EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000014666 (Gene tree)
Gene ID: -
Gene Symbol: si:ch1073-335m2.2
Alias: -
Full Name: si:ch1073-335m2.2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 14305 bases
Position: chr11:6580175-6594479
Accession: ZDB-GENE-081104-82
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017694	RRM_5	PF13893.6	4.2e-08	1	2
ENSTNIP00000017694	RRM_5	PF13893.6	4.2e-08	2	2
ENSTNIP00000017694	RRM_1	PF00076.22	1.5e-42	1	3
ENSTNIP00000017694	RRM_1	PF00076.22	1.5e-42	2	3
ENSTNIP00000017694	RRM_1	PF00076.22	1.5e-42	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017917	-	9537	-	ENSTNIP00000017694	3178 (aa)	-	H3DB02

Gene Model

Click here to download ENSTNIG00000014666's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014666's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000014666	si:ch1073-335m2.2	100	68.161	ENSTNIG00000010907	-	98	65.702

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014666	si:ch1073-335m2.2	85	81.871	ENSG00000065526	SPEN	85	85.657	Homo_sapiens
ENSTNIG00000014666	si:ch1073-335m2.2	71	80.337	ENSAPOG00000009853	-	97	80.337	Acanthochromis_polyacanthus
ENSTNIG00000014666	si:ch1073-335m2.2	100	71.902	ENSAPOG00000011411	si:ch1073-335m2.2	100	72.335	Acanthochromis_polyacanthus
ENSTNIG00000014666	si:ch1073-335m2.2	89	69.220	ENSAOCG00000008077	si:ch1073-335m2.2	99	69.220	Amphiprion_ocellaris
ENSTNIG00000014666	si:ch1073-335m2.2	92	80.337	ENSAOCG00000014505	-	97	80.337	Amphiprion_ocellaris
ENSTNIG00000014666	si:ch1073-335m2.2	71	80.337	ENSAPEG00000010288	-	97	80.337	Amphiprion_percula
ENSTNIG00000014666	si:ch1073-335m2.2	100	71.581	ENSAPEG00000013515	si:ch1073-335m2.2	100	71.794	Amphiprion_percula
ENSTNIG00000014666	si:ch1073-335m2.2	72	73.632	ENSATEG00000005627	-	98	67.241	Anabas_testudineus
ENSTNIG00000014666	si:ch1073-335m2.2	100	72.182	ENSATEG00000007674	si:ch1073-335m2.2	100	72.364	Anabas_testudineus
ENSTNIG00000014666	si:ch1073-335m2.2	98	83.041	ENSAPLG00000012618	SPEN	95	83.041	Anas_platyrhynchos
ENSTNIG00000014666	si:ch1073-335m2.2	72	75.385	ENSACAG00000013761	SPEN	70	73.267	Anolis_carolinensis
ENSTNIG00000014666	si:ch1073-335m2.2	85	81.871	ENSANAG00000034428	SPEN	88	81.871	Aotus_nancymaae
ENSTNIG00000014666	si:ch1073-335m2.2	100	68.408	ENSACLG00000021433	si:ch1073-335m2.2	100	68.327	Astatotilapia_calliptera
ENSTNIG00000014666	si:ch1073-335m2.2	93	80.337	ENSACLG00000016922	-	98	80.337	Astatotilapia_calliptera
ENSTNIG00000014666	si:ch1073-335m2.2	95	77.143	ENSAMXG00000012485	spen	100	43.321	Astyanax_mexicanus
ENSTNIG00000014666	si:ch1073-335m2.2	50	82.456	ENSBTAG00000018729	SPEN	82	82.456	Bos_taurus
ENSTNIG00000014666	si:ch1073-335m2.2	75	82.456	ENSCJAG00000008527	SPEN	77	82.456	Callithrix_jacchus
ENSTNIG00000014666	si:ch1073-335m2.2	50	83.041	ENSCHIG00000025070	SPEN	73	83.041	Capra_hircus
ENSTNIG00000014666	si:ch1073-335m2.2	66	80.226	ENSTSYG00000036016	SPEN	75	82.456	Carlito_syrichta
ENSTNIG00000014666	si:ch1073-335m2.2	65	82.456	ENSCCAG00000020258	SPEN	77	82.456	Cebus_capucinus
ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	ENSCATG00000015079	SPEN	79	82.456	Cercocebus_atys
ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	ENSCSAG00000000841	SPEN	86	82.456	Chlorocebus_sabaeus
ENSTNIG00000014666	si:ch1073-335m2.2	93	80.791	ENSCPBG00000010477	SPEN	89	80.791	Chrysemys_picta_bellii
ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	ENSCANG00000034547	SPEN	79	82.456	Colobus_angolensis_palliatus
ENSTNIG00000014666	si:ch1073-335m2.2	84	82.353	ENSCGRG00001007725	Spen	89	82.353	Cricetulus_griseus_chok1gshd
ENSTNIG00000014666	si:ch1073-335m2.2	74	82.353	ENSCGRG00000010581	Spen	89	82.353	Cricetulus_griseus_crigri
ENSTNIG00000014666	si:ch1073-335m2.2	99	79.006	ENSCVAG00000016346	-	94	71.770	Cyprinodon_variegatus
ENSTNIG00000014666	si:ch1073-335m2.2	100	65.428	ENSCVAG00000009075	si:ch1073-335m2.2	100	65.518	Cyprinodon_variegatus
ENSTNIG00000014666	si:ch1073-335m2.2	59	58.006	ENSDARG00000074332	si:ch1073-335m2.2	61	58.535	Danio_rerio
ENSTNIG00000014666	si:ch1073-335m2.2	74	61.069	ENSDARG00000074245	spen	100	80.741	Danio_rerio
ENSTNIG00000014666	si:ch1073-335m2.2	52	82.456	ENSDNOG00000041948	SPEN	74	82.456	Dasypus_novemcinctus
ENSTNIG00000014666	si:ch1073-335m2.2	83	82.456	ENSDORG00000023909	Spen	84	82.456	Dipodomys_ordii
ENSTNIG00000014666	si:ch1073-335m2.2	81	83.041	ENSEASG00005015911	SPEN	74	83.041	Equus_asinus_asinus
ENSTNIG00000014666	si:ch1073-335m2.2	81	83.041	ENSECAG00000008833	SPEN	74	83.041	Equus_caballus
ENSTNIG00000014666	si:ch1073-335m2.2	59	81.395	ENSEEUG00000010255	SPEN	59	81.395	Erinaceus_europaeus
ENSTNIG00000014666	si:ch1073-335m2.2	100	60.269	ENSELUG00000007726	si:ch1073-335m2.2	95	71.473	Esox_lucius
ENSTNIG00000014666	si:ch1073-335m2.2	59	82.456	ENSFALG00000003551	SPEN	96	82.456	Ficedula_albicollis
ENSTNIG00000014666	si:ch1073-335m2.2	74	82.249	ENSFDAG00000010212	SPEN	71	82.249	Fukomys_damarensis
ENSTNIG00000014666	si:ch1073-335m2.2	100	66.147	ENSFHEG00000004544	si:ch1073-335m2.2	100	66.147	Fundulus_heteroclitus
ENSTNIG00000014666	si:ch1073-335m2.2	100	63.606	ENSGMOG00000008156	si:ch1073-335m2.2	100	63.332	Gadus_morhua
ENSTNIG00000014666	si:ch1073-335m2.2	73	71.144	ENSGMOG00000008397	-	93	79.191	Gadus_morhua
ENSTNIG00000014666	si:ch1073-335m2.2	100	66.106	ENSGAFG00000021570	si:ch1073-335m2.2	100	66.116	Gambusia_affinis
ENSTNIG00000014666	si:ch1073-335m2.2	100	79.006	ENSGAFG00000015819	-	99	62.109	Gambusia_affinis
ENSTNIG00000014666	si:ch1073-335m2.2	100	62.403	ENSGACG00000005341	-	100	62.403	Gasterosteus_aculeatus
ENSTNIG00000014666	si:ch1073-335m2.2	100	70.173	ENSGACG00000001176	si:ch1073-335m2.2	100	70.323	Gasterosteus_aculeatus
ENSTNIG00000014666	si:ch1073-335m2.2	73	75.385	ENSGAGG00000020785	SPEN	70	75.385	Gopherus_agassizii
ENSTNIG00000014666	si:ch1073-335m2.2	85	81.871	ENSGGOG00000012041	SPEN	80	81.871	Gorilla_gorilla
ENSTNIG00000014666	si:ch1073-335m2.2	100	68.488	ENSHBUG00000023253	si:ch1073-335m2.2	100	68.387	Haplochromis_burtoni
ENSTNIG00000014666	si:ch1073-335m2.2	93	80.337	ENSHBUG00000020626	-	98	80.337	Haplochromis_burtoni
ENSTNIG00000014666	si:ch1073-335m2.2	76	82.840	ENSHGLG00000019259	SPEN	73	82.840	Heterocephalus_glaber_female
ENSTNIG00000014666	si:ch1073-335m2.2	63	82.840	ENSHGLG00100019294	SPEN	65	82.840	Heterocephalus_glaber_male
ENSTNIG00000014666	si:ch1073-335m2.2	97	65.433	ENSHCOG00000006004	si:ch1073-335m2.2	99	65.338	Hippocampus_comes
ENSTNIG00000014666	si:ch1073-335m2.2	73	65.939	ENSIPUG00000021668	spen	98	65.939	Ictalurus_punctatus
ENSTNIG00000014666	si:ch1073-335m2.2	96	53.302	ENSIPUG00000018212	si:ch1073-335m2.2	99	54.116	Ictalurus_punctatus
ENSTNIG00000014666	si:ch1073-335m2.2	84	82.456	ENSSTOG00000021428	SPEN	88	82.456	Ictidomys_tridecemlineatus
ENSTNIG00000014666	si:ch1073-335m2.2	85	81.871	ENSJJAG00000010882	Spen	92	81.871	Jaculus_jaculus
ENSTNIG00000014666	si:ch1073-335m2.2	100	68.145	ENSKMAG00000021725	si:ch1073-335m2.2	100	68.053	Kryptolebias_marmoratus
ENSTNIG00000014666	si:ch1073-335m2.2	83	78.090	ENSLBEG00000019129	-	96	78.090	Labrus_bergylta
ENSTNIG00000014666	si:ch1073-335m2.2	100	45.465	ENSLACG00000003258	SPEN	89	83.041	Latimeria_chalumnae
ENSTNIG00000014666	si:ch1073-335m2.2	99	81.395	ENSLOCG00000007896	si:ch1073-335m2.2	97	70.616	Lepisosteus_oculatus
ENSTNIG00000014666	si:ch1073-335m2.2	76	83.432	ENSLAFG00000004524	SPEN	78	83.432	Loxodonta_africana
ENSTNIG00000014666	si:ch1073-335m2.2	72	82.456	ENSMFAG00000041974	SPEN	66	82.456	Macaca_fascicularis
ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	ENSMMUG00000008026	SPEN	80	82.456	Macaca_mulatta
ENSTNIG00000014666	si:ch1073-335m2.2	84	82.456	ENSMNEG00000042402	SPEN	79	82.456	Macaca_nemestrina
ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	ENSMLEG00000039293	SPEN	79	82.456	Mandrillus_leucophaeus
ENSTNIG00000014666	si:ch1073-335m2.2	100	71.459	ENSMAMG00000023870	si:ch1073-335m2.2	100	71.489	Mastacembelus_armatus
ENSTNIG00000014666	si:ch1073-335m2.2	100	68.387	ENSMZEG00005011762	si:ch1073-335m2.2	100	68.367	Maylandia_zebra
ENSTNIG00000014666	si:ch1073-335m2.2	87	82.456	ENSMAUG00000008318	Spen	91	63.241	Mesocricetus_auratus
ENSTNIG00000014666	si:ch1073-335m2.2	86	71.770	ENSMICG00000030994	SPEN	79	71.770	Microcebus_murinus
ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	ENSMOCG00000016083	Spen	90	82.456	Microtus_ochrogaster
ENSTNIG00000014666	si:ch1073-335m2.2	100	75.100	ENSMMOG00000021742	si:ch1073-335m2.2	100	74.329	Mola_mola
ENSTNIG00000014666	si:ch1073-335m2.2	71	79.775	ENSMALG00000008625	-	72	64.583	Monopterus_albus
ENSTNIG00000014666	si:ch1073-335m2.2	76	82.456	ENSMUSG00000040761	Spen	90	82.456	Mus_musculus
ENSTNIG00000014666	si:ch1073-335m2.2	82	80.208	ENSMLUG00000010144	SPEN	99	67.532	Myotis_lucifugus
ENSTNIG00000014666	si:ch1073-335m2.2	92	71.770	ENSNGAG00000000641	Spen	92	71.770	Nannospalax_galili
ENSTNIG00000014666	si:ch1073-335m2.2	100	67.995	ENSNBRG00000005733	si:ch1073-335m2.2	100	67.803	Neolamprologus_brichardi
ENSTNIG00000014666	si:ch1073-335m2.2	83	81.871	ENSNLEG00000007652	SPEN	89	81.871	Nomascus_leucogenys
ENSTNIG00000014666	si:ch1073-335m2.2	75	78.947	ENSMEUG00000002422	SPEN	70	78.947	Notamacropus_eugenii
ENSTNIG00000014666	si:ch1073-335m2.2	58	82.456	ENSOPRG00000015800	SPEN	71	82.456	Ochotona_princeps
ENSTNIG00000014666	si:ch1073-335m2.2	62	82.840	ENSODEG00000016644	SPEN	92	82.840	Octodon_degus
ENSTNIG00000014666	si:ch1073-335m2.2	75	82.456	ENSOCUG00000010840	SPEN	79	82.456	Oryctolagus_cuniculus
ENSTNIG00000014666	si:ch1073-335m2.2	72	32.754	ENSORLG00000028894	-	77	69.585	Oryzias_latipes
ENSTNIG00000014666	si:ch1073-335m2.2	100	66.697	ENSORLG00000018414	si:ch1073-335m2.2	100	66.839	Oryzias_latipes
ENSTNIG00000014666	si:ch1073-335m2.2	100	66.707	ENSORLG00020009351	si:ch1073-335m2.2	100	66.870	Oryzias_latipes_hni
ENSTNIG00000014666	si:ch1073-335m2.2	87	38.648	ENSORLG00020007735	-	85	33.295	Oryzias_latipes_hni
ENSTNIG00000014666	si:ch1073-335m2.2	100	66.585	ENSORLG00015005537	si:ch1073-335m2.2	100	66.748	Oryzias_latipes_hsok
ENSTNIG00000014666	si:ch1073-335m2.2	93	43.695	ENSOMEG00000007639	-	72	65.432	Oryzias_melastigma
ENSTNIG00000014666	si:ch1073-335m2.2	100	67.500	ENSOMEG00000004509	si:ch1073-335m2.2	100	67.672	Oryzias_melastigma
ENSTNIG00000014666	si:ch1073-335m2.2	84	82.456	ENSOGAG00000025110	SPEN	78	71.770	Otolemur_garnettii
ENSTNIG00000014666	si:ch1073-335m2.2	84	81.871	ENSPPAG00000035690	SPEN	78	81.871	Pan_paniscus
ENSTNIG00000014666	si:ch1073-335m2.2	85	81.871	ENSPTRG00000000210	SPEN	78	81.871	Pan_troglodytes
ENSTNIG00000014666	si:ch1073-335m2.2	85	82.456	ENSPANG00000006293	SPEN	79	82.456	Papio_anubis
ENSTNIG00000014666	si:ch1073-335m2.2	96	92.857	ENSPKIG00000010492	si:ch1073-335m2.2	97	92.857	Paramormyrops_kingsleyae
ENSTNIG00000014666	si:ch1073-335m2.2	97	59.256	ENSPKIG00000002617	SPEN	91	69.318	Paramormyrops_kingsleyae
ENSTNIG00000014666	si:ch1073-335m2.2	99	80.791	ENSPSIG00000008026	SPEN	96	80.791	Pelodiscus_sinensis
ENSTNIG00000014666	si:ch1073-335m2.2	51	82.456	ENSPEMG00000022997	Spen	88	82.456	Peromyscus_maniculatus_bairdii
ENSTNIG00000014666	si:ch1073-335m2.2	100	65.761	ENSPLAG00000016625	si:ch1073-335m2.2	100	65.811	Poecilia_latipinna
ENSTNIG00000014666	si:ch1073-335m2.2	100	62.109	ENSPMEG00000006764	-	98	62.109	Poecilia_mexicana
ENSTNIG00000014666	si:ch1073-335m2.2	100	65.528	ENSPREG00000005357	si:ch1073-335m2.2	100	65.731	Poecilia_reticulata
ENSTNIG00000014666	si:ch1073-335m2.2	99	71.292	ENSPREG00000010399	-	97	71.292	Poecilia_reticulata
ENSTNIG00000014666	si:ch1073-335m2.2	85	81.871	ENSPPYG00000001834	SPEN	89	81.871	Pongo_abelii
ENSTNIG00000014666	si:ch1073-335m2.2	67	81.871	ENSPCAG00000009543	SPEN	74	81.871	Procavia_capensis
ENSTNIG00000014666	si:ch1073-335m2.2	84	79.070	ENSPCOG00000021735	SPEN	88	79.070	Propithecus_coquereli
ENSTNIG00000014666	si:ch1073-335m2.2	63	80.702	ENSPVAG00000013794	SPEN	57	80.702	Pteropus_vampyrus
ENSTNIG00000014666	si:ch1073-335m2.2	100	68.439	ENSPNYG00000009042	si:ch1073-335m2.2	100	68.357	Pundamilia_nyererei
ENSTNIG00000014666	si:ch1073-335m2.2	93	80.337	ENSPNYG00000012379	-	98	80.337	Pundamilia_nyererei
ENSTNIG00000014666	si:ch1073-335m2.2	100	55.516	ENSPNAG00000011452	si:ch1073-335m2.2	100	55.784	Pygocentrus_nattereri
ENSTNIG00000014666	si:ch1073-335m2.2	98	80.473	ENSPNAG00000020795	spen	97	80.473	Pygocentrus_nattereri
ENSTNIG00000014666	si:ch1073-335m2.2	84	82.456	ENSRBIG00000039654	SPEN	80	82.456	Rhinopithecus_bieti
ENSTNIG00000014666	si:ch1073-335m2.2	84	82.456	ENSRROG00000035686	SPEN	79	82.456	Rhinopithecus_roxellana
ENSTNIG00000014666	si:ch1073-335m2.2	70	82.456	ENSSBOG00000028770	SPEN	78	82.456	Saimiri_boliviensis_boliviensis
ENSTNIG00000014666	si:ch1073-335m2.2	100	46.444	ENSSFOG00015010267	si:ch1073-335m2.2	100	46.731	Scleropages_formosus
ENSTNIG00000014666	si:ch1073-335m2.2	85	81.461	ENSSFOG00015007131	si:ch1073-335m2.2	93	81.461	Scleropages_formosus
ENSTNIG00000014666	si:ch1073-335m2.2	100	71.935	ENSSMAG00000000125	si:ch1073-335m2.2	100	72.147	Scophthalmus_maximus
ENSTNIG00000014666	si:ch1073-335m2.2	99	79.651	ENSSMAG00000008996	-	98	67.382	Scophthalmus_maximus
ENSTNIG00000014666	si:ch1073-335m2.2	100	73.714	ENSSDUG00000008416	si:ch1073-335m2.2	100	73.926	Seriola_dumerili
ENSTNIG00000014666	si:ch1073-335m2.2	71	80.899	ENSSDUG00000003476	-	97	80.899	Seriola_dumerili
ENSTNIG00000014666	si:ch1073-335m2.2	100	71.105	ENSSLDG00000023347	si:ch1073-335m2.2	100	70.992	Seriola_lalandi_dorsalis
ENSTNIG00000014666	si:ch1073-335m2.2	71	80.899	ENSSLDG00000012950	-	97	80.899	Seriola_lalandi_dorsalis
ENSTNIG00000014666	si:ch1073-335m2.2	80	80.791	ENSSPUG00000001866	-	95	80.791	Sphenodon_punctatus
ENSTNIG00000014666	si:ch1073-335m2.2	100	72.396	ENSSPAG00000012454	si:ch1073-335m2.2	100	72.609	Stegastes_partitus
ENSTNIG00000014666	si:ch1073-335m2.2	87	83.438	ENSTRUG00000021008	si:ch1073-335m2.2	100	83.229	Takifugu_rubripes
ENSTNIG00000014666	si:ch1073-335m2.2	100	65.833	ENSTRUG00000024350	-	96	66.369	Takifugu_rubripes
ENSTNIG00000014666	si:ch1073-335m2.2	64	82.456	ENSTBEG00000003628	SPEN	59	82.456	Tupaia_belangeri
ENSTNIG00000014666	si:ch1073-335m2.2	71	92.857	ENSVVUG00000028951	SPEN	70	92.857	Vulpes_vulpes
ENSTNIG00000014666	si:ch1073-335m2.2	74	82.249	ENSXETG00000023114	SPEN	91	82.249	Xenopus_tropicalis
ENSTNIG00000014666	si:ch1073-335m2.2	100	63.333	ENSXCOG00000004516	si:ch1073-335m2.2	100	63.528	Xiphophorus_couchianus
ENSTNIG00000014666	si:ch1073-335m2.2	100	66.361	ENSXMAG00000029887	si:ch1073-335m2.2	100	66.432	Xiphophorus_maculatus
ENSTNIG00000014666	si:ch1073-335m2.2	78	79.651	ENSXMAG00000021384	-	91	69.349	Xiphophorus_maculatus