010236	lsm12b	95	95.906	Poecilia_reticulata
ENSTNIG00000014436	lsm12b	100	84.694	ENSPPYG00000008344	LSM12	100	84.694	Pongo_abelii
ENSTNIG00000014436	lsm12b	81	84.906	ENSPCAG00000008790	LSM12	100	84.906	Procavia_capensis
ENSTNIG00000014436	lsm12b	100	84.694	ENSPCOG00000027951	LSM12	100	84.694	Propithecus_coquereli
ENSTNIG00000014436	lsm12b	100	84.184	ENSPVAG00000013706	LSM12	100	84.184	Pteropus_vampyrus
ENSTNIG00000014436	lsm12b	100	96.939	ENSPNYG00000003386	lsm12b	100	96.939	Pundamilia_nyererei
ENSTNIG00000014436	lsm12b	100	92.347	ENSPNAG00000004186	lsm12b	100	92.347	Pygocentrus_nattereri
ENSTNIG00000014436	lsm12b	100	83.673	ENSPNAG00000018435	lsm12a	100	83.673	Pygocentrus_nattereri
ENSTNIG00000014436	lsm12b	100	84.694	ENSRNOG00000020894	Lsm12	100	84.694	Rattus_norvegicus
ENSTNIG00000014436	lsm12b	100	84.694	ENSRBIG00000027910	LSM12	100	84.694	Rhinopithecus_bieti
ENSTNIG00000014436	lsm12b	97	52.880	ENSRROG00000000537	-	97	52.880	Rhinopithecus_roxellana
ENSTNIG00000014436	lsm12b	100	84.694	ENSRROG00000045530	-	100	84.694	Rhinopithecus_roxellana
ENSTNIG00000014436	lsm12b	100	84.694	ENSSBOG00000025310	LSM12	100	84.694	Saimiri_boliviensis_boliviensis
ENSTNIG00000014436	lsm12b	81	82.911	ENSSHAG00000014914	LSM12	100	82.911	Sarcophilus_harrisii
ENSTNIG00000014436	lsm12b	100	93.878	ENSSFOG00015020392	lsm12a	100	93.878	Scleropages_formosus
ENSTNIG00000014436	lsm12b	100	93.878	ENSSFOG00015009612	lsm12	100	93.878	Scleropages_formosus
ENSTNIG00000014436	lsm12b	100	96.939	ENSSMAG00000008089	lsm12b	100	96.939	Scophthalmus_maximus
ENSTNIG00000014436	lsm12b	100	96.939	ENSSDUG00000012711	lsm12b	100	96.939	Seriola_dumerili
ENSTNIG00000014436	lsm12b	100	96.939	ENSSLDG00000007404	lsm12b	100	96.939	Seriola_lalandi_dorsalis
ENSTNIG00000014436	lsm12b	78	83.660	ENSSARG00000005537	LSM12	100	83.660	Sorex_araneus
ENSTNIG00000014436	lsm12b	100	85.204	ENSSPUG00000011984	LSM12	100	85.204	Sphenodon_punctatus
ENSTNIG00000014436	lsm12b	100	97.449	ENSSPAG00000017058	lsm12b	100	97.449	Stegastes_partitus
ENSTNIG00000014436	lsm12b	100	84.694	ENSSSCG00000032394	LSM12	100	84.694	Sus_scrofa
ENSTNIG00000014436	lsm12b	100	96.939	ENSTRUG00000007121	lsm12b	100	96.939	Takifugu_rubripes
ENSTNIG00000014436	lsm12b	100	82.143	ENSTBEG00000012392	-	100	82.143	Tupaia_belangeri
ENSTNIG00000014436	lsm12b	100	84.184	ENSTBEG00000012523	-	100	84.184	Tupaia_belangeri
ENSTNIG00000014436	lsm12b	100	84.694	ENSTTRG00000010433	LSM12	100	84.694	Tursiops_truncatus
ENSTNIG00000014436	lsm12b	100	84.694	ENSUAMG00000006313	LSM12	100	84.694	Ursus_americanus
ENSTNIG00000014436	lsm12b	81	81.646	ENSUMAG00000012987	LSM12	90	81.646	Ursus_maritimus
ENSTNIG00000014436	lsm12b	100	80.102	ENSVPAG00000011145	LSM12	100	80.102	Vicugna_pacos
ENSTNIG00000014436	lsm12b	100	84.694	ENSVVUG00000017581	LSM12	100	84.694	Vulpes_vulpes
ENSTNIG00000014436	lsm12b	82	60.000	ENSXETG00000003371	lsm12	77	60.000	Xenopus_tropicalis
ENSTNIG00000014436	lsm12b	100	95.918	ENSXCOG00000003994	lsm12b	100	95.918	Xiphophorus_couchianus
ENSTNIG00000014436	lsm12b	100	95.918	ENSXMAG00000020950	lsm12b	100	95.918	Xiphophorus_maculatus