EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000014783 (Gene tree)
Gene ID: -
Gene Symbol: utp3
Alias: zgc:92127
Full Name: UTP3%2C small subunit (SSU) processome component%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3660 bases
Position: chr11:5033715-5037374
Accession: ZDB-GENE-040912-163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017821	Sas10_Utp3	PF04000.15	6.1e-17	1	1
ENSTNIP00000003729	Sas10_Utp3	PF04000.15	8.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018045	-	1398	-	ENSTNIP00000017821	465 (aa)	-	H3DBC9
ENSTNIT00000000127	-	1249	-	ENSTNIP00000003729	377 (aa)	-	H3C659

Gene Model

Click here to download ENSTNIG00000014783's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014783's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014783	utp3	96	51.467	ENSG00000132467	UTP3	93	47.186	Homo_sapiens
ENSTNIG00000014783	utp3	97	73.351	ENSAPOG00000018006	utp3	100	69.215	Acanthochromis_polyacanthus
ENSTNIG00000014783	utp3	92	55.337	ENSAMEG00000019540	UTP3	95	48.394	Ailuropoda_melanoleuca
ENSTNIG00000014783	utp3	98	68.766	ENSACIG00000010913	utp3	99	63.983	Amphilophus_citrinellus
ENSTNIG00000014783	utp3	97	73.421	ENSAOCG00000016134	utp3	100	69.697	Amphiprion_ocellaris
ENSTNIG00000014783	utp3	97	73.158	ENSAPEG00000003914	utp3	100	69.293	Amphiprion_percula
ENSTNIG00000014783	utp3	97	72.074	ENSATEG00000024940	utp3	100	69.309	Anabas_testudineus
ENSTNIG00000014783	utp3	97	54.805	ENSACAG00000012860	UTP3	95	48.052	Anolis_carolinensis
ENSTNIG00000014783	utp3	96	51.337	ENSANAG00000031723	UTP3	93	45.877	Aotus_nancymaae
ENSTNIG00000014783	utp3	97	72.414	ENSACLG00000015170	utp3	100	69.710	Astatotilapia_calliptera
ENSTNIG00000014783	utp3	97	66.313	ENSAMXG00000032941	utp3	94	67.282	Astyanax_mexicanus
ENSTNIG00000014783	utp3	94	52.055	ENSBTAG00000009310	UTP3	96	45.963	Bos_taurus
ENSTNIG00000014783	utp3	96	51.206	ENSCJAG00000042824	UTP3	93	45.319	Callithrix_jacchus
ENSTNIG00000014783	utp3	92	55.587	ENSCAFG00000002913	UTP3	93	50.109	Canis_familiaris
ENSTNIG00000014783	utp3	92	53.714	ENSCAFG00020027071	UTP3	93	48.330	Canis_lupus_dingo
ENSTNIG00000014783	utp3	94	51.515	ENSCHIG00000002276	UTP3	96	45.756	Capra_hircus
ENSTNIG00000014783	utp3	94	53.740	ENSCPOG00000005869	UTP3	93	47.468	Cavia_porcellus
ENSTNIG00000014783	utp3	96	51.752	ENSCCAG00000032341	UTP3	93	47.484	Cebus_capucinus
ENSTNIG00000014783	utp3	97	51.989	ENSCATG00000016403	UTP3	93	47.722	Cercocebus_atys
ENSTNIG00000014783	utp3	94	53.482	ENSCLAG00000017606	UTP3	95	47.588	Chinchilla_lanigera
ENSTNIG00000014783	utp3	96	51.733	ENSCSAG00000000420	UTP3	93	45.666	Chlorocebus_sabaeus
ENSTNIG00000014783	utp3	97	56.701	ENSCPBG00000019489	UTP3	94	50.000	Chrysemys_picta_bellii
ENSTNIG00000014783	utp3	96	38.889	ENSCING00000007582	-	98	36.929	Ciona_intestinalis
ENSTNIG00000014783	utp3	93	36.088	ENSCSAVG00000010608	-	95	34.529	Ciona_savignyi
ENSTNIG00000014783	utp3	96	51.733	ENSCANG00000016915	UTP3	95	46.921	Colobus_angolensis_palliatus
ENSTNIG00000014783	utp3	96	51.771	ENSCGRG00001001299	Utp3	95	48.069	Cricetulus_griseus_chok1gshd
ENSTNIG00000014783	utp3	94	52.500	ENSCGRG00000019120	Utp3	95	47.854	Cricetulus_griseus_crigri
ENSTNIG00000014783	utp3	96	59.838	ENSCSEG00000021698	utp3	93	61.765	Cynoglossus_semilaevis
ENSTNIG00000014783	utp3	97	71.733	ENSCVAG00000011971	utp3	100	68.583	Cyprinodon_variegatus
ENSTNIG00000014783	utp3	97	66.304	ENSDARG00000056720	utp3	100	61.474	Danio_rerio
ENSTNIG00000014783	utp3	92	54.749	ENSDNOG00000002962	UTP3	95	48.093	Dasypus_novemcinctus
ENSTNIG00000014783	utp3	96	52.561	ENSDORG00000023913	Utp3	93	47.903	Dipodomys_ordii
ENSTNIG00000014783	utp3	96	37.602	FBgn0029755	Sas10	86	35.938	Drosophila_melanogaster
ENSTNIG00000014783	utp3	99	37.238	ENSEBUG00000015686	utp3	99	37.370	Eptatretus_burgeri
ENSTNIG00000014783	utp3	94	53.134	ENSEASG00005016702	UTP3	94	47.854	Equus_asinus_asinus
ENSTNIG00000014783	utp3	94	53.406	ENSECAG00000005387	UTP3	93	48.246	Equus_caballus
ENSTNIG00000014783	utp3	100	61.746	ENSELUG00000001527	utp3	100	62.578	Esox_lucius
ENSTNIG00000014783	utp3	94	53.022	ENSFCAG00000007268	UTP3	94	48.387	Felis_catus
ENSTNIG00000014783	utp3	98	51.741	ENSFALG00000014560	UTP3	84	50.594	Ficedula_albicollis
ENSTNIG00000014783	utp3	97	71.768	ENSFHEG00000018565	utp3	87	68.502	Fundulus_heteroclitus
ENSTNIG00000014783	utp3	99	60.000	ENSGMOG00000001824	utp3	99	62.595	Gadus_morhua
ENSTNIG00000014783	utp3	97	52.850	ENSGALG00000047103	UTP3	74	52.405	Gallus_gallus
ENSTNIG00000014783	utp3	97	70.292	ENSGAFG00000012330	utp3	100	67.083	Gambusia_affinis
ENSTNIG00000014783	utp3	95	70.959	ENSGACG00000007417	utp3	100	68.148	Gasterosteus_aculeatus
ENSTNIG00000014783	utp3	98	55.725	ENSGAGG00000003975	UTP3	93	50.323	Gopherus_agassizii
ENSTNIG00000014783	utp3	96	52.000	ENSGGOG00000025335	UTP3	93	47.505	Gorilla_gorilla
ENSTNIG00000014783	utp3	97	72.679	ENSHBUG00000003276	utp3	100	69.502	Haplochromis_burtoni
ENSTNIG00000014783	utp3	96	51.087	ENSHGLG00000020163	UTP3	93	47.321	Heterocephalus_glaber_female
ENSTNIG00000014783	utp3	96	51.087	ENSHGLG00100020125	UTP3	93	47.321	Heterocephalus_glaber_male
ENSTNIG00000014783	utp3	97	66.053	ENSHCOG00000020540	utp3	97	61.419	Hippocampus_comes
ENSTNIG00000014783	utp3	95	66.396	ENSIPUG00000014510	Utp3	100	61.746	Ictalurus_punctatus
ENSTNIG00000014783	utp3	94	54.318	ENSSTOG00000029126	UTP3	93	49.224	Ictidomys_tridecemlineatus
ENSTNIG00000014783	utp3	96	52.877	ENSJJAG00000014891	Utp3	93	48.539	Jaculus_jaculus
ENSTNIG00000014783	utp3	97	72.513	ENSKMAG00000004879	utp3	100	67.864	Kryptolebias_marmoratus
ENSTNIG00000014783	utp3	97	72.324	ENSLBEG00000024055	utp3	100	69.309	Labrus_bergylta
ENSTNIG00000014783	utp3	99	59.553	ENSLACG00000009975	utp3	100	55.865	Latimeria_chalumnae
ENSTNIG00000014783	utp3	96	64.815	ENSLOCG00000001449	utp3	98	66.485	Lepisosteus_oculatus
ENSTNIG00000014783	utp3	96	51.613	ENSLAFG00000017017	UTP3	93	46.861	Loxodonta_africana
ENSTNIG00000014783	utp3	96	52.000	ENSMFAG00000013579	UTP3	93	45.877	Macaca_fascicularis
ENSTNIG00000014783	utp3	96	52.000	ENSMMUG00000014229	UTP3	93	45.666	Macaca_mulatta
ENSTNIG00000014783	utp3	96	52.000	ENSMNEG00000005112	UTP3	93	45.877	Macaca_nemestrina
ENSTNIG00000014783	utp3	96	52.000	ENSMLEG00000022236	UTP3	93	47.505	Mandrillus_leucophaeus
ENSTNIG00000014783	utp3	97	75.066	ENSMAMG00000015467	utp3	100	71.843	Mastacembelus_armatus
ENSTNIG00000014783	utp3	97	72.414	ENSMZEG00005014455	utp3	100	69.710	Maylandia_zebra
ENSTNIG00000014783	utp3	73	48.421	ENSMGAG00000009998	UTP3	98	41.667	Meleagris_gallopavo
ENSTNIG00000014783	utp3	92	53.541	ENSMAUG00000017935	Utp3	95	47.619	Mesocricetus_auratus
ENSTNIG00000014783	utp3	96	52.732	ENSMOCG00000005434	Utp3	95	48.802	Microtus_ochrogaster
ENSTNIG00000014783	utp3	99	72.021	ENSMMOG00000010804	utp3	99	67.797	Mola_mola
ENSTNIG00000014783	utp3	92	54.294	ENSMODG00000019084	UTP3	96	46.970	Monodelphis_domestica
ENSTNIG00000014783	utp3	97	72.966	ENSMALG00000003443	utp3	99	70.186	Monopterus_albus
ENSTNIG00000014783	utp3	94	52.646	MGP_CAROLIEiJ_G0027375	Utp3	95	47.149	Mus_caroli
ENSTNIG00000014783	utp3	96	52.055	ENSMUSG00000070697	Utp3	95	47.588	Mus_musculus
ENSTNIG00000014783	utp3	64	44.118	MGP_PahariEiJ_G0017153	-	64	45.098	Mus_pahari
ENSTNIG00000014783	utp3	96	52.055	MGP_SPRETEiJ_G0028372	Utp3	95	47.253	Mus_spretus
ENSTNIG00000014783	utp3	98	52.507	ENSMPUG00000019074	UTP3	95	47.708	Mustela_putorius_furo
ENSTNIG00000014783	utp3	92	53.672	ENSMLUG00000003722	UTP3	95	47.390	Myotis_lucifugus
ENSTNIG00000014783	utp3	94	52.222	ENSNGAG00000012521	Utp3	95	47.046	Nannospalax_galili
ENSTNIG00000014783	utp3	97	72.414	ENSNBRG00000020374	utp3	100	69.295	Neolamprologus_brichardi
ENSTNIG00000014783	utp3	96	51.872	ENSNLEG00000018563	UTP3	93	47.939	Nomascus_leucogenys
ENSTNIG00000014783	utp3	96	51.499	ENSODEG00000018723	UTP3	95	46.467	Octodon_degus
ENSTNIG00000014783	utp3	97	72.414	ENSONIG00000003918	utp3	100	69.295	Oreochromis_niloticus
ENSTNIG00000014783	utp3	75	84.000	ENSOANG00000013694	-	100	84.000	Ornithorhynchus_anatinus
ENSTNIG00000014783	utp3	94	53.444	ENSOCUG00000010003	UTP3	94	47.921	Oryctolagus_cuniculus
ENSTNIG00000014783	utp3	100	65.073	ENSORLG00000004019	utp3	100	64.898	Oryzias_latipes
ENSTNIG00000014783	utp3	100	65.281	ENSORLG00020020306	utp3	100	65.102	Oryzias_latipes_hni
ENSTNIG00000014783	utp3	99	67.506	ENSORLG00015016052	utp3	100	64.431	Oryzias_latipes_hsok
ENSTNIG00000014783	utp3	97	70.479	ENSOMEG00000022073	utp3	100	65.904	Oryzias_melastigma
ENSTNIG00000014783	utp3	94	51.913	ENSOGAG00000012878	UTP3	93	47.109	Otolemur_garnettii
ENSTNIG00000014783	utp3	94	51.791	ENSOARG00000007800	UTP3	91	47.162	Ovis_aries
ENSTNIG00000014783	utp3	96	51.467	ENSPPAG00000019684	UTP3	93	47.186	Pan_paniscus
ENSTNIG00000014783	utp3	94	54.420	ENSPPRG00000015468	UTP3	94	48.211	Panthera_pardus
ENSTNIG00000014783	utp3	94	53.591	ENSPTIG00000006703	UTP3	94	47.579	Panthera_tigris_altaica
ENSTNIG00000014783	utp3	96	52.000	ENSPANG00000008263	UTP3	93	47.505	Papio_anubis
ENSTNIG00000014783	utp3	95	64.770	ENSPKIG00000012883	utp3	100	59.677	Paramormyrops_kingsleyae
ENSTNIG00000014783	utp3	97	55.499	ENSPSIG00000000105	UTP3	67	53.140	Pelodiscus_sinensis
ENSTNIG00000014783	utp3	97	66.043	ENSPMGG00000023527	utp3	99	65.801	Periophthalmus_magnuspinnatus
ENSTNIG00000014783	utp3	94	52.646	ENSPEMG00000019223	Utp3	96	46.901	Peromyscus_maniculatus_bairdii
ENSTNIG00000014783	utp3	97	69.841	ENSPFOG00000014528	utp3	100	66.805	Poecilia_formosa
ENSTNIG00000014783	utp3	97	69.211	ENSPLAG00000005600	utp3	100	64.718	Poecilia_latipinna
ENSTNIG00000014783	utp3	97	70.106	ENSPMEG00000019359	utp3	100	65.587	Poecilia_mexicana
ENSTNIG00000014783	utp3	97	68.504	ENSPREG00000005341	utp3	100	64.113	Poecilia_reticulata
ENSTNIG00000014783	utp3	96	51.467	ENSPPYG00000014810	UTP3	93	47.403	Pongo_abelii
ENSTNIG00000014783	utp3	96	51.081	ENSPCAG00000012879	UTP3	93	46.272	Procavia_capensis
ENSTNIG00000014783	utp3	94	53.297	ENSPVAG00000004333	UTP3	94	48.276	Pteropus_vampyrus
ENSTNIG00000014783	utp3	97	66.940	ENSPNYG00000017771	utp3	99	64.693	Pundamilia_nyererei
ENSTNIG00000014783	utp3	96	65.854	ENSPNAG00000000182	utp3	100	60.915	Pygocentrus_nattereri
ENSTNIG00000014783	utp3	94	53.056	ENSRNOG00000003599	Utp3	95	47.921	Rattus_norvegicus
ENSTNIG00000014783	utp3	97	51.989	ENSRBIG00000030025	UTP3	95	47.650	Rhinopithecus_bieti
ENSTNIG00000014783	utp3	97	51.989	ENSRROG00000006709	UTP3	95	47.650	Rhinopithecus_roxellana
ENSTNIG00000014783	utp3	96	51.604	ENSSBOG00000019914	UTP3	93	45.629	Saimiri_boliviensis_boliviensis
ENSTNIG00000014783	utp3	92	55.028	ENSSHAG00000018226	UTP3	99	46.985	Sarcophilus_harrisii
ENSTNIG00000014783	utp3	96	63.686	ENSSFOG00015007775	utp3	100	59.794	Scleropages_formosus
ENSTNIG00000014783	utp3	97	75.000	ENSSMAG00000015156	utp3	100	70.468	Scophthalmus_maximus
ENSTNIG00000014783	utp3	100	70.186	ENSSDUG00000014843	utp3	100	70.325	Seriola_dumerili
ENSTNIG00000014783	utp3	97	51.908	ENSSPUG00000007404	UTP3	100	45.686	Sphenodon_punctatus
ENSTNIG00000014783	utp3	100	70.921	ENSSPAG00000007106	utp3	100	71.130	Stegastes_partitus
ENSTNIG00000014783	utp3	95	53.825	ENSSSCG00000028466	UTP3	95	49.353	Sus_scrofa
ENSTNIG00000014783	utp3	58	49.115	ENSTGUG00000001660	UTP3	99	43.706	Taeniopygia_guttata
ENSTNIG00000014783	utp3	95	82.597	ENSTRUG00000014591	utp3	100	78.914	Takifugu_rubripes
ENSTNIG00000014783	utp3	95	51.087	ENSTTRG00000008390	UTP3	93	47.566	Tursiops_truncatus
ENSTNIG00000014783	utp3	92	55.028	ENSUAMG00000008914	UTP3	95	48.017	Ursus_americanus
ENSTNIG00000014783	utp3	92	55.028	ENSUMAG00000003743	UTP3	95	48.017	Ursus_maritimus
ENSTNIG00000014783	utp3	69	47.761	ENSVVUG00000004285	UTP3	85	43.175	Vulpes_vulpes
ENSTNIG00000014783	utp3	100	56.853	ENSXETG00000026859	utp3	98	52.321	Xenopus_tropicalis
ENSTNIG00000014783	utp3	97	68.783	ENSXMAG00000017071	utp3	100	65.041	Xiphophorus_maculatus