EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000014519 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3470 bases
Position: chr3:6447804-6451273
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017542	RNase_Zc3h12a	PF11977.8	1.2e-64	1	1
ENSTNIP00000000422	RNase_Zc3h12a	PF11977.8	1.2e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001749	-	792	-	ENSTNIP00000000422	263 (aa)	-	H3BWQ9
ENSTNIT00000017762	-	1842	-	ENSTNIP00000017542	614 (aa)	-	H3DAK1

Gene Model

Click here to download ENSTNIG00000014519's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014519's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000014519	-	93	45.605	ENSTNIG00000015684	-	98	46.382
ENSTNIG00000014519	-	99	47.485	ENSTNIG00000011828	zc3h12b	85	46.981

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014519	-	93	59.127	ENSG00000163874	ZC3H12A	83	61.475	Homo_sapiens
ENSTNIG00000014519	-	100	82.292	ENSAPOG00000015355	-	56	79.608	Acanthochromis_polyacanthus
ENSTNIG00000014519	-	91	77.869	ENSAPOG00000001632	-	54	90.455	Acanthochromis_polyacanthus
ENSTNIG00000014519	-	87	57.642	ENSACIG00000004135	si:dkey-206d17.12	80	57.642	Amphilophus_citrinellus
ENSTNIG00000014519	-	95	54.086	ENSACIG00000006790	-	92	45.963	Amphilophus_citrinellus
ENSTNIG00000014519	-	100	87.121	ENSACIG00000001362	-	71	76.613	Amphilophus_citrinellus
ENSTNIG00000014519	-	94	75.600	ENSAOCG00000001288	-	91	76.000	Amphiprion_ocellaris
ENSTNIG00000014519	-	87	59.825	ENSAOCG00000014326	-	85	59.565	Amphiprion_ocellaris
ENSTNIG00000014519	-	97	87.805	ENSAOCG00000003866	-	93	88.400	Amphiprion_ocellaris
ENSTNIG00000014519	-	94	78.020	ENSAPEG00000018582	-	98	78.188	Amphiprion_percula
ENSTNIG00000014519	-	94	75.600	ENSAPEG00000022263	-	91	76.000	Amphiprion_percula
ENSTNIG00000014519	-	94	56.855	ENSAPEG00000021795	si:dkey-206d17.12	91	57.028	Amphiprion_percula
ENSTNIG00000014519	-	100	80.556	ENSAPEG00000005727	-	93	83.333	Amphiprion_percula
ENSTNIG00000014519	-	95	74.016	ENSATEG00000002260	-	90	74.609	Anabas_testudineus
ENSTNIG00000014519	-	97	90.244	ENSATEG00000004134	-	62	76.923	Anabas_testudineus
ENSTNIG00000014519	-	87	61.905	ENSATEG00000006140	si:dkey-206d17.12	85	51.007	Anabas_testudineus
ENSTNIG00000014519	-	96	53.937	ENSATEG00000013053	-	88	53.937	Anabas_testudineus
ENSTNIG00000014519	-	86	59.912	ENSACAG00000017285	ZC3H12A	50	75.909	Anolis_carolinensis
ENSTNIG00000014519	-	92	61.728	ENSANAG00000009908	ZC3H12A	84	61.570	Aotus_nancymaae
ENSTNIG00000014519	-	97	90.244	ENSACLG00000027924	-	62	76.333	Astatotilapia_calliptera
ENSTNIG00000014519	-	93	60.408	ENSAMXG00000029641	si:dkey-206d17.12	80	61.224	Astyanax_mexicanus
ENSTNIG00000014519	-	92	61.728	ENSCATG00000037700	ZC3H12A	84	61.570	Cercocebus_atys
ENSTNIG00000014519	-	92	61.728	ENSCANG00000042287	ZC3H12A	84	61.570	Colobus_angolensis_palliatus
ENSTNIG00000014519	-	97	87.500	ENSCSEG00000010073	-	81	89.496	Cynoglossus_semilaevis
ENSTNIG00000014519	-	92	76.829	ENSCSEG00000008542	-	73	47.246	Cynoglossus_semilaevis
ENSTNIG00000014519	-	88	56.652	ENSCVAG00000001077	-	83	56.652	Cyprinodon_variegatus
ENSTNIG00000014519	-	100	80.420	ENSCVAG00000002328	-	74	68.338	Cyprinodon_variegatus
ENSTNIG00000014519	-	96	75.099	ENSCVAG00000016808	-	96	75.099	Cyprinodon_variegatus
ENSTNIG00000014519	-	87	61.135	ENSDARG00000005271	zc3h12a	57	74.882	Danio_rerio
ENSTNIG00000014519	-	87	45.852	ENSETEG00000018311	ZC3H12A	50	54.918	Echinops_telfairi
ENSTNIG00000014519	-	94	72.510	ENSELUG00000005470	-	75	51.674	Esox_lucius
ENSTNIG00000014519	-	90	75.630	ENSELUG00000009319	-	85	57.530	Esox_lucius
ENSTNIG00000014519	-	100	86.466	ENSFHEG00000021225	-	84	85.065	Fundulus_heteroclitus
ENSTNIG00000014519	-	95	50.744	ENSGMOG00000017975	-	98	51.333	Gadus_morhua
ENSTNIG00000014519	-	86	58.150	ENSGMOG00000017603	si:dkey-206d17.12	51	67.949	Gadus_morhua
ENSTNIG00000014519	-	100	83.453	ENSGAFG00000005290	-	75	67.286	Gambusia_affinis
ENSTNIG00000014519	-	95	51.747	ENSGACG00000001339	-	98	50.497	Gasterosteus_aculeatus
ENSTNIG00000014519	-	87	55.459	ENSGACG00000006636	-	66	69.903	Gasterosteus_aculeatus
ENSTNIG00000014519	-	95	74.788	ENSGACG00000014201	-	98	74.619	Gasterosteus_aculeatus
ENSTNIG00000014519	-	95	53.906	ENSHBUG00000021584	-	92	52.964	Haplochromis_burtoni
ENSTNIG00000014519	-	97	87.805	ENSHBUG00000006831	-	73	67.549	Haplochromis_burtoni
ENSTNIG00000014519	-	100	77.003	ENSHCOG00000008878	-	80	66.827	Hippocampus_comes
ENSTNIG00000014519	-	57	47.712	ENSHCOG00000007306	-	84	45.752	Hippocampus_comes
ENSTNIG00000014519	-	92	57.085	ENSHCOG00000004255	si:dkey-206d17.12	94	55.417	Hippocampus_comes
ENSTNIG00000014519	-	88	56.897	ENSKMAG00000002156	ZC3H12A	85	56.652	Kryptolebias_marmoratus
ENSTNIG00000014519	-	87	77.826	ENSKMAG00000013285	-	98	72.075	Kryptolebias_marmoratus
ENSTNIG00000014519	-	97	87.805	ENSKMAG00000011694	-	74	68.777	Kryptolebias_marmoratus
ENSTNIG00000014519	-	100	79.225	ENSLBEG00000012554	-	85	82.895	Labrus_bergylta
ENSTNIG00000014519	-	94	74.194	ENSLBEG00000012710	-	73	48.138	Labrus_bergylta
ENSTNIG00000014519	-	88	51.709	ENSLBEG00000012121	-	91	42.038	Labrus_bergylta
ENSTNIG00000014519	-	100	76.821	ENSLBEG00000003547	-	71	76.831	Labrus_bergylta
ENSTNIG00000014519	-	92	60.976	ENSLAFG00000018720	ZC3H12A	50	77.358	Loxodonta_africana
ENSTNIG00000014519	-	92	61.728	ENSMFAG00000032647	ZC3H12A	84	61.570	Macaca_fascicularis
ENSTNIG00000014519	-	88	63.203	ENSMNEG00000040453	ZC3H12A	86	60.081	Macaca_nemestrina
ENSTNIG00000014519	-	92	61.728	ENSMLEG00000034570	ZC3H12A	84	61.570	Mandrillus_leucophaeus
ENSTNIG00000014519	-	94	52.510	ENSMAMG00000004463	-	92	52.107	Mastacembelus_armatus
ENSTNIG00000014519	-	87	79.221	ENSMAMG00000020372	-	74	48.132	Mastacembelus_armatus
ENSTNIG00000014519	-	100	84.848	ENSMAMG00000021794	-	94	86.928	Mastacembelus_armatus
ENSTNIG00000014519	-	87	59.307	ENSMZEG00005023410	ZC3H12A	78	59.307	Maylandia_zebra
ENSTNIG00000014519	-	97	90.244	ENSMZEG00005007718	-	62	76.333	Maylandia_zebra
ENSTNIG00000014519	-	94	74.899	ENSMZEG00005019137	-	90	66.234	Maylandia_zebra
ENSTNIG00000014519	-	94	53.175	ENSMMOG00000014855	-	92	52.326	Mola_mola
ENSTNIG00000014519	-	95	57.647	ENSMMOG00000000727	zc3h12a	84	49.032	Mola_mola
ENSTNIG00000014519	-	89	74.468	ENSMMOG00000019526	-	71	49.263	Mola_mola
ENSTNIG00000014519	-	97	90.000	ENSMMOG00000005728	-	88	86.000	Mola_mola
ENSTNIG00000014519	-	100	77.397	ENSMALG00000010501	-	61	76.650	Monopterus_albus
ENSTNIG00000014519	-	95	59.144	MGP_SPRETEiJ_G0027441	Zc3h12a	88	59.144	Mus_spretus
ENSTNIG00000014519	-	94	74.899	ENSNBRG00000012175	-	90	66.883	Neolamprologus_brichardi
ENSTNIG00000014519	-	95	54.582	ENSNBRG00000010961	-	91	53.012	Neolamprologus_brichardi
ENSTNIG00000014519	-	97	90.244	ENSNBRG00000006978	-	62	75.833	Neolamprologus_brichardi
ENSTNIG00000014519	-	84	46.188	ENSMEUG00000003389	ZC3H12A	53	46.698	Notamacropus_eugenii
ENSTNIG00000014519	-	97	87.805	ENSONIG00000012268	-	87	78.981	Oreochromis_niloticus
ENSTNIG00000014519	-	95	59.375	ENSOCUG00000010856	ZC3H12A	56	77.419	Oryctolagus_cuniculus
ENSTNIG00000014519	-	87	60.426	ENSORLG00000009473	ZC3H12A	84	59.244	Oryzias_latipes
ENSTNIG00000014519	-	89	56.962	ENSORLG00000015280	-	50	59.176	Oryzias_latipes
ENSTNIG00000014519	-	89	89.316	ENSORLG00000029243	-	84	67.583	Oryzias_latipes
ENSTNIG00000014519	-	100	79.505	ENSORLG00020017005	-	74	67.583	Oryzias_latipes_hni
ENSTNIG00000014519	-	100	78.596	ENSORLG00015015211	-	74	67.294	Oryzias_latipes_hsok
ENSTNIG00000014519	-	100	80.420	ENSOMEG00000006666	-	74	67.630	Oryzias_melastigma
ENSTNIG00000014519	-	95	60.241	ENSOARG00000019760	ZC3H12A	57	60.241	Ovis_aries
ENSTNIG00000014519	-	95	57.812	ENSPPAG00000041054	ZC3H12A	86	60.081	Pan_paniscus
ENSTNIG00000014519	-	95	60.558	ENSPTIG00000012943	ZC3H12A	87	60.558	Panthera_tigris_altaica
ENSTNIG00000014519	-	95	57.812	ENSPTRG00000000544	ZC3H12A	86	60.081	Pan_troglodytes
ENSTNIG00000014519	-	92	61.728	ENSPANG00000011821	ZC3H12A	84	61.570	Papio_anubis
ENSTNIG00000014519	-	99	50.190	ENSPKIG00000019720	-	84	49.810	Paramormyrops_kingsleyae
ENSTNIG00000014519	-	94	75.000	ENSPMGG00000009790	-	76	92.891	Periophthalmus_magnuspinnatus
ENSTNIG00000014519	-	100	82.979	ENSPLAG00000009867	-	74	67.857	Poecilia_latipinna
ENSTNIG00000014519	-	87	55.983	ENSPMEG00000009279	-	88	55.556	Poecilia_mexicana
ENSTNIG00000014519	-	90	74.790	ENSPMEG00000011676	-	73	45.950	Poecilia_mexicana
ENSTNIG00000014519	-	100	82.979	ENSPMEG00000006624	-	74	68.000	Poecilia_mexicana
ENSTNIG00000014519	-	90	74.370	ENSPREG00000001607	-	77	75.519	Poecilia_reticulata
ENSTNIG00000014519	-	100	81.915	ENSPREG00000010838	-	74	67.622	Poecilia_reticulata
ENSTNIG00000014519	-	92	61.728	ENSRBIG00000042237	ZC3H12A	50	62.324	Rhinopithecus_bieti
ENSTNIG00000014519	-	94	60.081	ENSRROG00000037444	ZC3H12A	86	60.081	Rhinopithecus_roxellana
ENSTNIG00000014519	-	100	80.405	ENSSMAG00000007545	-	62	77.295	Scophthalmus_maximus
ENSTNIG00000014519	-	96	73.282	ENSSMAG00000007258	-	72	50.147	Scophthalmus_maximus
ENSTNIG00000014519	-	98	86.667	ENSSDUG00000021864	-	62	77.355	Seriola_dumerili
ENSTNIG00000014519	-	95	53.200	ENSSDUG00000010581	-	93	52.400	Seriola_dumerili
ENSTNIG00000014519	-	92	74.694	ENSSDUG00000013237	-	90	64.667	Seriola_dumerili
ENSTNIG00000014519	-	92	74.286	ENSSLDG00000004886	-	73	50.867	Seriola_lalandi_dorsalis
ENSTNIG00000014519	-	100	81.081	ENSSLDG00000012268	-	62	77.521	Seriola_lalandi_dorsalis
ENSTNIG00000014519	-	95	55.777	ENSSLDG00000009317	si:dkey-206d17.12	89	55.777	Seriola_lalandi_dorsalis
ENSTNIG00000014519	-	97	87.805	ENSSPAG00000009485	-	61	78.073	Stegastes_partitus
ENSTNIG00000014519	-	99	71.698	ENSSPAG00000001850	-	74	48.918	Stegastes_partitus
ENSTNIG00000014519	-	97	92.683	ENSTRUG00000022519	-	62	81.619	Takifugu_rubripes
ENSTNIG00000014519	-	89	59.336	ENSXCOG00000008984	zc3h12a	90	49.032	Xiphophorus_couchianus
ENSTNIG00000014519	-	88	55.274	ENSXCOG00000001538	-	92	45.963	Xiphophorus_couchianus
ENSTNIG00000014519	-	87	79.039	ENSXMAG00000014715	-	83	79.039	Xiphophorus_maculatus
ENSTNIG00000014519	-	88	55.274	ENSXMAG00000005023	-	92	45.963	Xiphophorus_maculatus
ENSTNIG00000014519	-	100	82.624	ENSXMAG00000027171	-	74	67.908	Xiphophorus_maculatus