EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000014930 (Gene tree)
Gene ID: -
Gene Symbol: setd1a
Alias: -
Full Name: SET domain containing 1A
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 10519 bases
Position: chr3:14138032-14148550
Accession: ZDB-GENE-080521-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000017976	RRM_1	PF00076.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018200	-	4926	-	ENSTNIP00000017976	1641 (aa)	-	H3DBT3

Gene Model

Click here to download ENSTNIG00000014930's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000014930's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000014930	setd1a	61	65.723	ENSTNIG00000009090	setd1ba	55	66.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000014930	setd1a	76	93.532	ENSAPOG00000018002	setd1a	66	93.532	Acanthochromis_polyacanthus
ENSTNIG00000014930	setd1a	93	71.529	ENSACIG00000007144	setd1a	87	76.860	Amphilophus_citrinellus
ENSTNIG00000014930	setd1a	90	90.426	ENSAOCG00000003663	setd1a	83	90.160	Amphiprion_ocellaris
ENSTNIG00000014930	setd1a	86	80.342	ENSATEG00000022798	setd1a	84	80.627	Anabas_testudineus
ENSTNIG00000014930	setd1a	86	78.105	ENSACAG00000007606	-	56	78.105	Anolis_carolinensis
ENSTNIG00000014930	setd1a	89	94.737	ENSACLG00000024747	setd1a	50	89.096	Astatotilapia_calliptera
ENSTNIG00000014930	setd1a	71	75.415	ENSAMXG00000009497	setd1a	71	89.583	Astyanax_mexicanus
ENSTNIG00000014930	setd1a	78	89.722	ENSCSEG00000021605	setd1a	79	93.082	Cynoglossus_semilaevis
ENSTNIG00000014930	setd1a	83	77.208	ENSCVAG00000011672	setd1a	82	87.766	Cyprinodon_variegatus
ENSTNIG00000014930	setd1a	87	76.238	ENSDARG00000060030	setd1a	68	88.000	Danio_rerio
ENSTNIG00000014930	setd1a	52	68.644	ENSELUG00000020261	setd1a	76	84.545	Esox_lucius
ENSTNIG00000014930	setd1a	91	74.000	ENSFHEG00000023258	setd1a	83	96.257	Fundulus_heteroclitus
ENSTNIG00000014930	setd1a	73	88.889	ENSGAFG00000011698	setd1a	68	88.889	Gambusia_affinis
ENSTNIG00000014930	setd1a	81	63.230	ENSGAGG00000010781	-	82	80.405	Gopherus_agassizii
ENSTNIG00000014930	setd1a	90	83.077	ENSHBUG00000008893	setd1a	50	89.894	Haplochromis_burtoni
ENSTNIG00000014930	setd1a	86	74.922	ENSHCOG00000003119	setd1a	92	75.394	Hippocampus_comes
ENSTNIG00000014930	setd1a	78	76.271	ENSIPUG00000007413	setd1a	68	88.176	Ictalurus_punctatus
ENSTNIG00000014930	setd1a	85	80.263	ENSKMAG00000009484	setd1a	79	89.362	Kryptolebias_marmoratus
ENSTNIG00000014930	setd1a	90	89.096	ENSLBEG00000004399	setd1a	79	93.711	Labrus_bergylta
ENSTNIG00000014930	setd1a	76	89.883	ENSMAMG00000021851	setd1a	88	89.494	Mastacembelus_armatus
ENSTNIG00000014930	setd1a	89	94.737	ENSMZEG00005023141	setd1a	50	89.096	Maylandia_zebra
ENSTNIG00000014930	setd1a	52	58.824	ENSMAUG00000008959	-	50	60.177	Mesocricetus_auratus
ENSTNIG00000014930	setd1a	55	94.737	ENSMMOG00000016992	setd1a	62	84.459	Mola_mola
ENSTNIG00000014930	setd1a	87	84.324	ENSMALG00000007401	setd1a	76	90.064	Monopterus_albus
ENSTNIG00000014930	setd1a	53	77.961	ENSMLUG00000027303	-	56	63.318	Myotis_lucifugus
ENSTNIG00000014930	setd1a	90	81.471	ENSNBRG00000004760	setd1a	79	87.500	Neolamprologus_brichardi
ENSTNIG00000014930	setd1a	63	64.983	ENSONIG00000009854	setd1a	74	92.157	Oreochromis_niloticus
ENSTNIG00000014930	setd1a	53	88.462	ENSOCUG00000022182	-	55	57.057	Oryctolagus_cuniculus
ENSTNIG00000014930	setd1a	90	75.645	ENSORLG00000002213	setd1a	78	88.298	Oryzias_latipes
ENSTNIG00000014930	setd1a	90	75.931	ENSORLG00020011897	setd1a	81	88.298	Oryzias_latipes_hni
ENSTNIG00000014930	setd1a	90	75.358	ENSORLG00015004826	setd1a	78	88.564	Oryzias_latipes_hsok
ENSTNIG00000014930	setd1a	78	94.444	ENSOMEG00000019732	setd1a	80	88.830	Oryzias_melastigma
ENSTNIG00000014930	setd1a	84	76.420	ENSPFOG00000013669	setd1a	80	88.830	Poecilia_formosa
ENSTNIG00000014930	setd1a	85	76.638	ENSPLAG00000009294	setd1a	78	88.830	Poecilia_latipinna
ENSTNIG00000014930	setd1a	81	75.852	ENSPREG00000010201	setd1a	78	89.628	Poecilia_reticulata
ENSTNIG00000014930	setd1a	90	83.077	ENSPNYG00000014139	setd1a	50	89.362	Pundamilia_nyererei
ENSTNIG00000014930	setd1a	56	86.275	ENSPNAG00000019165	setd1a	71	87.755	Pygocentrus_nattereri
ENSTNIG00000014930	setd1a	78	72.775	ENSSFOG00015007013	setd1a	68	91.111	Scleropages_formosus
ENSTNIG00000014930	setd1a	60	97.727	ENSSMAG00000008846	setd1a	79	93.082	Scophthalmus_maximus
ENSTNIG00000014930	setd1a	77	94.737	ENSSDUG00000022142	setd1a	82	90.591	Seriola_dumerili
ENSTNIG00000014930	setd1a	74	94.737	ENSSLDG00000018250	setd1a	82	90.591	Seriola_lalandi_dorsalis
ENSTNIG00000014930	setd1a	64	71.134	ENSSARG00000005591	-	72	58.091	Sorex_araneus
ENSTNIG00000014930	setd1a	79	90.691	ENSSPAG00000007822	setd1a	81	90.426	Stegastes_partitus
ENSTNIG00000014930	setd1a	86	89.333	ENSTRUG00000008953	setd1a	64	87.572	Takifugu_rubripes
ENSTNIG00000014930	setd1a	63	68.790	ENSUMAG00000013935	-	64	76.866	Ursus_maritimus
ENSTNIG00000014930	setd1a	60	54.335	ENSXETG00000001921	setd1a	65	53.822	Xenopus_tropicalis
ENSTNIG00000014930	setd1a	83	77.713	ENSXCOG00000017585	setd1a	66	86.243	Xiphophorus_couchianus
ENSTNIG00000014930	setd1a	85	75.783	ENSXMAG00000008021	setd1a	83	89.096	Xiphophorus_maculatus