EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000014523 (Gene tree)
Gene ID: -
Gene Symbol: zc3h13
Alias: zgc:66359
Full Name: zinc finger CCCH-type containing 13
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 9105 bases
Position: chr3:6394858-6403962
Accession: ZDB-GENE-040426-1619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017546	zf-CCCH	PF00642.24	6.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017766	-	4833	-	ENSTNIP00000017546	1610 (aa)	-	H3DAK5

Gene Model

Click here to download ENSTNIG00000014523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014523's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014523	zc3h13	64	68.187	ENSAPOG00000001116	zc3h13	68	69.655	Acanthochromis_polyacanthus
ENSTNIG00000014523	zc3h13	69	84.615	ENSAPEG00000004887	zc3h13	69	85.938	Amphiprion_percula
ENSTNIG00000014523	zc3h13	50	69.196	ENSATEG00000003937	zc3h13	66	79.279	Anabas_testudineus
ENSTNIG00000014523	zc3h13	94	50.886	ENSAPLG00000002707	ZC3H13	70	55.224	Anas_platyrhynchos
ENSTNIG00000014523	zc3h13	93	76.623	ENSACLG00000027909	zc3h13	69	80.183	Astatotilapia_calliptera
ENSTNIG00000014523	zc3h13	58	53.521	ENSCHIG00000020072	ZC3H13	69	53.770	Capra_hircus
ENSTNIG00000014523	zc3h13	56	56.929	ENSTSYG00000000992	ZC3H13	69	54.899	Carlito_syrichta
ENSTNIG00000014523	zc3h13	52	69.421	ENSCHOG00000009724	ZC3H13	60	69.421	Choloepus_hoffmanni
ENSTNIG00000014523	zc3h13	93	63.967	ENSCSEG00000010275	zc3h13	69	80.615	Cynoglossus_semilaevis
ENSTNIG00000014523	zc3h13	76	79.452	ENSCVAG00000014663	zc3h13	65	74.772	Cyprinodon_variegatus
ENSTNIG00000014523	zc3h13	90	56.075	ENSDARG00000037177	zc3h13	66	69.501	Danio_rerio
ENSTNIG00000014523	zc3h13	92	54.878	ENSFALG00000008196	ZC3H13	61	61.372	Ficedula_albicollis
ENSTNIG00000014523	zc3h13	67	52.359	ENSFDAG00000012323	ZC3H13	88	52.601	Fukomys_damarensis
ENSTNIG00000014523	zc3h13	93	82.609	ENSGAFG00000005462	zc3h13	68	82.979	Gambusia_affinis
ENSTNIG00000014523	zc3h13	100	65.461	ENSGACG00000015166	zc3h13	76	80.074	Gasterosteus_aculeatus
ENSTNIG00000014523	zc3h13	93	76.623	ENSHBUG00000007100	zc3h13	70	80.409	Haplochromis_burtoni
ENSTNIG00000014523	zc3h13	69	51.982	ENSHGLG00100007460	ZC3H13	87	53.903	Heterocephalus_glaber_male
ENSTNIG00000014523	zc3h13	63	75.107	ENSIPUG00000021878	zc3h13	63	54.493	Ictalurus_punctatus
ENSTNIG00000014523	zc3h13	66	82.593	ENSKMAG00000010701	zc3h13	55	63.140	Kryptolebias_marmoratus
ENSTNIG00000014523	zc3h13	54	56.667	ENSMMUG00000017025	ZC3H13	69	53.461	Macaca_mulatta
ENSTNIG00000014523	zc3h13	89	69.881	ENSMAMG00000022274	zc3h13	65	80.982	Mastacembelus_armatus
ENSTNIG00000014523	zc3h13	93	76.623	ENSMZEG00005007473	zc3h13	69	80.183	Maylandia_zebra
ENSTNIG00000014523	zc3h13	59	55.597	ENSMGAG00000014996	ZC3H13	87	51.542	Meleagris_gallopavo
ENSTNIG00000014523	zc3h13	93	80.769	ENSMALG00000010585	zc3h13	64	82.209	Monopterus_albus
ENSTNIG00000014523	zc3h13	61	56.716	ENSMLUG00000006920	ZC3H13	90	52.374	Myotis_lucifugus
ENSTNIG00000014523	zc3h13	93	76.623	ENSONIG00000012236	zc3h13	91	71.429	Oreochromis_niloticus
ENSTNIG00000014523	zc3h13	88	58.209	ENSOCUG00000015173	ZC3H13	87	53.382	Oryctolagus_cuniculus
ENSTNIG00000014523	zc3h13	66	72.917	ENSORLG00000005201	zc3h13	70	82.812	Oryzias_latipes
ENSTNIG00000014523	zc3h13	65	72.917	ENSORLG00020016576	zc3h13	70	84.375	Oryzias_latipes_hni
ENSTNIG00000014523	zc3h13	71	84.615	ENSORLG00015014966	zc3h13	70	84.375	Oryzias_latipes_hsok
ENSTNIG00000014523	zc3h13	71	82.051	ENSOMEG00000007044	zc3h13	69	82.090	Oryzias_melastigma
ENSTNIG00000014523	zc3h13	60	53.521	ENSOARG00000007790	ZC3H13	71	54.980	Ovis_aries
ENSTNIG00000014523	zc3h13	85	52.644	ENSPKIG00000019756	zc3h13	65	76.887	Paramormyrops_kingsleyae
ENSTNIG00000014523	zc3h13	52	69.027	ENSPCIG00000029529	ZC3H13	61	69.266	Phascolarctos_cinereus
ENSTNIG00000014523	zc3h13	70	83.784	ENSPFOG00000005039	zc3h13	69	83.333	Poecilia_formosa
ENSTNIG00000014523	zc3h13	70	84.058	ENSPLAG00000014095	zc3h13	70	83.333	Poecilia_latipinna
ENSTNIG00000014523	zc3h13	93	84.058	ENSPMEG00000006928	zc3h13	73	82.979	Poecilia_mexicana
ENSTNIG00000014523	zc3h13	94	82.609	ENSPREG00000010526	zc3h13	70	83.607	Poecilia_reticulata
ENSTNIG00000014523	zc3h13	72	69.027	ENSPCAG00000001146	ZC3H13	71	63.178	Procavia_capensis
ENSTNIG00000014523	zc3h13	61	71.144	ENSPVAG00000012353	ZC3H13	61	70.283	Pteropus_vampyrus
ENSTNIG00000014523	zc3h13	88	69.388	ENSPNYG00000016000	zc3h13	87	78.144	Pundamilia_nyererei
ENSTNIG00000014523	zc3h13	55	56.506	ENSSBOG00000027228	ZC3H13	68	54.853	Saimiri_boliviensis_boliviensis
ENSTNIG00000014523	zc3h13	70	82.051	ENSSMAG00000007110	zc3h13	70	64.638	Scophthalmus_maximus
ENSTNIG00000014523	zc3h13	93	79.487	ENSSDUG00000021808	zc3h13	89	84.356	Seriola_dumerili
ENSTNIG00000014523	zc3h13	82	58.264	ENSSPUG00000013358	ZC3H13	88	58.952	Sphenodon_punctatus
ENSTNIG00000014523	zc3h13	69	83.333	ENSSPAG00000019966	zc3h13	69	84.375	Stegastes_partitus
ENSTNIG00000014523	zc3h13	57	52.595	ENSSSCG00000009414	ZC3H13	55	54.558	Sus_scrofa
ENSTNIG00000014523	zc3h13	70	68.485	ENSTTRG00000003611	ZC3H13	85	67.879	Tursiops_truncatus
ENSTNIG00000014523	zc3h13	82	51.200	ENSVPAG00000005179	ZC3H13	64	51.200	Vicugna_pacos
ENSTNIG00000014523	zc3h13	80	47.205	ENSXETG00000014637	zc3h13	74	59.636	Xenopus_tropicalis
ENSTNIG00000014523	zc3h13	75	77.108	ENSXMAG00000012423	zc3h13	70	85.246	Xiphophorus_maculatus