EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000015000 (Gene tree)
Gene ID: -
Gene Symbol: zgc:101559
Alias: -
Full Name: zgc:101559
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1384 bases
Position: chr2:10582421-10583804
Accession: ZDB-GENE-041114-122
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000018049	MMR_HSR1	PF01926.23	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018273	-	1101	-	ENSTNIP00000018049	236 (aa)	-	H3DC06

Gene Model

Click here to download ENSTNIG00000015000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000015000	zgc:101559	62	38.667	ENSTNIG00000001195	rab9a	74	38.667
ENSTNIG00000015000	zgc:101559	62	36.735	ENSTNIG00000008784	-	90	36.735
ENSTNIG00000015000	zgc:101559	72	55.429	ENSTNIG00000012343	-	82	52.062
ENSTNIG00000015000	zgc:101559	62	40.667	ENSTNIG00000016831	RAB41	69	40.667
ENSTNIG00000015000	zgc:101559	62	44.595	ENSTNIG00000001260	RAB15	69	44.595
ENSTNIG00000015000	zgc:101559	69	30.539	ENSTNIG00000006596	dnajc27	61	30.539
ENSTNIG00000015000	zgc:101559	74	46.023	ENSTNIG00000018498	-	76	46.023
ENSTNIG00000015000	zgc:101559	71	45.562	ENSTNIG00000006650	RAB19	81	43.094
ENSTNIG00000015000	zgc:101559	64	35.948	ENSTNIG00000014591	rheb	82	35.948
ENSTNIG00000015000	zgc:101559	56	43.609	ENSTNIG00000016158	rab34b	51	43.609
ENSTNIG00000015000	zgc:101559	76	40.223	ENSTNIG00000013184	-	81	40.223
ENSTNIG00000015000	zgc:101559	77	39.779	ENSTNIG00000013182	-	83	39.779
ENSTNIG00000015000	zgc:101559	53	32.540	ENSTNIG00000006917	si:cabz01085950.1	95	32.540
ENSTNIG00000015000	zgc:101559	78	37.949	ENSTNIG00000007882	rab18b	92	37.949
ENSTNIG00000015000	zgc:101559	72	39.766	ENSTNIG00000011711	rab5c	75	39.766
ENSTNIG00000015000	zgc:101559	77	39.779	ENSTNIG00000011081	rab11bb	82	39.779
ENSTNIG00000015000	zgc:101559	73	35.260	ENSTNIG00000007566	si:ch73-116o1.2	81	35.260
ENSTNIG00000015000	zgc:101559	63	49.664	ENSTNIG00000004511	-	91	49.664
ENSTNIG00000015000	zgc:101559	72	40.588	ENSTNIG00000002003	-	83	40.588
ENSTNIG00000015000	zgc:101559	62	44.218	ENSTNIG00000016414	rab15	68	44.218
ENSTNIG00000015000	zgc:101559	68	30.488	ENSTNIG00000017844	-	76	33.103
ENSTNIG00000015000	zgc:101559	62	40.816	ENSTNIG00000015257	rab6bb	70	40.816
ENSTNIG00000015000	zgc:101559	76	41.667	ENSTNIG00000011300	si:dkey-16l2.16	85	41.111
ENSTNIG00000015000	zgc:101559	72	40.936	ENSTNIG00000009196	rab5aa	77	40.936
ENSTNIG00000015000	zgc:101559	69	38.462	ENSTNIG00000011114	-	79	38.462
ENSTNIG00000015000	zgc:101559	84	33.838	ENSTNIG00000011385	hrasb	97	33.838
ENSTNIG00000015000	zgc:101559	71	31.138	ENSTNIG00000013137	ran	74	31.138
ENSTNIG00000015000	zgc:101559	65	45.513	ENSTNIG00000003679	-	73	45.513
ENSTNIG00000015000	zgc:101559	86	38.863	ENSTNIG00000014859	rab12	73	40.556
ENSTNIG00000015000	zgc:101559	62	38.776	ENSTNIG00000001448	-	86	38.776
ENSTNIG00000015000	zgc:101559	69	38.462	ENSTNIG00000014604	RAB7A	79	38.462
ENSTNIG00000015000	zgc:101559	63	44.595	ENSTNIG00000008717	rab18a	71	44.595
ENSTNIG00000015000	zgc:101559	67	34.783	ENSTNIG00000001956	RAB9A	76	34.783
ENSTNIG00000015000	zgc:101559	70	36.257	ENSTNIG00000005090	rab25a	79	35.795
ENSTNIG00000015000	zgc:101559	67	30.994	ENSTNIG00000003649	rasl11a	71	30.994
ENSTNIG00000015000	zgc:101559	64	37.086	ENSTNIG00000016575	rab23	67	37.423
ENSTNIG00000015000	zgc:101559	68	40.625	ENSTNIG00000004004	-	86	40.625
ENSTNIG00000015000	zgc:101559	71	40.476	ENSTNIG00000009039	rab14	74	40.476
ENSTNIG00000015000	zgc:101559	70	43.636	ENSTNIG00000018319	-	80	43.636
ENSTNIG00000015000	zgc:101559	86	53.922	ENSTNIG00000010122	rab33a	88	53.922
ENSTNIG00000015000	zgc:101559	88	57.339	ENSTNIG00000010125	rab33ba	80	61.780
ENSTNIG00000015000	zgc:101559	69	40.491	ENSTNIG00000003472	rab2a	77	40.476
ENSTNIG00000015000	zgc:101559	70	37.870	ENSTNIG00000018267	rab22a	83	37.870
ENSTNIG00000015000	zgc:101559	67	31.481	ENSTNIG00000017951	rabl2	68	31.481
ENSTNIG00000015000	zgc:101559	66	39.103	ENSTNIG00000001043	si:ch211-247i17.1	77	39.103
ENSTNIG00000015000	zgc:101559	70	32.934	ENSTNIG00000009798	nkiras1	85	32.934
ENSTNIG00000015000	zgc:101559	78	34.783	ENSTNIG00000012154	kras	93	34.783

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015000	zgc:101559	97	76.957	ENSAPOG00000007503	zgc:101559	93	80.645	Acanthochromis_polyacanthus
ENSTNIG00000015000	zgc:101559	86	84.158	ENSACIG00000021459	zgc:101559	89	84.158	Amphilophus_citrinellus
ENSTNIG00000015000	zgc:101559	92	81.106	ENSAOCG00000024675	zgc:101559	93	81.106	Amphiprion_ocellaris
ENSTNIG00000015000	zgc:101559	92	81.106	ENSAPEG00000005176	zgc:101559	93	81.106	Amphiprion_percula
ENSTNIG00000015000	zgc:101559	93	80.365	ENSATEG00000007761	zgc:101559	93	80.734	Anabas_testudineus
ENSTNIG00000015000	zgc:101559	91	81.481	ENSACLG00000027006	zgc:101559	92	81.481	Astatotilapia_calliptera
ENSTNIG00000015000	zgc:101559	89	74.762	ENSAMXG00000040460	zgc:101559	86	74.762	Astyanax_mexicanus
ENSTNIG00000015000	zgc:101559	100	75.000	ENSCSEG00000006243	zgc:101559	93	78.802	Cynoglossus_semilaevis
ENSTNIG00000015000	zgc:101559	93	79.909	ENSCVAG00000019227	zgc:101559	93	80.275	Cyprinodon_variegatus
ENSTNIG00000015000	zgc:101559	97	71.930	ENSDARG00000003257	zgc:101559	92	75.349	Danio_rerio
ENSTNIG00000015000	zgc:101559	92	77.523	ENSFHEG00000011483	zgc:101559	93	77.523	Fundulus_heteroclitus
ENSTNIG00000015000	zgc:101559	83	79.082	ENSGMOG00000011665	zgc:101559	90	81.579	Gadus_morhua
ENSTNIG00000015000	zgc:101559	93	78.539	ENSGAFG00000021202	zgc:101559	93	78.899	Gambusia_affinis
ENSTNIG00000015000	zgc:101559	83	78.680	ENSGACG00000001725	zgc:101559	83	79.793	Gasterosteus_aculeatus
ENSTNIG00000015000	zgc:101559	92	82.028	ENSHBUG00000007827	zgc:101559	93	82.028	Haplochromis_burtoni
ENSTNIG00000015000	zgc:101559	89	76.555	ENSHCOG00000009133	zgc:101559	92	76.147	Hippocampus_comes
ENSTNIG00000015000	zgc:101559	87	73.786	ENSIPUG00000022394	zgc:101559	91	72.170	Ictalurus_punctatus
ENSTNIG00000015000	zgc:101559	100	77.637	ENSKMAG00000002862	zgc:101559	100	77.637	Kryptolebias_marmoratus
ENSTNIG00000015000	zgc:101559	93	81.279	ENSLBEG00000025798	zgc:101559	92	82.326	Labrus_bergylta
ENSTNIG00000015000	zgc:101559	84	65.829	ENSLACG00000011557	zgc:101559	86	65.829	Latimeria_chalumnae
ENSTNIG00000015000	zgc:101559	81	75.789	ENSLOCG00000005904	zgc:101559	81	75.789	Lepisosteus_oculatus
ENSTNIG00000015000	zgc:101559	98	77.489	ENSMAMG00000017431	zgc:101559	93	81.651	Mastacembelus_armatus
ENSTNIG00000015000	zgc:101559	92	82.028	ENSMZEG00005021778	zgc:101559	93	82.028	Maylandia_zebra
ENSTNIG00000015000	zgc:101559	97	81.304	ENSMMOG00000019779	zgc:101559	93	84.793	Mola_mola
ENSTNIG00000015000	zgc:101559	92	78.802	ENSMALG00000003712	zgc:101559	93	78.802	Monopterus_albus
ENSTNIG00000015000	zgc:101559	92	81.567	ENSNBRG00000002684	zgc:101559	93	81.567	Neolamprologus_brichardi
ENSTNIG00000015000	zgc:101559	92	82.028	ENSONIG00000006715	-	93	82.028	Oreochromis_niloticus
ENSTNIG00000015000	zgc:101559	100	74.576	ENSORLG00000030642	zgc:101559	93	78.899	Oryzias_latipes
ENSTNIG00000015000	zgc:101559	100	74.153	ENSORLG00020012685	zgc:101559	93	78.440	Oryzias_latipes_hni
ENSTNIG00000015000	zgc:101559	100	75.000	ENSORLG00015016047	zgc:101559	93	79.358	Oryzias_latipes_hsok
ENSTNIG00000015000	zgc:101559	100	75.847	ENSOMEG00000013128	zgc:101559	93	80.734	Oryzias_melastigma
ENSTNIG00000015000	zgc:101559	87	72.683	ENSPKIG00000013397	zgc:101559	86	72.683	Paramormyrops_kingsleyae
ENSTNIG00000015000	zgc:101559	93	81.279	ENSPFOG00000009101	-	93	81.651	Poecilia_formosa
ENSTNIG00000015000	zgc:101559	93	81.279	ENSPLAG00000020627	zgc:101559	93	81.651	Poecilia_latipinna
ENSTNIG00000015000	zgc:101559	93	80.365	ENSPMEG00000010152	zgc:101559	93	80.734	Poecilia_mexicana
ENSTNIG00000015000	zgc:101559	93	79.452	ENSPREG00000007017	zgc:101559	93	79.817	Poecilia_reticulata
ENSTNIG00000015000	zgc:101559	92	82.028	ENSPNYG00000012922	zgc:101559	93	82.028	Pundamilia_nyererei
ENSTNIG00000015000	zgc:101559	89	75.238	ENSPNAG00000017856	zgc:101559	91	75.238	Pygocentrus_nattereri
ENSTNIG00000015000	zgc:101559	88	72.464	ENSSFOG00015006175	zgc:101559	89	72.464	Scleropages_formosus
ENSTNIG00000015000	zgc:101559	93	80.000	ENSSMAG00000002229	zgc:101559	92	80.275	Scophthalmus_maximus
ENSTNIG00000015000	zgc:101559	92	83.410	ENSSDUG00000008151	zgc:101559	93	83.410	Seriola_dumerili
ENSTNIG00000015000	zgc:101559	92	83.410	ENSSLDG00000019214	zgc:101559	93	83.410	Seriola_lalandi_dorsalis
ENSTNIG00000015000	zgc:101559	92	81.567	ENSSPAG00000006404	zgc:101559	93	81.567	Stegastes_partitus
ENSTNIG00000015000	zgc:101559	95	87.556	ENSTRUG00000009903	zgc:101559	93	89.450	Takifugu_rubripes
ENSTNIG00000015000	zgc:101559	93	78.995	ENSXCOG00000018683	zgc:101559	93	79.358	Xiphophorus_couchianus
ENSTNIG00000015000	zgc:101559	93	79.452	ENSXMAG00000011171	zgc:101559	93	79.817	Xiphophorus_maculatus