EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000015570 (Gene tree)
Gene ID: -
Gene Symbol: lsg1
Alias: fb99b06|wu:fb99b06|zgc:76988
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 3805 bases
Position: chr1:16991026-16994830
Accession: ZDB-GENE-030131-2184
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000018642	MMR_HSR1	PF01926.23	9.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018869	-	1902	-	ENSTNIP00000018642	633 (aa)	-	H3DDP9

Gene Model

Click here to download ENSTNIG00000015570's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015570's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015570	lsg1	99	64.350	ENSG00000041802	LSG1	89	75.625	Homo_sapiens
ENSTNIG00000015570	lsg1	100	79.499	ENSAPOG00000009694	lsg1	98	79.454	Acanthochromis_polyacanthus
ENSTNIG00000015570	lsg1	100	62.913	ENSAMEG00000009343	LSG1	98	63.077	Ailuropoda_melanoleuca
ENSTNIG00000015570	lsg1	98	80.998	ENSACIG00000012406	lsg1	97	80.906	Amphilophus_citrinellus
ENSTNIG00000015570	lsg1	100	78.906	ENSAOCG00000016066	lsg1	98	79.487	Amphiprion_ocellaris
ENSTNIG00000015570	lsg1	100	80.000	ENSAPEG00000003252	lsg1	98	79.487	Amphiprion_percula
ENSTNIG00000015570	lsg1	98	79.809	ENSATEG00000011794	lsg1	97	79.073	Anabas_testudineus
ENSTNIG00000015570	lsg1	95	61.722	ENSACAG00000004222	LSG1	100	61.514	Anolis_carolinensis
ENSTNIG00000015570	lsg1	99	63.897	ENSANAG00000021153	LSG1	97	65.116	Aotus_nancymaae
ENSTNIG00000015570	lsg1	100	80.061	ENSACLG00000000520	lsg1	98	79.717	Astatotilapia_calliptera
ENSTNIG00000015570	lsg1	100	72.840	ENSAMXG00000008271	lsg1	98	73.101	Astyanax_mexicanus
ENSTNIG00000015570	lsg1	99	64.545	ENSBTAG00000008461	LSG1	97	65.211	Bos_taurus
ENSTNIG00000015570	lsg1	77	47.137	WBGene00016907	C53H9.2	80	57.025	Caenorhabditis_elegans
ENSTNIG00000015570	lsg1	99	64.458	ENSCJAG00000013962	LSG1	97	63.222	Callithrix_jacchus
ENSTNIG00000015570	lsg1	95	65.665	ENSCAFG00000013445	LSG1	100	65.348	Canis_familiaris
ENSTNIG00000015570	lsg1	100	64.565	ENSCAFG00020002216	LSG1	99	65.127	Canis_lupus_dingo
ENSTNIG00000015570	lsg1	100	64.297	ENSCHIG00000015769	LSG1	98	65.039	Capra_hircus
ENSTNIG00000015570	lsg1	99	64.599	ENSTSYG00000001447	LSG1	97	64.651	Carlito_syrichta
ENSTNIG00000015570	lsg1	95	65.289	ENSCAPG00000009856	LSG1	99	64.228	Cavia_aperea
ENSTNIG00000015570	lsg1	99	63.705	ENSCCAG00000035744	LSG1	97	63.889	Cebus_capucinus
ENSTNIG00000015570	lsg1	99	64.307	ENSCATG00000042060	LSG1	97	63.721	Cercocebus_atys
ENSTNIG00000015570	lsg1	99	63.746	ENSCSAG00000008796	LSG1	89	64.806	Chlorocebus_sabaeus
ENSTNIG00000015570	lsg1	100	64.555	ENSCPBG00000015941	LSG1	82	64.462	Chrysemys_picta_bellii
ENSTNIG00000015570	lsg1	77	55.128	ENSCING00000007079	-	88	60.714	Ciona_intestinalis
ENSTNIG00000015570	lsg1	86	55.777	ENSCSAVG00000002514	-	95	55.745	Ciona_savignyi
ENSTNIG00000015570	lsg1	99	64.157	ENSCANG00000030709	LSG1	97	64.969	Colobus_angolensis_palliatus
ENSTNIG00000015570	lsg1	99	64.165	ENSCGRG00001019846	Lsg1	97	64.094	Cricetulus_griseus_chok1gshd
ENSTNIG00000015570	lsg1	99	64.165	ENSCGRG00000014617	Lsg1	97	64.075	Cricetulus_griseus_crigri
ENSTNIG00000015570	lsg1	98	75.625	ENSCSEG00000008522	lsg1	97	74.686	Cynoglossus_semilaevis
ENSTNIG00000015570	lsg1	97	77.994	ENSCVAG00000002484	lsg1	97	78.641	Cyprinodon_variegatus
ENSTNIG00000015570	lsg1	100	75.231	ENSDARG00000015352	lsg1	97	75.559	Danio_rerio
ENSTNIG00000015570	lsg1	99	65.303	ENSDNOG00000006224	LSG1	97	65.163	Dasypus_novemcinctus
ENSTNIG00000015570	lsg1	99	50.391	FBgn0266284	Ns3	97	50.322	Drosophila_melanogaster
ENSTNIG00000015570	lsg1	87	73.333	ENSETEG00000003888	LSG1	87	76.271	Echinops_telfairi
ENSTNIG00000015570	lsg1	88	56.048	ENSEBUG00000003119	lsg1	85	56.164	Eptatretus_burgeri
ENSTNIG00000015570	lsg1	99	64.468	ENSEASG00005000678	LSG1	97	64.241	Equus_asinus_asinus
ENSTNIG00000015570	lsg1	99	64.318	ENSECAG00000017659	LSG1	97	64.241	Equus_caballus
ENSTNIG00000015570	lsg1	86	60.684	ENSEEUG00000015217	LSG1	75	60.684	Erinaceus_europaeus
ENSTNIG00000015570	lsg1	100	71.384	ENSELUG00000023973	lsg1	98	71.132	Esox_lucius
ENSTNIG00000015570	lsg1	100	64.404	ENSFCAG00000024957	LSG1	98	64.606	Felis_catus
ENSTNIG00000015570	lsg1	92	62.319	ENSFALG00000007210	LSG1	94	62.825	Ficedula_albicollis
ENSTNIG00000015570	lsg1	99	63.581	ENSFDAG00000017373	LSG1	97	64.669	Fukomys_damarensis
ENSTNIG00000015570	lsg1	97	78.560	ENSFHEG00000003680	lsg1	97	78.560	Fundulus_heteroclitus
ENSTNIG00000015570	lsg1	98	70.513	ENSGMOG00000015834	lsg1	97	70.531	Gadus_morhua
ENSTNIG00000015570	lsg1	99	61.826	ENSGALG00000007058	LSG1	86	61.231	Gallus_gallus
ENSTNIG00000015570	lsg1	97	78.548	ENSGAFG00000015831	lsg1	97	78.226	Gambusia_affinis
ENSTNIG00000015570	lsg1	98	78.150	ENSGACG00000009323	lsg1	97	78.205	Gasterosteus_aculeatus
ENSTNIG00000015570	lsg1	99	63.897	ENSGGOG00000000520	LSG1	97	65.533	Gorilla_gorilla
ENSTNIG00000015570	lsg1	100	81.056	ENSHBUG00000005659	lsg1	98	80.732	Haplochromis_burtoni
ENSTNIG00000015570	lsg1	99	64.297	ENSHGLG00000017390	LSG1	97	63.981	Heterocephalus_glaber_female
ENSTNIG00000015570	lsg1	99	64.142	ENSHGLG00100018587	LSG1	97	63.823	Heterocephalus_glaber_male
ENSTNIG00000015570	lsg1	97	78.754	ENSHCOG00000016848	lsg1	97	78.594	Hippocampus_comes
ENSTNIG00000015570	lsg1	100	74.686	ENSIPUG00000008631	lsg1	97	74.637	Ictalurus_punctatus
ENSTNIG00000015570	lsg1	75	58.416	ENSSTOG00000010234	LSG1	92	59.245	Ictidomys_tridecemlineatus
ENSTNIG00000015570	lsg1	99	64.969	ENSJJAG00000015513	Lsg1	97	63.750	Jaculus_jaculus
ENSTNIG00000015570	lsg1	98	76.849	ENSKMAG00000009681	lsg1	97	76.898	Kryptolebias_marmoratus
ENSTNIG00000015570	lsg1	98	80.354	ENSLBEG00000024261	lsg1	97	79.417	Labrus_bergylta
ENSTNIG00000015570	lsg1	100	65.419	ENSLACG00000013399	LSG1	98	66.411	Latimeria_chalumnae
ENSTNIG00000015570	lsg1	98	69.436	ENSLOCG00000004918	lsg1	97	68.896	Lepisosteus_oculatus
ENSTNIG00000015570	lsg1	99	65.538	ENSLAFG00000012919	-	97	66.088	Loxodonta_africana
ENSTNIG00000015570	lsg1	99	63.746	ENSMFAG00000039903	LSG1	97	63.247	Macaca_fascicularis
ENSTNIG00000015570	lsg1	99	63.595	ENSMMUG00000010708	LSG1	97	64.165	Macaca_mulatta
ENSTNIG00000015570	lsg1	99	63.595	ENSMNEG00000031538	LSG1	97	63.093	Macaca_nemestrina
ENSTNIG00000015570	lsg1	99	63.444	ENSMLEG00000041184	LSG1	97	64.012	Mandrillus_leucophaeus
ENSTNIG00000015570	lsg1	100	77.551	ENSMAMG00000000470	lsg1	98	77.419	Mastacembelus_armatus
ENSTNIG00000015570	lsg1	100	81.056	ENSMZEG00005017865	lsg1	98	80.732	Maylandia_zebra
ENSTNIG00000015570	lsg1	88	62.521	ENSMGAG00000007050	LSG1	99	62.309	Meleagris_gallopavo
ENSTNIG00000015570	lsg1	91	63.776	ENSMAUG00000016976	Lsg1	90	63.339	Mesocricetus_auratus
ENSTNIG00000015570	lsg1	99	63.485	ENSMICG00000049087	LSG1	97	64.286	Microcebus_murinus
ENSTNIG00000015570	lsg1	99	62.879	ENSMOCG00000022136	Lsg1	97	62.791	Microtus_ochrogaster
ENSTNIG00000015570	lsg1	87	86.817	ENSMMOG00000008884	lsg1	97	77.868	Mola_mola
ENSTNIG00000015570	lsg1	99	56.019	ENSMODG00000019828	LSG1	98	54.726	Monodelphis_domestica
ENSTNIG00000015570	lsg1	100	65.070	MGP_CAROLIEiJ_G0020648	Lsg1	98	65.610	Mus_caroli
ENSTNIG00000015570	lsg1	100	65.224	ENSMUSG00000022538	Lsg1	98	65.769	Mus_musculus
ENSTNIG00000015570	lsg1	98	64.587	MGP_PahariEiJ_G0016352	Lsg1	97	64.945	Mus_pahari
ENSTNIG00000015570	lsg1	100	65.379	MGP_SPRETEiJ_G0021544	Lsg1	98	65.452	Mus_spretus
ENSTNIG00000015570	lsg1	100	63.964	ENSMPUG00000003734	LSG1	98	64.154	Mustela_putorius_furo
ENSTNIG00000015570	lsg1	100	64.006	ENSMLUG00000012548	LSG1	98	64.506	Myotis_lucifugus
ENSTNIG00000015570	lsg1	99	63.594	ENSNGAG00000021872	Lsg1	97	64.094	Nannospalax_galili
ENSTNIG00000015570	lsg1	99	63.897	ENSNLEG00000008293	LSG1	97	64.043	Nomascus_leucogenys
ENSTNIG00000015570	lsg1	69	69.697	ENSMEUG00000009041	-	82	69.697	Notamacropus_eugenii
ENSTNIG00000015570	lsg1	100	80.431	ENSONIG00000002635	lsg1	98	80.095	Oreochromis_niloticus
ENSTNIG00000015570	lsg1	95	65.293	ENSOANG00000012742	LSG1	99	65.968	Ornithorhynchus_anatinus
ENSTNIG00000015570	lsg1	99	65.106	ENSOCUG00000004817	LSG1	97	65.325	Oryctolagus_cuniculus
ENSTNIG00000015570	lsg1	98	76.518	ENSORLG00000007695	lsg1	97	76.404	Oryzias_latipes
ENSTNIG00000015570	lsg1	98	76.911	ENSORLG00020016286	lsg1	97	76.800	Oryzias_latipes_hni
ENSTNIG00000015570	lsg1	98	76.688	ENSORLG00015012025	lsg1	97	76.214	Oryzias_latipes_hsok
ENSTNIG00000015570	lsg1	98	75.520	ENSOMEG00000022379	lsg1	97	75.563	Oryzias_melastigma
ENSTNIG00000015570	lsg1	99	63.378	ENSOGAG00000003475	LSG1	97	63.247	Otolemur_garnettii
ENSTNIG00000015570	lsg1	100	64.060	ENSOARG00000020403	LSG1	98	63.919	Ovis_aries
ENSTNIG00000015570	lsg1	99	64.804	ENSPPAG00000029271	LSG1	97	65.278	Pan_paniscus
ENSTNIG00000015570	lsg1	100	63.582	ENSPPRG00000010281	LSG1	98	63.761	Panthera_pardus
ENSTNIG00000015570	lsg1	100	64.253	ENSPTIG00000010789	LSG1	98	64.451	Panthera_tigris_altaica
ENSTNIG00000015570	lsg1	99	64.653	ENSPTRG00000015760	LSG1	97	65.123	Pan_troglodytes
ENSTNIG00000015570	lsg1	99	64.006	ENSPANG00000018249	LSG1	97	62.997	Papio_anubis
ENSTNIG00000015570	lsg1	99	70.846	ENSPKIG00000002895	lsg1	97	71.337	Paramormyrops_kingsleyae
ENSTNIG00000015570	lsg1	96	60.726	ENSPSIG00000009821	LSG1	99	60.568	Pelodiscus_sinensis
ENSTNIG00000015570	lsg1	95	77.025	ENSPMGG00000000931	lsg1	100	77.025	Periophthalmus_magnuspinnatus
ENSTNIG00000015570	lsg1	99	63.706	ENSPEMG00000012082	-	97	63.893	Peromyscus_maniculatus_bairdii
ENSTNIG00000015570	lsg1	99	60.479	ENSPMAG00000007451	lsg1	98	60.643	Petromyzon_marinus
ENSTNIG00000015570	lsg1	98	67.895	ENSPCIG00000013890	LSG1	80	67.895	Phascolarctos_cinereus
ENSTNIG00000015570	lsg1	97	78.491	ENSPFOG00000021882	lsg1	97	78.331	Poecilia_formosa
ENSTNIG00000015570	lsg1	97	77.368	ENSPLAG00000019536	lsg1	97	77.368	Poecilia_latipinna
ENSTNIG00000015570	lsg1	97	77.440	ENSPMEG00000017281	lsg1	97	77.280	Poecilia_mexicana
ENSTNIG00000015570	lsg1	97	66.035	ENSPREG00000006048	lsg1	97	65.877	Poecilia_reticulata
ENSTNIG00000015570	lsg1	92	63.651	ENSPPYG00000014425	LSG1	97	63.025	Pongo_abelii
ENSTNIG00000015570	lsg1	89	70.667	ENSPCAG00000005511	LSG1	79	74.576	Procavia_capensis
ENSTNIG00000015570	lsg1	99	63.788	ENSPCOG00000012360	LSG1	97	63.975	Propithecus_coquereli
ENSTNIG00000015570	lsg1	100	80.061	ENSPNYG00000021994	lsg1	98	79.717	Pundamilia_nyererei
ENSTNIG00000015570	lsg1	100	73.220	ENSPNAG00000015533	lsg1	98	73.016	Pygocentrus_nattereri
ENSTNIG00000015570	lsg1	100	64.231	ENSRNOG00000001727	Lsg1	98	64.587	Rattus_norvegicus
ENSTNIG00000015570	lsg1	99	63.540	ENSRBIG00000029053	LSG1	97	63.665	Rhinopithecus_bieti
ENSTNIG00000015570	lsg1	99	63.540	ENSRROG00000037702	LSG1	97	63.665	Rhinopithecus_roxellana
ENSTNIG00000015570	lsg1	83	41.101	YGL099W	LSG1	75	41.791	Saccharomyces_cerevisiae
ENSTNIG00000015570	lsg1	99	63.746	ENSSBOG00000034938	LSG1	97	65.123	Saimiri_boliviensis_boliviensis
ENSTNIG00000015570	lsg1	77	62.808	ENSSHAG00000003487	LSG1	100	63.098	Sarcophilus_harrisii
ENSTNIG00000015570	lsg1	98	73.046	ENSSFOG00015008955	lsg1	97	71.746	Scleropages_formosus
ENSTNIG00000015570	lsg1	98	82.120	ENSSDUG00000004622	lsg1	98	81.876	Seriola_dumerili
ENSTNIG00000015570	lsg1	98	79.272	ENSSLDG00000010869	lsg1	97	79.014	Seriola_lalandi_dorsalis
ENSTNIG00000015570	lsg1	82	65.396	ENSSARG00000012981	LSG1	63	71.523	Sorex_araneus
ENSTNIG00000015570	lsg1	100	65.053	ENSSPUG00000016347	LSG1	97	63.963	Sphenodon_punctatus
ENSTNIG00000015570	lsg1	100	77.865	ENSSPAG00000005508	lsg1	98	79.549	Stegastes_partitus
ENSTNIG00000015570	lsg1	100	63.846	ENSSSCG00000011827	LSG1	98	62.871	Sus_scrofa
ENSTNIG00000015570	lsg1	88	61.474	ENSTGUG00000009068	LSG1	100	61.307	Taeniopygia_guttata
ENSTNIG00000015570	lsg1	97	82.820	ENSTRUG00000017380	lsg1	97	81.429	Takifugu_rubripes
ENSTNIG00000015570	lsg1	91	68.333	ENSTTRG00000000559	LSG1	89	68.333	Tursiops_truncatus
ENSTNIG00000015570	lsg1	100	63.609	ENSUAMG00000012454	LSG1	98	63.945	Ursus_americanus
ENSTNIG00000015570	lsg1	100	63.609	ENSUMAG00000000855	LSG1	98	63.945	Ursus_maritimus
ENSTNIG00000015570	lsg1	95	61.173	ENSVPAG00000012400	LSG1	100	60.726	Vicugna_pacos
ENSTNIG00000015570	lsg1	95	64.921	ENSVVUG00000008956	LSG1	97	64.603	Vulpes_vulpes
ENSTNIG00000015570	lsg1	100	65.749	ENSXETG00000003451	lsg1	98	65.600	Xenopus_tropicalis
ENSTNIG00000015570	lsg1	97	78.778	ENSXCOG00000003239	lsg1	97	78.135	Xiphophorus_couchianus
ENSTNIG00000015570	lsg1	97	78.056	ENSXMAG00000005536	lsg1	98	77.429	Xiphophorus_maculatus