EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000014676 (Gene tree)
Gene ID: -
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2399 bases
Position: chr11:6542078-6544476
Accession: ZDB-GENE-040801-238
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017704	PseudoU_synth_2	PF00849.22	5.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000017927	-	1402	-	ENSTNIP00000017704	388 (aa)	-	Q4RXL3

Gene Model

Click here to download ENSTNIG00000014676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014676's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014676	rpusd4	83	49.541	ENSG00000165526	RPUSD4	87	49.096	Homo_sapiens
ENSTNIG00000014676	rpusd4	98	66.927	ENSAPOG00000011024	rpusd4	97	66.927	Acanthochromis_polyacanthus
ENSTNIG00000014676	rpusd4	84	51.818	ENSAMEG00000000127	-	86	51.818	Ailuropoda_melanoleuca
ENSTNIG00000014676	rpusd4	60	57.576	ENSAMEG00000005953	-	94	57.576	Ailuropoda_melanoleuca
ENSTNIG00000014676	rpusd4	83	72.360	ENSACIG00000003533	rpusd4	95	72.360	Amphilophus_citrinellus
ENSTNIG00000014676	rpusd4	98	66.841	ENSAOCG00000015409	rpusd4	95	66.841	Amphiprion_ocellaris
ENSTNIG00000014676	rpusd4	98	67.363	ENSAPEG00000018935	rpusd4	95	67.363	Amphiprion_percula
ENSTNIG00000014676	rpusd4	98	67.801	ENSATEG00000008059	rpusd4	95	67.801	Anabas_testudineus
ENSTNIG00000014676	rpusd4	72	49.645	ENSAPLG00000013250	RPUSD4	96	49.823	Anas_platyrhynchos
ENSTNIG00000014676	rpusd4	93	46.027	ENSACAG00000000189	RPUSD4	96	46.027	Anolis_carolinensis
ENSTNIG00000014676	rpusd4	88	46.974	ENSANAG00000024050	RPUSD4	92	46.974	Aotus_nancymaae
ENSTNIG00000014676	rpusd4	99	65.891	ENSACLG00000020996	rpusd4	99	65.891	Astatotilapia_calliptera
ENSTNIG00000014676	rpusd4	85	57.270	ENSAMXG00000031479	rpusd4	94	57.270	Astyanax_mexicanus
ENSTNIG00000014676	rpusd4	83	52.160	ENSBTAG00000020900	RPUSD4	84	52.160	Bos_taurus
ENSTNIG00000014676	rpusd4	87	47.674	ENSCJAG00000042850	RPUSD4	85	47.674	Callithrix_jacchus
ENSTNIG00000014676	rpusd4	86	51.613	ENSCAFG00000010488	RPUSD4	86	52.424	Canis_familiaris
ENSTNIG00000014676	rpusd4	86	51.613	ENSCAFG00020010621	RPUSD4	86	52.424	Canis_lupus_dingo
ENSTNIG00000014676	rpusd4	83	51.543	ENSCHIG00000009975	RPUSD4	84	51.543	Capra_hircus
ENSTNIG00000014676	rpusd4	86	49.555	ENSTSYG00000008456	RPUSD4	89	49.555	Carlito_syrichta
ENSTNIG00000014676	rpusd4	62	50.000	ENSCAPG00000006040	RPUSD4	92	50.000	Cavia_aperea
ENSTNIG00000014676	rpusd4	89	50.716	ENSCPOG00000014971	RPUSD4	89	50.716	Cavia_porcellus
ENSTNIG00000014676	rpusd4	87	47.674	ENSCCAG00000027838	RPUSD4	91	47.674	Cebus_capucinus
ENSTNIG00000014676	rpusd4	86	47.647	ENSCATG00000041570	RPUSD4	89	47.647	Cercocebus_atys
ENSTNIG00000014676	rpusd4	88	49.568	ENSCLAG00000016553	RPUSD4	90	49.568	Chinchilla_lanigera
ENSTNIG00000014676	rpusd4	84	48.795	ENSCSAG00000002274	RPUSD4	87	48.795	Chlorocebus_sabaeus
ENSTNIG00000014676	rpusd4	71	51.264	ENSCHOG00000010249	RPUSD4	96	51.264	Choloepus_hoffmanni
ENSTNIG00000014676	rpusd4	73	52.778	ENSCPBG00000011175	RPUSD4	98	52.778	Chrysemys_picta_bellii
ENSTNIG00000014676	rpusd4	81	35.802	ENSCSAVG00000000872	-	62	35.802	Ciona_savignyi
ENSTNIG00000014676	rpusd4	93	46.301	ENSCANG00000039684	RPUSD4	94	46.301	Colobus_angolensis_palliatus
ENSTNIG00000014676	rpusd4	90	49.020	ENSCGRG00001024141	Rpusd4	93	49.020	Cricetulus_griseus_chok1gshd
ENSTNIG00000014676	rpusd4	90	49.020	ENSCGRG00000014415	Rpusd4	93	49.020	Cricetulus_griseus_crigri
ENSTNIG00000014676	rpusd4	51	58.586	ENSCSEG00000006462	-	88	58.586	Cynoglossus_semilaevis
ENSTNIG00000014676	rpusd4	98	64.599	ENSCVAG00000008761	rpusd4	98	64.599	Cyprinodon_variegatus
ENSTNIG00000014676	rpusd4	98	63.896	ENSCVAG00000000392	rpusd4	97	69.027	Cyprinodon_variegatus
ENSTNIG00000014676	rpusd4	78	60.526	ENSDARG00000012674	rpusd4	91	58.896	Danio_rerio
ENSTNIG00000014676	rpusd4	87	49.565	ENSDNOG00000020026	RPUSD4	90	49.565	Dasypus_novemcinctus
ENSTNIG00000014676	rpusd4	84	50.303	ENSDORG00000016717	Rpusd4	86	50.606	Dipodomys_ordii
ENSTNIG00000014676	rpusd4	84	51.212	ENSETEG00000013953	RPUSD4	87	51.212	Echinops_telfairi
ENSTNIG00000014676	rpusd4	88	49.422	ENSEASG00005022982	RPUSD4	90	49.422	Equus_asinus_asinus
ENSTNIG00000014676	rpusd4	89	49.143	ENSECAG00000000557	RPUSD4	90	49.143	Equus_caballus
ENSTNIG00000014676	rpusd4	69	57.222	ENSEEUG00000014036	RPUSD4	71	57.222	Erinaceus_europaeus
ENSTNIG00000014676	rpusd4	85	59.710	ENSELUG00000008075	rpusd4	89	59.710	Esox_lucius
ENSTNIG00000014676	rpusd4	84	50.909	ENSFCAG00000029789	RPUSD4	86	50.909	Felis_catus
ENSTNIG00000014676	rpusd4	82	47.531	ENSFALG00000005171	RPUSD4	95	47.531	Ficedula_albicollis
ENSTNIG00000014676	rpusd4	88	48.718	ENSFDAG00000014307	RPUSD4	92	48.718	Fukomys_damarensis
ENSTNIG00000014676	rpusd4	89	71.552	ENSFHEG00000004329	rpusd4	90	71.552	Fundulus_heteroclitus
ENSTNIG00000014676	rpusd4	82	61.059	ENSGMOG00000017726	rpusd4	99	59.760	Gadus_morhua
ENSTNIG00000014676	rpusd4	73	51.916	ENSGALG00000024326	RPUSD4	97	46.418	Gallus_gallus
ENSTNIG00000014676	rpusd4	89	69.209	ENSGAFG00000021559	rpusd4	91	69.209	Gambusia_affinis
ENSTNIG00000014676	rpusd4	86	69.940	ENSGACG00000001657	rpusd4	100	70.833	Gasterosteus_aculeatus
ENSTNIG00000014676	rpusd4	82	49.383	ENSGAGG00000000132	RPUSD4	89	49.383	Gopherus_agassizii
ENSTNIG00000014676	rpusd4	83	49.541	ENSGGOG00000016494	RPUSD4	87	49.096	Gorilla_gorilla
ENSTNIG00000014676	rpusd4	99	65.891	ENSHBUG00000022838	rpusd4	99	65.891	Haplochromis_burtoni
ENSTNIG00000014676	rpusd4	96	46.579	ENSHGLG00000002285	RPUSD4	96	46.579	Heterocephalus_glaber_female
ENSTNIG00000014676	rpusd4	96	46.579	ENSHGLG00100006385	RPUSD4	96	46.579	Heterocephalus_glaber_male
ENSTNIG00000014676	rpusd4	99	64.781	ENSHCOG00000006612	rpusd4	99	64.781	Hippocampus_comes
ENSTNIG00000014676	rpusd4	97	52.480	ENSIPUG00000023879	rusd4	99	52.480	Ictalurus_punctatus
ENSTNIG00000014676	rpusd4	87	50.877	ENSSTOG00000025280	RPUSD4	93	50.877	Ictidomys_tridecemlineatus
ENSTNIG00000014676	rpusd4	87	50.437	ENSJJAG00000018673	Rpusd4	91	50.437	Jaculus_jaculus
ENSTNIG00000014676	rpusd4	88	70.520	ENSKMAG00000021805	rpusd4	90	70.520	Kryptolebias_marmoratus
ENSTNIG00000014676	rpusd4	95	67.005	ENSLBEG00000020394	rpusd4	93	75.904	Labrus_bergylta
ENSTNIG00000014676	rpusd4	83	54.462	ENSLACG00000011028	RPUSD4	88	52.101	Latimeria_chalumnae
ENSTNIG00000014676	rpusd4	83	44.985	ENSLOCG00000003124	rpusd4	87	44.985	Lepisosteus_oculatus
ENSTNIG00000014676	rpusd4	88	48.406	ENSLAFG00000005211	RPUSD4	100	43.729	Loxodonta_africana
ENSTNIG00000014676	rpusd4	86	47.941	ENSMFAG00000039513	RPUSD4	89	47.941	Macaca_fascicularis
ENSTNIG00000014676	rpusd4	86	47.647	ENSMMUG00000007933	RPUSD4	89	47.647	Macaca_mulatta
ENSTNIG00000014676	rpusd4	86	47.941	ENSMNEG00000027414	RPUSD4	89	47.941	Macaca_nemestrina
ENSTNIG00000014676	rpusd4	84	48.494	ENSMLEG00000042461	RPUSD4	87	48.494	Mandrillus_leucophaeus
ENSTNIG00000014676	rpusd4	90	70.308	ENSMAMG00000023839	rpusd4	93	70.308	Mastacembelus_armatus
ENSTNIG00000014676	rpusd4	99	66.150	ENSMZEG00005011999	rpusd4	99	66.150	Maylandia_zebra
ENSTNIG00000014676	rpusd4	72	50.877	ENSMGAG00000000840	RPUSD4	99	47.385	Meleagris_gallopavo
ENSTNIG00000014676	rpusd4	90	48.179	ENSMAUG00000010280	Rpusd4	93	48.179	Mesocricetus_auratus
ENSTNIG00000014676	rpusd4	84	50.606	ENSMICG00000015979	RPUSD4	89	53.156	Microcebus_murinus
ENSTNIG00000014676	rpusd4	89	47.159	ENSMOCG00000000661	Rpusd4	92	47.159	Microtus_ochrogaster
ENSTNIG00000014676	rpusd4	78	76.568	ENSMMOG00000021731	rpusd4	91	76.568	Mola_mola
ENSTNIG00000014676	rpusd4	79	50.641	ENSMODG00000004521	RPUSD4	79	50.641	Monodelphis_domestica
ENSTNIG00000014676	rpusd4	80	76.375	ENSMALG00000005839	rpusd4	96	75.472	Monopterus_albus
ENSTNIG00000014676	rpusd4	84	50.303	MGP_CAROLIEiJ_G0031954	Rpusd4	86	50.303	Mus_caroli
ENSTNIG00000014676	rpusd4	84	50.000	ENSMUSG00000032044	Rpusd4	86	50.000	Mus_musculus
ENSTNIG00000014676	rpusd4	84	50.000	MGP_PahariEiJ_G0014819	Rpusd4	86	50.000	Mus_pahari
ENSTNIG00000014676	rpusd4	84	49.697	MGP_SPRETEiJ_G0033078	Rpusd4	86	49.697	Mus_spretus
ENSTNIG00000014676	rpusd4	96	48.800	ENSMPUG00000006608	RPUSD4	93	48.800	Mustela_putorius_furo
ENSTNIG00000014676	rpusd4	66	50.965	ENSMLUG00000029348	-	100	50.965	Myotis_lucifugus
ENSTNIG00000014676	rpusd4	81	51.097	ENSMLUG00000017328	-	83	51.097	Myotis_lucifugus
ENSTNIG00000014676	rpusd4	90	50.420	ENSNGAG00000020847	Rpusd4	93	50.420	Nannospalax_galili
ENSTNIG00000014676	rpusd4	83	73.994	ENSNBRG00000005207	rpusd4	94	73.994	Neolamprologus_brichardi
ENSTNIG00000014676	rpusd4	86	47.647	ENSNLEG00000007465	RPUSD4	89	47.647	Nomascus_leucogenys
ENSTNIG00000014676	rpusd4	82	50.462	ENSMEUG00000004370	RPUSD4	86	50.462	Notamacropus_eugenii
ENSTNIG00000014676	rpusd4	88	48.703	ENSODEG00000004577	RPUSD4	90	48.703	Octodon_degus
ENSTNIG00000014676	rpusd4	99	66.408	ENSONIG00000018879	rpusd4	99	66.408	Oreochromis_niloticus
ENSTNIG00000014676	rpusd4	75	48.658	ENSOANG00000007247	RPUSD4	95	48.344	Ornithorhynchus_anatinus
ENSTNIG00000014676	rpusd4	88	49.422	ENSOCUG00000017039	RPUSD4	90	49.422	Oryctolagus_cuniculus
ENSTNIG00000014676	rpusd4	92	63.215	ENSORLG00000002750	rpusd4	91	66.967	Oryzias_latipes
ENSTNIG00000014676	rpusd4	91	63.305	ENSORLG00020002044	rpusd4	92	62.192	Oryzias_latipes_hni
ENSTNIG00000014676	rpusd4	91	62.570	ENSORLG00015020034	rpusd4	92	61.475	Oryzias_latipes_hsok
ENSTNIG00000014676	rpusd4	93	63.904	ENSOMEG00000004861	rpusd4	92	63.904	Oryzias_melastigma
ENSTNIG00000014676	rpusd4	81	51.077	ENSOGAG00000008922	RPUSD4	85	51.524	Otolemur_garnettii
ENSTNIG00000014676	rpusd4	83	51.543	ENSOARG00000012238	RPUSD4	83	51.543	Ovis_aries
ENSTNIG00000014676	rpusd4	83	49.541	ENSPPAG00000042883	RPUSD4	81	49.096	Pan_paniscus
ENSTNIG00000014676	rpusd4	84	50.909	ENSPPRG00000003081	RPUSD4	86	50.909	Panthera_pardus
ENSTNIG00000014676	rpusd4	84	50.909	ENSPTIG00000012059	RPUSD4	86	52.288	Panthera_tigris_altaica
ENSTNIG00000014676	rpusd4	83	49.541	ENSPTRG00000004454	RPUSD4	87	49.096	Pan_troglodytes
ENSTNIG00000014676	rpusd4	86	47.941	ENSPANG00000015040	RPUSD4	89	47.941	Papio_anubis
ENSTNIG00000014676	rpusd4	93	55.647	ENSPKIG00000023986	rpusd4	92	55.647	Paramormyrops_kingsleyae
ENSTNIG00000014676	rpusd4	77	51.987	ENSPSIG00000014268	RPUSD4	95	51.987	Pelodiscus_sinensis
ENSTNIG00000014676	rpusd4	86	66.071	ENSPMGG00000002806	rpusd4	94	64.970	Periophthalmus_magnuspinnatus
ENSTNIG00000014676	rpusd4	84	43.030	ENSPEMG00000000278	Rpusd4	85	43.030	Peromyscus_maniculatus_bairdii
ENSTNIG00000014676	rpusd4	79	40.476	ENSPMAG00000008183	rpusd4	97	40.476	Petromyzon_marinus
ENSTNIG00000014676	rpusd4	82	50.920	ENSPCIG00000010212	RPUSD4	88	50.920	Phascolarctos_cinereus
ENSTNIG00000014676	rpusd4	95	65.252	ENSPFOG00000019030	rpusd4	98	65.252	Poecilia_formosa
ENSTNIG00000014676	rpusd4	100	64.051	ENSPLAG00000016848	rpusd4	99	64.051	Poecilia_latipinna
ENSTNIG00000014676	rpusd4	100	63.544	ENSPMEG00000017534	rpusd4	99	63.544	Poecilia_mexicana
ENSTNIG00000014676	rpusd4	86	68.805	ENSPREG00000005689	rpusd4	89	68.805	Poecilia_reticulata
ENSTNIG00000014676	rpusd4	84	48.193	ENSPPYG00000004043	RPUSD4	87	48.193	Pongo_abelii
ENSTNIG00000014676	rpusd4	68	54.444	ENSPCAG00000000753	RPUSD4	72	54.444	Procavia_capensis
ENSTNIG00000014676	rpusd4	86	48.071	ENSPCOG00000020694	RPUSD4	89	48.071	Propithecus_coquereli
ENSTNIG00000014676	rpusd4	88	48.424	ENSPVAG00000000988	RPUSD4	92	48.424	Pteropus_vampyrus
ENSTNIG00000014676	rpusd4	89	71.014	ENSPNYG00000009652	rpusd4	89	71.014	Pundamilia_nyererei
ENSTNIG00000014676	rpusd4	97	52.618	ENSPNAG00000012264	rpusd4	98	52.618	Pygocentrus_nattereri
ENSTNIG00000014676	rpusd4	88	48.711	ENSRNOG00000011567	Rpusd4	88	48.711	Rattus_norvegicus
ENSTNIG00000014676	rpusd4	85	48.204	ENSRBIG00000034842	RPUSD4	89	47.647	Rhinopithecus_bieti
ENSTNIG00000014676	rpusd4	85	48.204	ENSRROG00000039753	RPUSD4	89	47.647	Rhinopithecus_roxellana
ENSTNIG00000014676	rpusd4	84	47.590	ENSSBOG00000030413	RPUSD4	88	47.590	Saimiri_boliviensis_boliviensis
ENSTNIG00000014676	rpusd4	77	50.993	ENSSHAG00000008304	RPUSD4	98	50.993	Sarcophilus_harrisii
ENSTNIG00000014676	rpusd4	83	56.667	ENSSFOG00015006203	rpusd4	89	56.970	Scleropages_formosus
ENSTNIG00000014676	rpusd4	99	66.062	ENSSMAG00000020978	rpusd4	99	66.062	Scophthalmus_maximus
ENSTNIG00000014676	rpusd4	96	69.519	ENSSDUG00000013399	rpusd4	97	69.519	Seriola_dumerili
ENSTNIG00000014676	rpusd4	96	69.786	ENSSLDG00000023507	rpusd4	97	69.786	Seriola_lalandi_dorsalis
ENSTNIG00000014676	rpusd4	76	53.333	ENSSPUG00000001401	RPUSD4	91	51.205	Sphenodon_punctatus
ENSTNIG00000014676	rpusd4	99	64.175	ENSSPAG00000012163	rpusd4	99	64.175	Stegastes_partitus
ENSTNIG00000014676	rpusd4	82	51.402	ENSSSCG00000015233	RPUSD4	83	51.402	Sus_scrofa
ENSTNIG00000014676	rpusd4	77	49.667	ENSTGUG00000000773	RPUSD4	99	49.667	Taeniopygia_guttata
ENSTNIG00000014676	rpusd4	99	77.778	ENSTRUG00000012283	rpusd4	99	77.778	Takifugu_rubripes
ENSTNIG00000014676	rpusd4	88	50.289	ENSTTRG00000001555	RPUSD4	90	50.289	Tursiops_truncatus
ENSTNIG00000014676	rpusd4	84	52.424	ENSUMAG00000002219	RPUSD4	86	52.424	Ursus_maritimus
ENSTNIG00000014676	rpusd4	63	46.559	ENSVPAG00000001066	RPUSD4	91	46.559	Vicugna_pacos
ENSTNIG00000014676	rpusd4	86	51.026	ENSVVUG00000020101	RPUSD4	86	51.818	Vulpes_vulpes
ENSTNIG00000014676	rpusd4	91	67.486	ENSXCOG00000004676	rpusd4	96	67.486	Xiphophorus_couchianus
ENSTNIG00000014676	rpusd4	100	64.646	ENSXMAG00000023351	rpusd4	99	64.646	Xiphophorus_maculatus