EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000015681 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6636 bases
Position: chr2:20112321-20118956
Accession: ZDB-GENE-030131-6451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000018756	TUDOR	PF00567.24	1.5e-71	1	5
ENSTNIP00000018756	TUDOR	PF00567.24	1.5e-71	2	5
ENSTNIP00000018756	TUDOR	PF00567.24	1.5e-71	3	5
ENSTNIP00000018756	TUDOR	PF00567.24	1.5e-71	4	5
ENSTNIP00000018756	TUDOR	PF00567.24	1.5e-71	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000018984	-	3435	-	ENSTNIP00000018756	1145 (aa)	-	H3DE13

Gene Model

Click here to download ENSTNIG00000015681's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015681's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015681	rnf17	100	35.333	ENSG00000132972	RNF17	99	35.458	Homo_sapiens
ENSTNIG00000015681	rnf17	92	55.059	ENSAPOG00000017034	rnf17	74	55.059	Acanthochromis_polyacanthus
ENSTNIG00000015681	rnf17	100	33.939	ENSAMEG00000017340	RNF17	74	33.939	Ailuropoda_melanoleuca
ENSTNIG00000015681	rnf17	99	56.229	ENSAOCG00000018283	rnf17	74	56.229	Amphiprion_ocellaris
ENSTNIG00000015681	rnf17	99	53.494	ENSAPEG00000022338	rnf17	83	53.322	Amphiprion_percula
ENSTNIG00000015681	rnf17	94	56.066	ENSATEG00000002067	rnf17	77	56.066	Anabas_testudineus
ENSTNIG00000015681	rnf17	100	31.938	ENSAPLG00000003969	RNF17	83	31.938	Anas_platyrhynchos
ENSTNIG00000015681	rnf17	99	32.479	ENSACAG00000001418	RNF17	75	32.397	Anolis_carolinensis
ENSTNIG00000015681	rnf17	97	30.880	ENSANAG00000029969	RNF17	83	37.209	Aotus_nancymaae
ENSTNIG00000015681	rnf17	99	54.401	ENSACLG00000018279	rnf17	74	54.401	Astatotilapia_calliptera
ENSTNIG00000015681	rnf17	99	49.636	ENSAMXG00000011002	rnf17	83	49.636	Astyanax_mexicanus
ENSTNIG00000015681	rnf17	74	33.687	ENSBTAG00000000278	RNF17	98	33.687	Bos_taurus
ENSTNIG00000015681	rnf17	100	35.124	ENSCJAG00000018937	RNF17	98	36.697	Callithrix_jacchus
ENSTNIG00000015681	rnf17	97	33.932	ENSCAFG00000007418	RNF17	77	33.932	Canis_familiaris
ENSTNIG00000015681	rnf17	66	38.567	ENSCAFG00020002919	-	98	34.299	Canis_lupus_dingo
ENSTNIG00000015681	rnf17	100	32.921	ENSCHIG00000026716	RNF17	98	33.687	Capra_hircus
ENSTNIG00000015681	rnf17	100	34.432	ENSTSYG00000000365	RNF17	98	34.796	Carlito_syrichta
ENSTNIG00000015681	rnf17	100	34.704	ENSCCAG00000026725	RNF17	98	35.909	Cebus_capucinus
ENSTNIG00000015681	rnf17	100	35.168	ENSCATG00000040352	RNF17	98	35.909	Cercocebus_atys
ENSTNIG00000015681	rnf17	100	33.498	ENSCLAG00000004127	RNF17	74	33.416	Chinchilla_lanigera
ENSTNIG00000015681	rnf17	100	35.168	ENSCSAG00000018019	RNF17	74	35.168	Chlorocebus_sabaeus
ENSTNIG00000015681	rnf17	72	44.030	ENSCHOG00000013310	RNF17	55	44.030	Choloepus_hoffmanni
ENSTNIG00000015681	rnf17	100	33.525	ENSCPBG00000020920	RNF17	77	33.525	Chrysemys_picta_bellii
ENSTNIG00000015681	rnf17	99	34.955	ENSCANG00000032927	RNF17	98	36.225	Colobus_angolensis_palliatus
ENSTNIG00000015681	rnf17	100	34.349	ENSCGRG00001022658	Rnf17	73	34.349	Cricetulus_griseus_chok1gshd
ENSTNIG00000015681	rnf17	100	34.349	ENSCGRG00000009924	Rnf17	73	34.349	Cricetulus_griseus_crigri
ENSTNIG00000015681	rnf17	99	48.547	ENSCSEG00000008626	rnf17	80	48.376	Cynoglossus_semilaevis
ENSTNIG00000015681	rnf17	92	48.124	ENSCVAG00000017008	rnf17	83	48.030	Cyprinodon_variegatus
ENSTNIG00000015681	rnf17	99	43.680	ENSDARG00000056387	rnf17	74	43.680	Danio_rerio
ENSTNIG00000015681	rnf17	100	33.251	ENSDNOG00000006115	RNF17	73	33.168	Dasypus_novemcinctus
ENSTNIG00000015681	rnf17	65	30.097	ENSEBUG00000016781	-	97	31.538	Eptatretus_burgeri
ENSTNIG00000015681	rnf17	68	38.440	ENSEASG00005001421	-	98	38.440	Equus_asinus_asinus
ENSTNIG00000015681	rnf17	100	33.526	ENSECAG00000017152	RNF17	72	33.526	Equus_caballus
ENSTNIG00000015681	rnf17	79	32.468	ENSEEUG00000000332	RNF17	65	32.468	Erinaceus_europaeus
ENSTNIG00000015681	rnf17	99	47.477	ENSELUG00000005626	rnf17	73	47.477	Esox_lucius
ENSTNIG00000015681	rnf17	100	33.911	ENSFCAG00000004914	RNF17	98	33.687	Felis_catus
ENSTNIG00000015681	rnf17	99	32.234	ENSFALG00000008766	RNF17	78	32.013	Ficedula_albicollis
ENSTNIG00000015681	rnf17	100	32.013	ENSFDAG00000017857	RNF17	73	32.343	Fukomys_damarensis
ENSTNIG00000015681	rnf17	99	51.211	ENSFHEG00000014822	rnf17	74	51.713	Fundulus_heteroclitus
ENSTNIG00000015681	rnf17	99	49.828	ENSGAFG00000004463	rnf17	89	49.744	Gambusia_affinis
ENSTNIG00000015681	rnf17	54	53.965	ENSGACG00000001340	-	100	53.965	Gasterosteus_aculeatus
ENSTNIG00000015681	rnf17	94	32.714	ENSGAGG00000016999	RNF17	70	32.621	Gopherus_agassizii
ENSTNIG00000015681	rnf17	100	35.086	ENSGGOG00000014491	RNF17	98	36.212	Gorilla_gorilla
ENSTNIG00000015681	rnf17	99	54.149	ENSHBUG00000003554	rnf17	74	54.149	Haplochromis_burtoni
ENSTNIG00000015681	rnf17	100	33.498	ENSHGLG00000007270	RNF17	73	33.498	Heterocephalus_glaber_female
ENSTNIG00000015681	rnf17	100	33.416	ENSHGLG00100017393	RNF17	74	33.416	Heterocephalus_glaber_male
ENSTNIG00000015681	rnf17	99	42.596	ENSHCOG00000017676	rnf17	85	42.770	Hippocampus_comes
ENSTNIG00000015681	rnf17	99	44.786	ENSIPUG00000001087	rnf17	79	44.701	Ictalurus_punctatus
ENSTNIG00000015681	rnf17	66	31.715	ENSSTOG00000011255	-	98	32.273	Ictidomys_tridecemlineatus
ENSTNIG00000015681	rnf17	100	33.223	ENSJJAG00000016584	Rnf17	73	33.223	Jaculus_jaculus
ENSTNIG00000015681	rnf17	99	54.484	ENSKMAG00000013403	rnf17	73	54.698	Kryptolebias_marmoratus
ENSTNIG00000015681	rnf17	92	53.811	ENSLBEG00000014910	rnf17	73	53.811	Labrus_bergylta
ENSTNIG00000015681	rnf17	88	35.814	ENSLACG00000000323	RNF17	81	35.814	Latimeria_chalumnae
ENSTNIG00000015681	rnf17	99	36.190	ENSLOCG00000010768	rnf17	74	36.280	Lepisosteus_oculatus
ENSTNIG00000015681	rnf17	100	35.251	ENSMFAG00000032388	RNF17	98	35.909	Macaca_fascicularis
ENSTNIG00000015681	rnf17	100	35.251	ENSMMUG00000014610	RNF17	98	35.909	Macaca_mulatta
ENSTNIG00000015681	rnf17	100	35.251	ENSMNEG00000011234	RNF17	98	36.254	Macaca_nemestrina
ENSTNIG00000015681	rnf17	100	35.314	ENSMLEG00000030227	RNF17	78	34.707	Mandrillus_leucophaeus
ENSTNIG00000015681	rnf17	99	51.255	ENSMAMG00000020403	rnf17	86	51.169	Mastacembelus_armatus
ENSTNIG00000015681	rnf17	99	54.317	ENSMZEG00005019166	rnf17	74	54.317	Maylandia_zebra
ENSTNIG00000015681	rnf17	100	32.479	ENSMGAG00000015138	RNF17	96	32.479	Meleagris_gallopavo
ENSTNIG00000015681	rnf17	100	33.169	ENSMAUG00000004788	Rnf17	73	32.949	Mesocricetus_auratus
ENSTNIG00000015681	rnf17	100	34.160	ENSMICG00000010364	RNF17	98	33.737	Microcebus_murinus
ENSTNIG00000015681	rnf17	73	34.443	ENSMOCG00000011818	-	99	34.443	Microtus_ochrogaster
ENSTNIG00000015681	rnf17	96	70.073	ENSMMOG00000019514	rnf17	82	70.073	Mola_mola
ENSTNIG00000015681	rnf17	100	33.609	ENSMODG00000007827	RNF17	72	33.609	Monodelphis_domestica
ENSTNIG00000015681	rnf17	94	53.508	ENSMALG00000016943	rnf17	74	53.601	Monopterus_albus
ENSTNIG00000015681	rnf17	100	33.995	MGP_CAROLIEiJ_G0019337	Rnf17	73	33.995	Mus_caroli
ENSTNIG00000015681	rnf17	100	33.747	ENSMUSG00000000365	Rnf17	73	33.747	Mus_musculus
ENSTNIG00000015681	rnf17	100	34.048	MGP_PahariEiJ_G0030355	Rnf17	73	34.048	Mus_pahari
ENSTNIG00000015681	rnf17	100	34.078	MGP_SPRETEiJ_G0020228	Rnf17	73	34.078	Mus_spretus
ENSTNIG00000015681	rnf17	100	33.691	ENSMPUG00000013305	RNF17	74	33.691	Mustela_putorius_furo
ENSTNIG00000015681	rnf17	100	33.800	ENSMLUG00000003903	RNF17	74	33.800	Myotis_lucifugus
ENSTNIG00000015681	rnf17	100	33.554	ENSNGAG00000013553	Rnf17	73	33.554	Nannospalax_galili
ENSTNIG00000015681	rnf17	99	55.726	ENSNBRG00000012006	rnf17	84	55.726	Neolamprologus_brichardi
ENSTNIG00000015681	rnf17	100	35.037	ENSNLEG00000013780	RNF17	98	35.671	Nomascus_leucogenys
ENSTNIG00000015681	rnf17	55	30.289	ENSODEG00000005443	-	98	30.441	Octodon_degus
ENSTNIG00000015681	rnf17	99	53.646	ENSONIG00000015746	rnf17	99	53.167	Oreochromis_niloticus
ENSTNIG00000015681	rnf17	99	33.581	ENSOCUG00000007384	RNF17	73	33.498	Oryctolagus_cuniculus
ENSTNIG00000015681	rnf17	99	50.715	ENSORLG00000012818	rnf17	84	50.885	Oryzias_latipes
ENSTNIG00000015681	rnf17	99	50.463	ENSORLG00020009879	-	75	50.716	Oryzias_latipes_hni
ENSTNIG00000015681	rnf17	99	50.295	ENSORLG00015013027	-	75	50.548	Oryzias_latipes_hsok
ENSTNIG00000015681	rnf17	94	49.402	ENSOMEG00000009891	rnf17	87	49.402	Oryzias_melastigma
ENSTNIG00000015681	rnf17	100	32.948	ENSOGAG00000014803	RNF17	74	32.948	Otolemur_garnettii
ENSTNIG00000015681	rnf17	100	32.756	ENSOARG00000014641	RNF17	74	32.838	Ovis_aries
ENSTNIG00000015681	rnf17	100	35.338	ENSPPAG00000028779	RNF17	98	36.377	Pan_paniscus
ENSTNIG00000015681	rnf17	100	34.104	ENSPPRG00000009230	RNF17	98	33.687	Panthera_pardus
ENSTNIG00000015681	rnf17	100	34.021	ENSPTIG00000001738	RNF17	98	33.687	Panthera_tigris_altaica
ENSTNIG00000015681	rnf17	100	35.338	ENSPTRG00000005713	RNF17	98	36.377	Pan_troglodytes
ENSTNIG00000015681	rnf17	100	35.333	ENSPANG00000007640	RNF17	98	35.909	Papio_anubis
ENSTNIG00000015681	rnf17	99	42.530	ENSPKIG00000001648	rnf17	90	42.506	Paramormyrops_kingsleyae
ENSTNIG00000015681	rnf17	100	34.344	ENSPSIG00000011245	RNF17	99	34.262	Pelodiscus_sinensis
ENSTNIG00000015681	rnf17	100	33.691	ENSPEMG00000008693	Rnf17	73	33.691	Peromyscus_maniculatus_bairdii
ENSTNIG00000015681	rnf17	89	32.903	ENSPCIG00000009190	-	94	32.903	Phascolarctos_cinereus
ENSTNIG00000015681	rnf17	99	52.269	ENSPFOG00000007124	rnf17	74	52.838	Poecilia_formosa
ENSTNIG00000015681	rnf17	99	52.886	ENSPLAG00000006198	rnf17	74	53.288	Poecilia_latipinna
ENSTNIG00000015681	rnf17	99	53.056	ENSPMEG00000022432	rnf17	76	53.169	Poecilia_mexicana
ENSTNIG00000015681	rnf17	99	50.000	ENSPREG00000001414	rnf17	82	50.087	Poecilia_reticulata
ENSTNIG00000015681	rnf17	100	35.168	ENSPPYG00000005215	RNF17	74	35.168	Pongo_abelii
ENSTNIG00000015681	rnf17	66	34.689	ENSPCAG00000002665	RNF17	51	34.689	Procavia_capensis
ENSTNIG00000015681	rnf17	88	30.159	ENSPCOG00000020211	RNF17	66	32.710	Propithecus_coquereli
ENSTNIG00000015681	rnf17	96	45.588	ENSPVAG00000013021	RNF17	72	45.588	Pteropus_vampyrus
ENSTNIG00000015681	rnf17	99	44.901	ENSPNAG00000027505	rnf17	85	45.159	Pygocentrus_nattereri
ENSTNIG00000015681	rnf17	100	33.830	ENSRNOG00000008059	Rnf17	73	33.830	Rattus_norvegicus
ENSTNIG00000015681	rnf17	100	34.460	ENSRBIG00000027010	RNF17	78	34.460	Rhinopithecus_bieti
ENSTNIG00000015681	rnf17	100	35.004	ENSRROG00000022801	RNF17	98	36.061	Rhinopithecus_roxellana
ENSTNIG00000015681	rnf17	100	35.037	ENSSBOG00000021661	RNF17	98	35.909	Saimiri_boliviensis_boliviensis
ENSTNIG00000015681	rnf17	100	33.470	ENSSHAG00000005609	RNF17	73	33.470	Sarcophilus_harrisii
ENSTNIG00000015681	rnf17	99	41.738	ENSSFOG00015023037	rnf17	89	41.738	Scleropages_formosus
ENSTNIG00000015681	rnf17	92	56.136	ENSSMAG00000007429	rnf17	74	56.227	Scophthalmus_maximus
ENSTNIG00000015681	rnf17	92	58.694	ENSSDUG00000013530	rnf17	77	58.694	Seriola_dumerili
ENSTNIG00000015681	rnf17	92	58.602	ENSSLDG00000019577	rnf17	75	58.602	Seriola_lalandi_dorsalis
ENSTNIG00000015681	rnf17	87	33.962	ENSSARG00000003016	RNF17	62	33.962	Sorex_araneus
ENSTNIG00000015681	rnf17	99	32.838	ENSSPUG00000008917	RNF17	78	32.838	Sphenodon_punctatus
ENSTNIG00000015681	rnf17	90	55.545	ENSSPAG00000001925	rnf17	76	55.545	Stegastes_partitus
ENSTNIG00000015681	rnf17	100	33.939	ENSSSCG00000009572	RNF17	82	33.939	Sus_scrofa
ENSTNIG00000015681	rnf17	69	31.662	ENSTGUG00000011267	-	99	31.662	Taeniopygia_guttata
ENSTNIG00000015681	rnf17	99	69.773	ENSTRUG00000015498	rnf17	77	69.773	Takifugu_rubripes
ENSTNIG00000015681	rnf17	100	33.901	ENSTBEG00000000282	RNF17	66	33.901	Tupaia_belangeri
ENSTNIG00000015681	rnf17	100	31.492	ENSTTRG00000012698	RNF17	74	31.492	Tursiops_truncatus
ENSTNIG00000015681	rnf17	67	38.251	ENSUMAG00000013953	-	98	34.143	Ursus_maritimus
ENSTNIG00000015681	rnf17	79	50.000	ENSVPAG00000011388	RNF17	53	50.000	Vicugna_pacos
ENSTNIG00000015681	rnf17	100	34.189	ENSVVUG00000006226	RNF17	75	34.189	Vulpes_vulpes
ENSTNIG00000015681	rnf17	67	33.481	ENSXETG00000034020	RNF17	99	35.891	Xenopus_tropicalis
ENSTNIG00000015681	rnf17	93	51.721	ENSXCOG00000018295	rnf17	76	52.700	Xiphophorus_couchianus
ENSTNIG00000015681	rnf17	93	52.676	ENSXMAG00000014747	rnf17	77	52.739	Xiphophorus_maculatus