EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000015470 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5680 bases
Position: chr1:15204523-15210202
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000018540	RRM_5	PF13893.6	9.9e-07	1	1
ENSTNIP00000018540	RRM_1	PF00076.22	1.2e-13	1	1
ENSTNIP00000018540	SAP	PF02037.27	5.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018767	-	2340	-	ENSTNIP00000018540	780 (aa)	-	H3DDE7

Gene Model

Click here to download ENSTNIG00000015470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015470	safb	90	56.322	ENSG00000160633	SAFB	87	56.322	Homo_sapiens
ENSTNIG00000015470	safb	100	63.282	ENSAPOG00000022508	safb	91	64.039	Acanthochromis_polyacanthus
ENSTNIG00000015470	safb	76	41.232	ENSAMEG00000012254	SAFB	89	43.602	Ailuropoda_melanoleuca
ENSTNIG00000015470	safb	100	60.723	ENSACIG00000006247	safb	80	73.973	Amphilophus_citrinellus
ENSTNIG00000015470	safb	100	63.195	ENSAOCG00000006308	safb	95	64.321	Amphiprion_ocellaris
ENSTNIG00000015470	safb	100	63.432	ENSAPEG00000023342	safb	91	64.409	Amphiprion_percula
ENSTNIG00000015470	safb	100	65.690	ENSATEG00000004998	safb	91	65.848	Anabas_testudineus
ENSTNIG00000015470	safb	96	43.494	ENSAPLG00000005780	-	91	44.242	Anas_platyrhynchos
ENSTNIG00000015470	safb	68	41.043	ENSAPLG00000006355	-	94	44.485	Anas_platyrhynchos
ENSTNIG00000015470	safb	51	56.872	ENSACAG00000016893	-	96	42.801	Anolis_carolinensis
ENSTNIG00000015470	safb	97	57.647	ENSANAG00000028821	SAFB	87	57.647	Aotus_nancymaae
ENSTNIG00000015470	safb	100	62.655	ENSACLG00000001926	safb	91	61.911	Astatotilapia_calliptera
ENSTNIG00000015470	safb	100	54.177	ENSAMXG00000018154	safb	90	54.293	Astyanax_mexicanus
ENSTNIG00000015470	safb	100	42.807	ENSBTAG00000007875	SAFB	89	44.086	Bos_taurus
ENSTNIG00000015470	safb	77	53.913	ENSCJAG00000017081	SAFB	85	53.813	Callithrix_jacchus
ENSTNIG00000015470	safb	76	41.139	ENSCAFG00000018803	SAFB	77	44.192	Canis_familiaris
ENSTNIG00000015470	safb	76	41.139	ENSCAFG00020018943	SAFB	88	44.192	Canis_lupus_dingo
ENSTNIG00000015470	safb	100	42.991	ENSCHIG00000007262	SAFB	89	43.952	Capra_hircus
ENSTNIG00000015470	safb	52	48.951	ENSTSYG00000001851	-	80	48.578	Carlito_syrichta
ENSTNIG00000015470	safb	97	57.647	ENSCCAG00000020193	SAFB	87	57.647	Cebus_capucinus
ENSTNIG00000015470	safb	90	55.172	ENSCATG00000029994	SAFB	87	55.172	Cercocebus_atys
ENSTNIG00000015470	safb	73	40.541	ENSCLAG00000007734	SAFB	88	44.787	Chinchilla_lanigera
ENSTNIG00000015470	safb	100	43.412	ENSCSAG00000009949	SAFB	88	44.604	Chlorocebus_sabaeus
ENSTNIG00000015470	safb	58	34.064	ENSCHOG00000003208	SAFB	87	38.924	Choloepus_hoffmanni
ENSTNIG00000015470	safb	94	41.647	ENSCPBG00000010936	-	91	42.637	Chrysemys_picta_bellii
ENSTNIG00000015470	safb	94	41.205	ENSCPBG00000010928	-	77	45.723	Chrysemys_picta_bellii
ENSTNIG00000015470	safb	100	51.639	ENSCANG00000004774	-	84	56.322	Colobus_angolensis_palliatus
ENSTNIG00000015470	safb	99	42.424	ENSCANG00000019754	-	87	42.527	Colobus_angolensis_palliatus
ENSTNIG00000015470	safb	73	38.535	ENSCGRG00001002254	Safb	88	42.588	Cricetulus_griseus_chok1gshd
ENSTNIG00000015470	safb	85	72.222	ENSCSEG00000019870	safb	83	72.222	Cynoglossus_semilaevis
ENSTNIG00000015470	safb	100	54.135	ENSCVAG00000002226	safb	90	55.514	Cyprinodon_variegatus
ENSTNIG00000015470	safb	75	57.803	ENSDARG00000020467	safb	91	53.782	Danio_rerio
ENSTNIG00000015470	safb	100	43.345	ENSDNOG00000015746	SAFB	95	42.020	Dasypus_novemcinctus
ENSTNIG00000015470	safb	73	40.291	ENSDORG00000016200	Safb	88	40.071	Dipodomys_ordii
ENSTNIG00000015470	safb	73	39.326	ENSEASG00005023019	SAFB	88	42.774	Equus_asinus_asinus
ENSTNIG00000015470	safb	73	39.032	ENSECAG00000018659	SAFB	81	43.325	Equus_caballus
ENSTNIG00000015470	safb	99	55.235	ENSELUG00000022327	safb	72	62.791	Esox_lucius
ENSTNIG00000015470	safb	76	40.823	ENSFCAG00000011835	SAFB	88	44.258	Felis_catus
ENSTNIG00000015470	safb	100	43.643	ENSFALG00000013882	-	81	44.855	Ficedula_albicollis
ENSTNIG00000015470	safb	88	51.240	ENSFDAG00000020306	SAFB	90	51.240	Fukomys_damarensis
ENSTNIG00000015470	safb	86	70.930	ENSFHEG00000004219	safb	80	70.930	Fundulus_heteroclitus
ENSTNIG00000015470	safb	100	57.371	ENSGMOG00000014280	safb	91	59.703	Gadus_morhua
ENSTNIG00000015470	safb	100	45.052	ENSGALG00000013365	-	89	45.508	Gallus_gallus
ENSTNIG00000015470	safb	73	40.819	ENSGALG00000001948	-	89	44.669	Gallus_gallus
ENSTNIG00000015470	safb	100	55.901	ENSGAFG00000016162	safb	91	56.473	Gambusia_affinis
ENSTNIG00000015470	safb	100	63.081	ENSGACG00000011385	safb	91	62.347	Gasterosteus_aculeatus
ENSTNIG00000015470	safb	67	50.266	ENSGAGG00000017702	-	80	51.601	Gopherus_agassizii
ENSTNIG00000015470	safb	100	44.295	ENSGAGG00000008424	-	93	44.766	Gopherus_agassizii
ENSTNIG00000015470	safb	90	56.322	ENSGGOG00000015109	SAFB	87	56.322	Gorilla_gorilla
ENSTNIG00000015470	safb	100	57.407	ENSHBUG00000009218	safb	69	66.167	Haplochromis_burtoni
ENSTNIG00000015470	safb	73	41.167	ENSHGLG00000015883	SAFB	88	44.458	Heterocephalus_glaber_female
ENSTNIG00000015470	safb	96	57.477	ENSHCOG00000001705	safb	93	58.127	Hippocampus_comes
ENSTNIG00000015470	safb	100	54.513	ENSIPUG00000024869	safb2	91	54.788	Ictalurus_punctatus
ENSTNIG00000015470	safb	69	38.765	ENSSTOG00000002783	SAFB	91	43.176	Ictidomys_tridecemlineatus
ENSTNIG00000015470	safb	76	69.130	ENSKMAG00000022308	safb	68	68.966	Kryptolebias_marmoratus
ENSTNIG00000015470	safb	100	61.772	ENSLBEG00000006015	safb	91	63.196	Labrus_bergylta
ENSTNIG00000015470	safb	73	40.185	ENSLACG00000018090	SAFB	90	44.196	Latimeria_chalumnae
ENSTNIG00000015470	safb	100	54.816	ENSLOCG00000003613	safb	99	52.294	Lepisosteus_oculatus
ENSTNIG00000015470	safb	100	42.209	ENSLAFG00000003840	SAFB	89	43.556	Loxodonta_africana
ENSTNIG00000015470	safb	90	55.172	ENSMFAG00000003885	SAFB	87	55.172	Macaca_fascicularis
ENSTNIG00000015470	safb	90	55.172	ENSMMUG00000017970	SAFB	87	55.172	Macaca_mulatta
ENSTNIG00000015470	safb	90	55.172	ENSMNEG00000035637	SAFB	86	55.172	Macaca_nemestrina
ENSTNIG00000015470	safb	100	43.473	ENSMLEG00000038637	SAFB	88	43.081	Mandrillus_leucophaeus
ENSTNIG00000015470	safb	100	64.259	ENSMAMG00000003357	safb	62	72.078	Mastacembelus_armatus
ENSTNIG00000015470	safb	100	63.228	ENSMZEG00005009120	safb	91	62.035	Maylandia_zebra
ENSTNIG00000015470	safb	73	41.167	ENSMGAG00000001051	-	95	45.597	Meleagris_gallopavo
ENSTNIG00000015470	safb	99	42.459	ENSMGAG00000001101	-	91	43.326	Meleagris_gallopavo
ENSTNIG00000015470	safb	95	38.035	ENSMICG00000046795	-	69	65.672	Microcebus_murinus
ENSTNIG00000015470	safb	74	57.471	ENSMICG00000008739	-	87	57.471	Microcebus_murinus
ENSTNIG00000015470	safb	100	42.230	ENSMODG00000001236	SAFB	88	42.759	Monodelphis_domestica
ENSTNIG00000015470	safb	100	63.559	ENSMALG00000020330	safb	96	63.659	Monopterus_albus
ENSTNIG00000015470	safb	76	39.683	ENSMPUG00000006123	SAFB	83	43.468	Mustela_putorius_furo
ENSTNIG00000015470	safb	100	44.125	ENSMLUG00000001081	SAFB	88	44.019	Myotis_lucifugus
ENSTNIG00000015470	safb	90	56.322	ENSNLEG00000013551	SAFB	91	56.322	Nomascus_leucogenys
ENSTNIG00000015470	safb	73	40.382	ENSODEG00000014838	SAFB	88	44.537	Octodon_degus
ENSTNIG00000015470	safb	100	64.024	ENSONIG00000002318	safb	91	63.293	Oreochromis_niloticus
ENSTNIG00000015470	safb	82	38.881	ENSOCUG00000014628	SAFB	80	38.507	Oryctolagus_cuniculus
ENSTNIG00000015470	safb	100	60.658	ENSORLG00000016989	safb	90	60.097	Oryzias_latipes
ENSTNIG00000015470	safb	76	66.054	ENSORLG00020000404	safb	68	66.555	Oryzias_latipes_hni
ENSTNIG00000015470	safb	100	60.658	ENSORLG00015010733	safb	78	68.943	Oryzias_latipes_hsok
ENSTNIG00000015470	safb	73	40.783	ENSOGAG00000027769	SAFB	89	42.908	Otolemur_garnettii
ENSTNIG00000015470	safb	90	37.304	ENSOARG00000007856	-	100	38.051	Ovis_aries
ENSTNIG00000015470	safb	100	39.721	ENSOARG00000007662	-	89	40.909	Ovis_aries
ENSTNIG00000015470	safb	90	56.322	ENSPPAG00000035129	SAFB	87	56.322	Pan_paniscus
ENSTNIG00000015470	safb	76	40.823	ENSPPRG00000017197	SAFB	88	44.258	Panthera_pardus
ENSTNIG00000015470	safb	90	56.322	ENSPTRG00000010335	SAFB	87	56.322	Pan_troglodytes
ENSTNIG00000015470	safb	90	55.172	ENSPANG00000007770	SAFB	87	55.172	Papio_anubis
ENSTNIG00000015470	safb	100	55.476	ENSPKIG00000009902	safb	91	54.708	Paramormyrops_kingsleyae
ENSTNIG00000015470	safb	100	44.785	ENSPSIG00000009367	-	89	45.183	Pelodiscus_sinensis
ENSTNIG00000015470	safb	100	44.215	ENSPSIG00000011679	-	91	45.150	Pelodiscus_sinensis
ENSTNIG00000015470	safb	52	49.130	ENSPCIG00000009504	-	88	55.430	Phascolarctos_cinereus
ENSTNIG00000015470	safb	100	57.393	ENSPFOG00000007745	safb	99	55.896	Poecilia_formosa
ENSTNIG00000015470	safb	76	63.262	ENSPLAG00000001614	safb	66	63.921	Poecilia_latipinna
ENSTNIG00000015470	safb	100	57.572	ENSPMEG00000021023	safb	95	57.750	Poecilia_mexicana
ENSTNIG00000015470	safb	100	56.821	ENSPREG00000012496	safb	90	57.196	Poecilia_reticulata
ENSTNIG00000015470	safb	100	43.396	ENSPPYG00000009428	SAFB	88	44.591	Pongo_abelii
ENSTNIG00000015470	safb	100	41.537	ENSPCAG00000006475	SAFB	88	41.707	Procavia_capensis
ENSTNIG00000015470	safb	90	56.322	ENSPCOG00000014090	SAFB	87	56.322	Propithecus_coquereli
ENSTNIG00000015470	safb	95	43.653	ENSPVAG00000004913	SAFB	82	43.653	Pteropus_vampyrus
ENSTNIG00000015470	safb	100	54.545	ENSPNAG00000021838	safb	91	53.483	Pygocentrus_nattereri
ENSTNIG00000015470	safb	97	43.774	ENSRBIG00000042509	SAFB	86	43.363	Rhinopithecus_bieti
ENSTNIG00000015470	safb	90	56.322	ENSRROG00000029278	SAFB	87	56.322	Rhinopithecus_roxellana
ENSTNIG00000015470	safb	97	57.647	ENSSBOG00000026291	SAFB	87	57.647	Saimiri_boliviensis_boliviensis
ENSTNIG00000015470	safb	100	52.558	ENSSFOG00015008156	safb	91	51.515	Scleropages_formosus
ENSTNIG00000015470	safb	100	63.581	ENSSMAG00000009316	safb	91	63.570	Scophthalmus_maximus
ENSTNIG00000015470	safb	93	71.151	ENSSDUG00000009652	safb	91	71.313	Seriola_dumerili
ENSTNIG00000015470	safb	100	64.670	ENSSLDG00000001670	safb	91	64.425	Seriola_lalandi_dorsalis
ENSTNIG00000015470	safb	95	71.824	ENSSPAG00000015682	safb	91	71.987	Stegastes_partitus
ENSTNIG00000015470	safb	100	41.551	ENSSSCG00000013522	SAFB	96	45.443	Sus_scrofa
ENSTNIG00000015470	safb	73	41.667	ENSTGUG00000000489	-	95	45.087	Taeniopygia_guttata
ENSTNIG00000015470	safb	100	43.837	ENSTGUG00000000502	-	92	44.175	Taeniopygia_guttata
ENSTNIG00000015470	safb	100	70.948	ENSTRUG00000003567	safb	91	71.755	Takifugu_rubripes
ENSTNIG00000015470	safb	87	77.143	ENSTTRG00000013588	SAFB	77	77.143	Tursiops_truncatus
ENSTNIG00000015470	safb	52	52.097	ENSUAMG00000024543	SAFB	66	49.713	Ursus_americanus
ENSTNIG00000015470	safb	76	40.973	ENSUMAG00000009734	SAFB	85	41.957	Ursus_maritimus
ENSTNIG00000015470	safb	76	40.981	ENSVVUG00000013720	SAFB	77	44.086	Vulpes_vulpes
ENSTNIG00000015470	safb	73	41.491	ENSXETG00000008755	safb	92	44.917	Xenopus_tropicalis
ENSTNIG00000015470	safb	100	57.803	ENSXMAG00000003458	safb	90	58.801	Xiphophorus_maculatus