EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000015242 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 579 bases
Position: chr15:6151077-6151655
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000018300	MMR_HSR1	PF01926.23	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018525	-	579	-	ENSTNIP00000018300	193 (aa)	-	H3DCQ7

Gene Model

Click here to download ENSTNIG00000015242's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015242's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000015242	-	84	40.000	ENSTNIG00000000601	arl4aa	82	39.024
ENSTNIG00000015242	-	90	36.207	ENSTNIG00000009030	-	92	36.207
ENSTNIG00000015242	-	88	42.604	ENSTNIG00000011685	-	91	42.604
ENSTNIG00000015242	-	83	42.500	ENSTNIG00000006920	arl1	85	42.500
ENSTNIG00000015242	-	60	40.000	ENSTNIG00000005278	arfrp1	86	40.000
ENSTNIG00000015242	-	82	34.568	ENSTNIG00000009430	ARL6	85	34.568
ENSTNIG00000015242	-	88	41.243	ENSTNIG00000017954	-	91	41.243
ENSTNIG00000015242	-	82	42.405	ENSTNIG00000013830	arl2	90	41.176
ENSTNIG00000015242	-	83	44.099	ENSTNIG00000003348	arf5	87	44.099
ENSTNIG00000015242	-	88	43.195	ENSTNIG00000002029	arf2b	91	43.195
ENSTNIG00000015242	-	72	46.377	ENSTNIG00000000796	-	59	46.377
ENSTNIG00000015242	-	85	31.250	ENSTNIG00000016097	sar1b	87	31.250
ENSTNIG00000015242	-	83	39.752	ENSTNIG00000000814	arl5a	86	39.752
ENSTNIG00000015242	-	87	36.310	ENSTNIG00000014233	arl3l2	87	36.310
ENSTNIG00000015242	-	72	32.639	ENSTNIG00000007336	arl8bb	75	32.639
ENSTNIG00000015242	-	63	35.246	ENSTNIG00000008635	sar1ab	60	35.246
ENSTNIG00000015242	-	91	47.727	ENSTNIG00000010605	arl11	94	47.727
ENSTNIG00000015242	-	68	44.361	ENSTNIG00000018302	-	61	43.836
ENSTNIG00000015242	-	82	43.396	ENSTNIG00000019582	arf6b	88	43.396
ENSTNIG00000015242	-	72	32.639	ENSTNIG00000014751	arl8ba	75	32.639
ENSTNIG00000015242	-	89	37.427	ENSTNIG00000005852	arl8	91	37.647
ENSTNIG00000015242	-	68	47.727	ENSTNIG00000001632	-	61	46.897
ENSTNIG00000015242	-	82	38.994	ENSTNIG00000004344	arl3	85	38.994
ENSTNIG00000015242	-	85	32.973	ENSTNIG00000004395	ARL6	86	32.973
ENSTNIG00000015242	-	88	43.787	ENSTNIG00000014595	arf3b	91	43.787
ENSTNIG00000015242	-	79	43.791	ENSTNIG00000003015	arl5c	82	43.791
ENSTNIG00000015242	-	84	43.636	ENSTNIG00000003426	-	82	43.636
ENSTNIG00000015242	-	88	43.195	ENSTNIG00000015063	-	91	43.195

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015242	-	95	69.312	ENSACIG00000013244	arl14	92	69.312	Amphilophus_citrinellus
ENSTNIG00000015242	-	95	69.892	ENSACLG00000026984	arl14	92	69.892	Astatotilapia_calliptera
ENSTNIG00000015242	-	92	58.101	ENSACLG00000015415	-	86	58.101	Astatotilapia_calliptera
ENSTNIG00000015242	-	92	53.073	ENSCSEG00000017926	-	86	53.073	Cynoglossus_semilaevis
ENSTNIG00000015242	-	95	61.622	ENSDARG00000063223	arl14	92	61.622	Danio_rerio
ENSTNIG00000015242	-	93	53.591	ENSELUG00000024060	-	63	53.591	Esox_lucius
ENSTNIG00000015242	-	95	70.811	ENSFHEG00000018721	arl14	92	70.811	Fundulus_heteroclitus
ENSTNIG00000015242	-	87	67.262	ENSGMOG00000020214	arl14	100	67.262	Gadus_morhua
ENSTNIG00000015242	-	92	57.542	ENSGAFG00000012819	-	90	57.542	Gambusia_affinis
ENSTNIG00000015242	-	92	53.631	ENSGACG00000010096	-	97	53.631	Gasterosteus_aculeatus
ENSTNIG00000015242	-	88	74.118	ENSGACG00000013840	arl14	93	74.118	Gasterosteus_aculeatus
ENSTNIG00000015242	-	95	69.892	ENSHBUG00000001159	arl14	92	69.892	Haplochromis_burtoni
ENSTNIG00000015242	-	94	70.166	ENSHCOG00000009562	arl14	86	70.166	Hippocampus_comes
ENSTNIG00000015242	-	94	71.038	ENSKMAG00000010409	arl14	91	71.038	Kryptolebias_marmoratus
ENSTNIG00000015242	-	92	54.749	ENSKMAG00000020389	-	86	54.749	Kryptolebias_marmoratus
ENSTNIG00000015242	-	95	78.261	ENSLBEG00000021116	arl14	86	78.261	Labrus_bergylta
ENSTNIG00000015242	-	95	76.087	ENSMAMG00000011773	arl14	92	76.087	Mastacembelus_armatus
ENSTNIG00000015242	-	92	56.425	ENSMAMG00000012474	-	86	56.425	Mastacembelus_armatus
ENSTNIG00000015242	-	95	69.892	ENSMZEG00005025506	arl14	92	69.892	Maylandia_zebra
ENSTNIG00000015242	-	92	58.101	ENSMZEG00005000218	-	86	58.101	Maylandia_zebra
ENSTNIG00000015242	-	92	57.542	ENSONIG00000003641	-	75	57.542	Oreochromis_niloticus
ENSTNIG00000015242	-	95	70.109	ENSONIG00000009954	arl14	88	70.109	Oreochromis_niloticus
ENSTNIG00000015242	-	93	70.556	ENSORLG00000027330	arl14	97	70.556	Oryzias_latipes
ENSTNIG00000015242	-	93	70.556	ENSORLG00020014120	arl14	97	70.556	Oryzias_latipes_hni
ENSTNIG00000015242	-	93	70.556	ENSORLG00015014176	arl14	97	70.556	Oryzias_latipes_hsok
ENSTNIG00000015242	-	84	69.753	ENSOMEG00000016904	arl14	89	69.753	Oryzias_melastigma
ENSTNIG00000015242	-	92	55.866	ENSPFOG00000012216	-	83	55.866	Poecilia_formosa
ENSTNIG00000015242	-	95	70.652	ENSPFOG00000020069	arl14	92	70.652	Poecilia_formosa
ENSTNIG00000015242	-	87	72.024	ENSPLAG00000017362	arl14	96	72.024	Poecilia_latipinna
ENSTNIG00000015242	-	92	55.866	ENSPMEG00000008427	-	86	55.866	Poecilia_mexicana
ENSTNIG00000015242	-	92	56.983	ENSPREG00000001895	-	86	56.983	Poecilia_reticulata
ENSTNIG00000015242	-	95	69.565	ENSPREG00000001976	arl14	91	69.565	Poecilia_reticulata
ENSTNIG00000015242	-	92	58.101	ENSPNYG00000006844	-	92	58.101	Pundamilia_nyererei
ENSTNIG00000015242	-	92	54.749	ENSSMAG00000012843	-	86	54.749	Scophthalmus_maximus
ENSTNIG00000015242	-	59	56.140	ENSSDUG00000023723	-	100	56.140	Seriola_dumerili
ENSTNIG00000015242	-	92	55.307	ENSSLDG00000006512	-	86	55.307	Seriola_lalandi_dorsalis
ENSTNIG00000015242	-	95	79.348	ENSSPAG00000014539	arl14	90	79.348	Stegastes_partitus
ENSTNIG00000015242	-	92	58.101	ENSSPAG00000014422	-	86	58.101	Stegastes_partitus
ENSTNIG00000015242	-	92	57.542	ENSXMAG00000021386	-	86	57.542	Xiphophorus_maculatus