EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000014859 (Gene tree)
Gene ID: -
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2396 bases
Position: chr15_random:1722661-1725056
Accession: ZDB-GENE-050522-555
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017901	MMR_HSR1	PF01926.23	8.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018125	-	723	-	ENSTNIP00000017901	241 (aa)	-	H3DBK8

Gene Model

Click here to download ENSTNIG00000014859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000014859	rab12	85	38.389	ENSTNIG00000016414	rab15	80	43.860
ENSTNIG00000014859	rab12	66	35.583	ENSTNIG00000016231	rab34a	63	35.583
ENSTNIG00000014859	rab12	68	35.714	ENSTNIG00000001956	RAB9A	79	35.714
ENSTNIG00000014859	rab12	74	42.222	ENSTNIG00000001260	RAB15	84	42.222
ENSTNIG00000014859	rab12	66	41.250	ENSTNIG00000002003	-	78	41.250
ENSTNIG00000014859	rab12	71	39.766	ENSTNIG00000011300	si:dkey-16l2.16	81	39.766
ENSTNIG00000014859	rab12	73	40.556	ENSTNIG00000015000	zgc:101559	86	38.863
ENSTNIG00000014859	rab12	84	35.468	ENSTNIG00000011711	rab5c	88	35.468
ENSTNIG00000014859	rab12	67	47.561	ENSTNIG00000007882	rab18b	79	47.561
ENSTNIG00000014859	rab12	83	36.946	ENSTNIG00000009039	rab14	81	38.889
ENSTNIG00000014859	rab12	66	51.250	ENSTNIG00000004511	-	98	51.250
ENSTNIG00000014859	rab12	68	32.353	ENSTNIG00000016575	rab23	79	30.108
ENSTNIG00000014859	rab12	79	38.860	ENSTNIG00000003472	rab2a	92	39.086
ENSTNIG00000014859	rab12	75	33.702	ENSTNIG00000006650	RAB19	83	33.702
ENSTNIG00000014859	rab12	84	37.264	ENSTNIG00000013182	-	76	41.818
ENSTNIG00000014859	rab12	84	36.574	ENSTNIG00000013184	-	75	41.212
ENSTNIG00000014859	rab12	69	39.881	ENSTNIG00000018498	-	74	39.881
ENSTNIG00000014859	rab12	82	32.353	ENSTNIG00000016158	rab34b	62	35.220
ENSTNIG00000014859	rab12	66	34.810	ENSTNIG00000018267	rab22a	81	34.810
ENSTNIG00000014859	rab12	84	38.208	ENSTNIG00000011081	rab11bb	75	41.818
ENSTNIG00000014859	rab12	70	39.881	ENSTNIG00000004004	-	92	39.881
ENSTNIG00000014859	rab12	84	34.286	ENSTNIG00000005090	rab25a	85	36.508
ENSTNIG00000014859	rab12	62	30.464	ENSTNIG00000012154	kras	84	30.864
ENSTNIG00000014859	rab12	66	39.752	ENSTNIG00000008784	-	99	39.752
ENSTNIG00000014859	rab12	80	33.333	ENSTNIG00000011114	-	76	37.975
ENSTNIG00000014859	rab12	64	30.128	ENSTNIG00000007566	si:ch73-116o1.2	80	30.539
ENSTNIG00000014859	rab12	77	36.946	ENSTNIG00000010125	rab33ba	84	36.946
ENSTNIG00000014859	rab12	65	38.509	ENSTNIG00000010122	rab33a	82	36.410
ENSTNIG00000014859	rab12	71	49.419	ENSTNIG00000018319	-	88	49.718
ENSTNIG00000014859	rab12	83	34.000	ENSTNIG00000015257	rab6bb	76	39.241
ENSTNIG00000014859	rab12	67	35.329	ENSTNIG00000001195	rab9a	82	35.329
ENSTNIG00000014859	rab12	68	35.583	ENSTNIG00000001448	-	97	35.583
ENSTNIG00000014859	rab12	68	30.723	ENSTNIG00000014591	rheb	89	30.723
ENSTNIG00000014859	rab12	72	36.207	ENSTNIG00000001043	si:ch211-247i17.1	84	36.207
ENSTNIG00000014859	rab12	68	42.941	ENSTNIG00000003679	-	79	42.941
ENSTNIG00000014859	rab12	66	39.130	ENSTNIG00000016831	RAB41	74	39.873
ENSTNIG00000014859	rab12	83	33.000	ENSTNIG00000009196	rab5aa	81	36.313
ENSTNIG00000014859	rab12	67	46.012	ENSTNIG00000008717	rab18a	79	46.012
ENSTNIG00000014859	rab12	80	33.333	ENSTNIG00000014604	RAB7A	76	37.975
ENSTNIG00000014859	rab12	61	37.333	ENSTNIG00000017844	-	79	37.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014859	rab12	91	83.036	ENSG00000206418	RAB12	100	82.449	Homo_sapiens
ENSTNIG00000014859	rab12	90	76.712	ENSAMEG00000007452	RAB12	99	76.923	Ailuropoda_melanoleuca
ENSTNIG00000014859	rab12	100	92.213	ENSACIG00000020616	rab12	100	94.262	Amphilophus_citrinellus
ENSTNIG00000014859	rab12	100	92.593	ENSAOCG00000002130	rab12	100	93.827	Amphiprion_ocellaris
ENSTNIG00000014859	rab12	100	92.593	ENSAPEG00000013255	rab12	100	93.827	Amphiprion_percula
ENSTNIG00000014859	rab12	100	94.215	ENSATEG00000019683	rab12	100	94.215	Anabas_testudineus
ENSTNIG00000014859	rab12	83	88.500	ENSACAG00000003360	RAB12	91	84.681	Anolis_carolinensis
ENSTNIG00000014859	rab12	100	93.416	ENSACLG00000007696	rab12	100	94.650	Astatotilapia_calliptera
ENSTNIG00000014859	rab12	100	86.585	ENSAMXG00000004882	rab12	100	87.805	Astyanax_mexicanus
ENSTNIG00000014859	rab12	93	82.743	ENSBTAG00000010356	RAB12	100	82.857	Bos_taurus
ENSTNIG00000014859	rab12	93	82.743	ENSCJAG00000015468	RAB12	72	82.449	Callithrix_jacchus
ENSTNIG00000014859	rab12	84	87.317	ENSCAFG00020023721	RAB12	84	82.449	Canis_lupus_dingo
ENSTNIG00000014859	rab12	93	82.743	ENSCHIG00000016103	RAB12	100	82.857	Capra_hircus
ENSTNIG00000014859	rab12	86	84.286	ENSCPOG00000022689	RAB12	100	88.571	Cavia_porcellus
ENSTNIG00000014859	rab12	100	79.184	ENSCCAG00000022862	RAB12	100	82.449	Cebus_capucinus
ENSTNIG00000014859	rab12	91	83.036	ENSCATG00000037784	RAB12	97	83.898	Cercocebus_atys
ENSTNIG00000014859	rab12	84	87.317	ENSCSAG00000017569	RAB12	72	81.048	Chlorocebus_sabaeus
ENSTNIG00000014859	rab12	93	80.531	ENSCPBG00000028375	RAB12	97	83.193	Chrysemys_picta_bellii
ENSTNIG00000014859	rab12	90	83.105	ENSCANG00000031453	RAB12	99	86.758	Colobus_angolensis_palliatus
ENSTNIG00000014859	rab12	93	82.743	ENSCGRG00001006958	Rab12	83	82.449	Cricetulus_griseus_chok1gshd
ENSTNIG00000014859	rab12	100	92.593	ENSCSEG00000016933	rab12	100	94.239	Cynoglossus_semilaevis
ENSTNIG00000014859	rab12	100	90.650	ENSCVAG00000003539	rab12	100	92.713	Cyprinodon_variegatus
ENSTNIG00000014859	rab12	100	85.537	ENSDARG00000089428	rab12	100	85.537	Danio_rerio
ENSTNIG00000014859	rab12	84	87.317	ENSDNOG00000046064	RAB12	54	83.966	Dasypus_novemcinctus
ENSTNIG00000014859	rab12	92	82.743	ENSDORG00000008920	Rab12	99	86.283	Dipodomys_ordii
ENSTNIG00000014859	rab12	82	62.626	ENSEBUG00000006581	rab12	95	62.626	Eptatretus_burgeri
ENSTNIG00000014859	rab12	84	87.317	ENSEASG00005002926	RAB12	83	82.449	Equus_asinus_asinus
ENSTNIG00000014859	rab12	84	87.317	ENSECAG00000007384	RAB12	71	82.449	Equus_caballus
ENSTNIG00000014859	rab12	100	88.017	ENSELUG00000007123	rab12	100	88.017	Esox_lucius
ENSTNIG00000014859	rab12	93	81.333	ENSFCAG00000027710	RAB12	72	82.449	Felis_catus
ENSTNIG00000014859	rab12	100	91.020	ENSFHEG00000004319	rab12	100	92.653	Fundulus_heteroclitus
ENSTNIG00000014859	rab12	86	89.423	ENSGMOG00000012335	rab12	87	89.423	Gadus_morhua
ENSTNIG00000014859	rab12	93	82.456	ENSGALG00000033608	RAB12	100	81.200	Gallus_gallus
ENSTNIG00000014859	rab12	97	84.255	ENSGACG00000016639	rab12	100	90.783	Gasterosteus_aculeatus
ENSTNIG00000014859	rab12	93	80.531	ENSGAGG00000007278	RAB12	97	83.193	Gopherus_agassizii
ENSTNIG00000014859	rab12	100	93.416	ENSHBUG00000008497	rab12	100	94.650	Haplochromis_burtoni
ENSTNIG00000014859	rab12	95	80.172	ENSHGLG00000006189	RAB12	91	84.052	Heterocephalus_glaber_female
ENSTNIG00000014859	rab12	100	89.712	ENSHCOG00000012376	rab12	100	89.712	Hippocampus_comes
ENSTNIG00000014859	rab12	91	92.308	ENSIPUG00000017401	rab12	100	86.885	Ictalurus_punctatus
ENSTNIG00000014859	rab12	92	81.778	ENSSTOG00000025122	RAB12	96	86.758	Ictidomys_tridecemlineatus
ENSTNIG00000014859	rab12	91	83.036	ENSJJAG00000019064	Rab12	98	86.607	Jaculus_jaculus
ENSTNIG00000014859	rab12	100	91.736	ENSKMAG00000020056	rab12	100	91.736	Kryptolebias_marmoratus
ENSTNIG00000014859	rab12	100	93.802	ENSLBEG00000013756	rab12	100	93.802	Labrus_bergylta
ENSTNIG00000014859	rab12	91	85.650	ENSLACG00000010461	RAB12	94	83.404	Latimeria_chalumnae
ENSTNIG00000014859	rab12	100	81.452	ENSLOCG00000002680	rab12	100	85.081	Lepisosteus_oculatus
ENSTNIG00000014859	rab12	91	83.036	ENSMFAG00000043551	RAB12	100	81.707	Macaca_fascicularis
ENSTNIG00000014859	rab12	84	87.317	ENSMNEG00000040853	RAB12	93	83.830	Macaca_nemestrina
ENSTNIG00000014859	rab12	100	94.628	ENSMAMG00000006862	rab12	100	94.628	Mastacembelus_armatus
ENSTNIG00000014859	rab12	100	93.416	ENSMZEG00005024316	rab12	100	94.650	Maylandia_zebra
ENSTNIG00000014859	rab12	83	83.824	ENSMGAG00000009197	RAB12	100	87.745	Meleagris_gallopavo
ENSTNIG00000014859	rab12	93	82.743	ENSMAUG00000008371	Rab12	83	82.449	Mesocricetus_auratus
ENSTNIG00000014859	rab12	91	83.036	ENSMICG00000030661	RAB12	99	83.966	Microcebus_murinus
ENSTNIG00000014859	rab12	90	83.105	ENSMOCG00000000452	Rab12	100	86.758	Microtus_ochrogaster
ENSTNIG00000014859	rab12	86	86.603	ENSMODG00000021452	RAB12	73	82.114	Monodelphis_domestica
ENSTNIG00000014859	rab12	100	91.736	ENSMALG00000015762	rab12	100	91.736	Monopterus_albus
ENSTNIG00000014859	rab12	93	83.186	MGP_CAROLIEiJ_G0021839	Rab12	84	82.857	Mus_caroli
ENSTNIG00000014859	rab12	93	83.186	ENSMUSG00000023460	Rab12	100	82.857	Mus_musculus
ENSTNIG00000014859	rab12	93	83.186	MGP_PahariEiJ_G0020826	Rab12	100	82.857	Mus_pahari
ENSTNIG00000014859	rab12	93	83.186	MGP_SPRETEiJ_G0022750	Rab12	83	82.857	Mus_spretus
ENSTNIG00000014859	rab12	100	78.776	ENSMLUG00000002883	RAB12	100	82.449	Myotis_lucifugus
ENSTNIG00000014859	rab12	91	82.589	ENSNGAG00000024103	-	96	86.161	Nannospalax_galili
ENSTNIG00000014859	rab12	91	76.786	ENSNGAG00000019722	-	100	73.878	Nannospalax_galili
ENSTNIG00000014859	rab12	100	93.416	ENSNBRG00000014428	rab12	100	94.650	Neolamprologus_brichardi
ENSTNIG00000014859	rab12	100	77.869	ENSNLEG00000006939	RAB12	100	82.449	Nomascus_leucogenys
ENSTNIG00000014859	rab12	100	78.862	ENSMEUG00000000493	RAB12	100	82.114	Notamacropus_eugenii
ENSTNIG00000014859	rab12	90	84.475	ENSODEG00000006414	RAB12	100	88.128	Octodon_degus
ENSTNIG00000014859	rab12	100	93.004	ENSONIG00000018469	rab12	100	94.239	Oreochromis_niloticus
ENSTNIG00000014859	rab12	100	94.215	ENSORLG00000003902	rab12	100	94.215	Oryzias_latipes
ENSTNIG00000014859	rab12	100	93.802	ENSORLG00020005131	rab12	100	93.802	Oryzias_latipes_hni
ENSTNIG00000014859	rab12	100	93.802	ENSORLG00015007869	rab12	100	93.802	Oryzias_latipes_hsok
ENSTNIG00000014859	rab12	100	94.215	ENSOMEG00000008191	rab12	100	94.215	Oryzias_melastigma
ENSTNIG00000014859	rab12	86	83.810	ENSOGAG00000028002	RAB12	99	87.619	Otolemur_garnettii
ENSTNIG00000014859	rab12	79	87.958	ENSOARG00000000728	RAB12	97	80.591	Ovis_aries
ENSTNIG00000014859	rab12	85	83.092	ENSPPAG00000009152	RAB12	97	87.379	Pan_paniscus
ENSTNIG00000014859	rab12	100	77.869	ENSPPRG00000024521	RAB12	100	82.449	Panthera_pardus
ENSTNIG00000014859	rab12	91	83.036	ENSPTRG00000009853	RAB12	100	82.449	Pan_troglodytes
ENSTNIG00000014859	rab12	91	83.482	ENSPANG00000009320	RAB12	100	81.781	Papio_anubis
ENSTNIG00000014859	rab12	100	87.654	ENSPKIG00000008579	rab12	100	88.066	Paramormyrops_kingsleyae
ENSTNIG00000014859	rab12	100	90.083	ENSPMGG00000001890	rab12	100	90.083	Periophthalmus_magnuspinnatus
ENSTNIG00000014859	rab12	93	83.186	ENSPEMG00000021032	Rab12	84	82.857	Peromyscus_maniculatus_bairdii
ENSTNIG00000014859	rab12	93	82.379	ENSPCIG00000010453	RAB12	61	82.114	Phascolarctos_cinereus
ENSTNIG00000014859	rab12	100	91.393	ENSPFOG00000001579	rab12	100	91.803	Poecilia_formosa
ENSTNIG00000014859	rab12	100	91.393	ENSPLAG00000013594	rab12	100	91.803	Poecilia_latipinna
ENSTNIG00000014859	rab12	100	91.393	ENSPMEG00000010417	rab12	100	91.803	Poecilia_mexicana
ENSTNIG00000014859	rab12	100	91.393	ENSPREG00000017487	rab12	100	92.213	Poecilia_reticulata
ENSTNIG00000014859	rab12	84	87.317	ENSPPYG00000009015	-	72	82.449	Pongo_abelii
ENSTNIG00000014859	rab12	100	79.184	ENSPCAG00000015007	RAB12	100	82.449	Procavia_capensis
ENSTNIG00000014859	rab12	91	83.036	ENSPCOG00000019816	RAB12	100	82.449	Propithecus_coquereli
ENSTNIG00000014859	rab12	91	82.589	ENSPVAG00000002757	RAB12	100	82.041	Pteropus_vampyrus
ENSTNIG00000014859	rab12	100	93.416	ENSPNYG00000023905	rab12	100	94.650	Pundamilia_nyererei
ENSTNIG00000014859	rab12	100	93.416	ENSPNYG00000005654	rab12	100	94.650	Pundamilia_nyererei
ENSTNIG00000014859	rab12	100	86.585	ENSPNAG00000015031	rab12	100	87.805	Pygocentrus_nattereri
ENSTNIG00000014859	rab12	93	80.617	ENSRNOG00000019295	Rab12	91	80.617	Rattus_norvegicus
ENSTNIG00000014859	rab12	91	83.036	ENSRBIG00000028760	RAB12	100	84.549	Rhinopithecus_bieti
ENSTNIG00000014859	rab12	91	83.036	ENSRROG00000019249	RAB12	94	86.607	Rhinopithecus_roxellana
ENSTNIG00000014859	rab12	93	78.855	ENSSBOG00000021125	RAB12	89	80.169	Saimiri_boliviensis_boliviensis
ENSTNIG00000014859	rab12	93	81.858	ENSSHAG00000001489	RAB12	100	81.858	Sarcophilus_harrisii
ENSTNIG00000014859	rab12	100	93.388	ENSSMAG00000012678	rab12	100	93.388	Scophthalmus_maximus
ENSTNIG00000014859	rab12	100	95.041	ENSSDUG00000008505	rab12	100	95.041	Seriola_dumerili
ENSTNIG00000014859	rab12	100	95.041	ENSSLDG00000022239	rab12	100	95.041	Seriola_lalandi_dorsalis
ENSTNIG00000014859	rab12	91	84.305	ENSSPUG00000003222	RAB12	96	85.654	Sphenodon_punctatus
ENSTNIG00000014859	rab12	100	93.004	ENSSPAG00000010822	rab12	100	94.239	Stegastes_partitus
ENSTNIG00000014859	rab12	93	81.778	ENSSSCG00000038026	RAB12	100	83.265	Sus_scrofa
ENSTNIG00000014859	rab12	93	81.385	ENSTGUG00000009889	RAB12	100	82.000	Taeniopygia_guttata
ENSTNIG00000014859	rab12	100	94.215	ENSTRUG00000024455	rab12	100	94.215	Takifugu_rubripes
ENSTNIG00000014859	rab12	90	83.105	ENSTTRG00000008711	RAB12	99	86.758	Tursiops_truncatus
ENSTNIG00000014859	rab12	91	83.036	ENSUAMG00000018092	RAB12	100	82.449	Ursus_americanus
ENSTNIG00000014859	rab12	90	82.353	ENSVVUG00000011748	RAB12	99	85.973	Vulpes_vulpes
ENSTNIG00000014859	rab12	90	84.475	ENSXETG00000004289	rab12	75	84.874	Xenopus_tropicalis
ENSTNIG00000014859	rab12	100	90.984	ENSXCOG00000019310	rab12	100	91.803	Xiphophorus_couchianus
ENSTNIG00000014859	rab12	100	91.393	ENSXMAG00000023617	rab12	100	92.213	Xiphophorus_maculatus