EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000015350 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2204 bases
Position: chr12:3740291-3742494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002444	RRM_1	PF00076.22	5e-22	1	2
ENSTNIP00000002444	RRM_1	PF00076.22	5e-22	2	2
ENSTNIP00000018414	RRM_1	PF00076.22	5.6e-21	1	2
ENSTNIP00000018414	RRM_1	PF00076.22	5.6e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018640	-	909	-	ENSTNIP00000018414	303 (aa)	-	H3DD21
ENSTNIT00000002400	-	996	-	ENSTNIP00000002444	331 (aa)	-	H3C2H6

Gene Model

Click here to download ENSTNIG00000015350's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015350's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000015350	-	97	46.667	ENSTNIG00000013788	hnrnph3	73	54.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015350	-	99	62.179	ENSAPOG00000012487	grsf1	78	61.218	Acanthochromis_polyacanthus
ENSTNIG00000015350	-	96	66.894	ENSACIG00000005871	grsf1	81	66.327	Amphilophus_citrinellus
ENSTNIG00000015350	-	99	62.739	ENSAOCG00000017462	-	78	61.981	Amphiprion_ocellaris
ENSTNIG00000015350	-	99	61.587	ENSAPEG00000007240	-	78	61.465	Amphiprion_percula
ENSTNIG00000015350	-	97	61.513	ENSATEG00000007185	grsf1	80	60.535	Anabas_testudineus
ENSTNIG00000015350	-	100	63.636	ENSACLG00000003685	-	83	62.696	Astatotilapia_calliptera
ENSTNIG00000015350	-	97	48.621	ENSAMXG00000012270	grsf1	98	46.154	Astyanax_mexicanus
ENSTNIG00000015350	-	95	67.000	ENSCSEG00000019209	-	81	67.000	Cynoglossus_semilaevis
ENSTNIG00000015350	-	99	59.804	ENSCVAG00000004476	grsf1	81	59.804	Cyprinodon_variegatus
ENSTNIG00000015350	-	99	50.000	ENSDARG00000053021	grsf1	78	49.675	Danio_rerio
ENSTNIG00000015350	-	99	46.749	ENSFHEG00000013358	-	86	46.130	Fundulus_heteroclitus
ENSTNIG00000015350	-	97	70.909	ENSGMOG00000014047	grsf1	78	70.909	Gadus_morhua
ENSTNIG00000015350	-	99	56.646	ENSGAFG00000004496	grsf1	82	56.646	Gambusia_affinis
ENSTNIG00000015350	-	99	52.941	ENSGACG00000014447	grsf1	98	55.738	Gasterosteus_aculeatus
ENSTNIG00000015350	-	100	63.522	ENSHBUG00000006284	grsf1	80	62.893	Haplochromis_burtoni
ENSTNIG00000015350	-	100	55.449	ENSHCOG00000007715	-	84	55.591	Hippocampus_comes
ENSTNIG00000015350	-	95	54.762	ENSIPUG00000010533	grsf1	79	54.762	Ictalurus_punctatus
ENSTNIG00000015350	-	99	56.563	ENSKMAG00000004528	grsf1	80	56.250	Kryptolebias_marmoratus
ENSTNIG00000015350	-	98	46.688	ENSLBEG00000018100	grsf1	91	50.694	Labrus_bergylta
ENSTNIG00000015350	-	100	63.125	ENSMAMG00000002627	grsf1	84	61.562	Mastacembelus_armatus
ENSTNIG00000015350	-	100	62.382	ENSMZEG00005020633	-	83	62.382	Maylandia_zebra
ENSTNIG00000015350	-	97	69.388	ENSMMOG00000014231	grsf1	90	64.465	Mola_mola
ENSTNIG00000015350	-	97	63.578	ENSMALG00000000251	grsf1	82	63.259	Monopterus_albus
ENSTNIG00000015350	-	100	63.009	ENSNBRG00000017774	grsf1	78	63.009	Neolamprologus_brichardi
ENSTNIG00000015350	-	97	65.158	ENSONIG00000014119	grsf1	84	73.333	Oreochromis_niloticus
ENSTNIG00000015350	-	96	60.535	ENSORLG00000030211	grsf1	81	59.406	Oryzias_latipes
ENSTNIG00000015350	-	96	60.943	ENSORLG00020014383	grsf1	81	60.133	Oryzias_latipes_hni
ENSTNIG00000015350	-	96	60.201	ENSORLG00015006520	grsf1	81	59.406	Oryzias_latipes_hsok
ENSTNIG00000015350	-	97	60.797	ENSOMEG00000009181	grsf1	85	60.984	Oryzias_melastigma
ENSTNIG00000015350	-	96	51.333	ENSPKIG00000019432	grsf1	73	51.333	Paramormyrops_kingsleyae
ENSTNIG00000015350	-	100	56.196	ENSPMGG00000013654	grsf1	92	58.917	Periophthalmus_magnuspinnatus
ENSTNIG00000015350	-	99	57.099	ENSPFOG00000006122	grsf1	82	56.966	Poecilia_formosa
ENSTNIG00000015350	-	99	57.812	ENSPLAG00000020977	grsf1	82	57.812	Poecilia_latipinna
ENSTNIG00000015350	-	99	56.481	ENSPMEG00000012485	grsf1	82	56.173	Poecilia_mexicana
ENSTNIG00000015350	-	99	56.211	ENSPREG00000013383	grsf1	82	56.211	Poecilia_reticulata
ENSTNIG00000015350	-	100	63.810	ENSPNYG00000005379	grsf1	80	63.492	Pundamilia_nyererei
ENSTNIG00000015350	-	95	56.803	ENSPNAG00000014912	grsf1	72	56.803	Pygocentrus_nattereri
ENSTNIG00000015350	-	94	44.898	ENSSFOG00015014620	grsf1	77	44.898	Scleropages_formosus
ENSTNIG00000015350	-	95	60.606	ENSSMAG00000014181	grsf1	70	60.606	Scophthalmus_maximus
ENSTNIG00000015350	-	97	67.797	ENSSDUG00000009397	-	94	66.102	Seriola_dumerili
ENSTNIG00000015350	-	97	66.667	ENSSLDG00000025494	grsf1	94	62.626	Seriola_lalandi_dorsalis
ENSTNIG00000015350	-	100	56.869	ENSSPAG00000023296	grsf1	79	55.911	Stegastes_partitus
ENSTNIG00000015350	-	99	71.569	ENSTRUG00000015354	grsf1	83	70.164	Takifugu_rubripes
ENSTNIG00000015350	-	99	56.190	ENSXMAG00000029710	grsf1	82	56.190	Xiphophorus_maculatus