EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000015879 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1879 bases
Position: chr12:6418744-6420622
Accession: ZDB-GENE-060526-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000018964	Glu-tRNAGln	PF02686.15	9.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019192	-	913	-	ENSTNIP00000018964	207 (aa)	-	H3DEM1

Gene Model

Click here to download ENSTNIG00000015879's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015879	gatc	50	78.846	ENSACIG00000016853	gatc	74	78.846	Amphilophus_citrinellus
ENSTNIG00000015879	gatc	60	87.097	ENSAOCG00000014641	gatc	99	87.097	Amphiprion_ocellaris
ENSTNIG00000015879	gatc	86	70.056	ENSAPEG00000023411	gatc	91	70.056	Amphiprion_percula
ENSTNIG00000015879	gatc	95	62.755	ENSACLG00000026251	gatc	100	62.755	Astatotilapia_calliptera
ENSTNIG00000015879	gatc	64	75.758	ENSAMXG00000004252	gatc	60	74.265	Astyanax_mexicanus
ENSTNIG00000015879	gatc	57	38.136	WBGene00013433	Y66D12A.7	67	38.136	Caenorhabditis_elegans
ENSTNIG00000015879	gatc	77	46.626	ENSCJAG00000001183	-	94	42.708	Callithrix_jacchus
ENSTNIG00000015879	gatc	52	53.271	ENSCHIG00000019423	-	79	53.271	Capra_hircus
ENSTNIG00000015879	gatc	62	59.690	ENSCPBG00000011342	-	68	59.690	Chrysemys_picta_bellii
ENSTNIG00000015879	gatc	62	51.908	ENSCANG00000031071	GATC	87	51.908	Colobus_angolensis_palliatus
ENSTNIG00000015879	gatc	69	70.629	ENSCSEG00000007798	gatc	72	70.629	Cynoglossus_semilaevis
ENSTNIG00000015879	gatc	53	74.312	ENSCSEG00000016618	-	64	74.312	Cynoglossus_semilaevis
ENSTNIG00000015879	gatc	71	75.342	ENSCVAG00000004364	gatc	77	75.342	Cyprinodon_variegatus
ENSTNIG00000015879	gatc	67	69.784	ENSDARG00000056855	gatc	76	69.784	Danio_rerio
ENSTNIG00000015879	gatc	56	40.870	FBgn0064115	GatC	77	40.870	Drosophila_melanogaster
ENSTNIG00000015879	gatc	57	47.500	ENSETEG00000002604	-	79	47.500	Echinops_telfairi
ENSTNIG00000015879	gatc	86	53.261	ENSELUG00000012608	gatc	75	76.699	Esox_lucius
ENSTNIG00000015879	gatc	63	51.908	ENSFALG00000007564	-	82	51.908	Ficedula_albicollis
ENSTNIG00000015879	gatc	50	60.577	ENSFDAG00000018720	-	76	60.577	Fukomys_damarensis
ENSTNIG00000015879	gatc	74	72.549	ENSFHEG00000014992	GATC	82	72.549	Fundulus_heteroclitus
ENSTNIG00000015879	gatc	73	65.132	ENSGMOG00000008742	gatc	94	65.132	Gadus_morhua
ENSTNIG00000015879	gatc	50	59.615	ENSGALG00000007195	-	74	60.194	Gallus_gallus
ENSTNIG00000015879	gatc	59	76.423	ENSGAFG00000012801	gatc	78	76.423	Gambusia_affinis
ENSTNIG00000015879	gatc	91	63.298	ENSGACG00000008973	gatc	93	63.298	Gasterosteus_aculeatus
ENSTNIG00000015879	gatc	62	61.240	ENSGAGG00000016018	-	70	61.240	Gopherus_agassizii
ENSTNIG00000015879	gatc	95	63.776	ENSHBUG00000006827	gatc	100	63.776	Haplochromis_burtoni
ENSTNIG00000015879	gatc	52	58.333	ENSHGLG00000011394	GATC	79	58.333	Heterocephalus_glaber_female
ENSTNIG00000015879	gatc	52	56.481	ENSHGLG00100018850	-	78	56.481	Heterocephalus_glaber_male
ENSTNIG00000015879	gatc	62	78.125	ENSHCOG00000009209	gatc	100	78.125	Hippocampus_comes
ENSTNIG00000015879	gatc	62	76.744	ENSIPUG00000023072	gatc	60	76.923	Ictalurus_punctatus
ENSTNIG00000015879	gatc	62	75.969	ENSKMAG00000016476	gatc	99	75.969	Kryptolebias_marmoratus
ENSTNIG00000015879	gatc	74	69.481	ENSLBEG00000007603	gatc	85	69.481	Labrus_bergylta
ENSTNIG00000015879	gatc	61	59.524	ENSLACG00000018239	-	65	59.524	Latimeria_chalumnae
ENSTNIG00000015879	gatc	75	65.605	ENSLOCG00000004056	gatc	84	65.605	Lepisosteus_oculatus
ENSTNIG00000015879	gatc	65	51.799	ENSLAFG00000006384	-	88	51.799	Loxodonta_africana
ENSTNIG00000015879	gatc	71	77.397	ENSMAMG00000015851	gatc	80	77.397	Mastacembelus_armatus
ENSTNIG00000015879	gatc	95	62.755	ENSMZEG00005016072	gatc	100	62.755	Maylandia_zebra
ENSTNIG00000015879	gatc	50	62.136	ENSMGAG00000008733	-	98	61.538	Meleagris_gallopavo
ENSTNIG00000015879	gatc	60	50.000	ENSMOCG00000005051	Gatc	84	50.000	Microtus_ochrogaster
ENSTNIG00000015879	gatc	56	79.130	ENSMMOG00000017695	gatc	96	79.130	Mola_mola
ENSTNIG00000015879	gatc	95	63.776	ENSNBRG00000007810	gatc	100	63.776	Neolamprologus_brichardi
ENSTNIG00000015879	gatc	69	74.483	ENSONIG00000013444	gatc	100	74.483	Oreochromis_niloticus
ENSTNIG00000015879	gatc	58	80.165	ENSORLG00000007156	gatc	100	80.165	Oryzias_latipes
ENSTNIG00000015879	gatc	74	71.895	ENSORLG00020014991	gatc	81	71.895	Oryzias_latipes_hni
ENSTNIG00000015879	gatc	74	70.588	ENSORLG00015003450	gatc	81	70.588	Oryzias_latipes_hsok
ENSTNIG00000015879	gatc	70	74.306	ENSOMEG00000002280	gatc	77	74.306	Oryzias_melastigma
ENSTNIG00000015879	gatc	51	57.143	ENSOGAG00000003850	-	96	57.143	Otolemur_garnettii
ENSTNIG00000015879	gatc	62	51.538	ENSPTRG00000049887	GATC	87	51.538	Pan_troglodytes
ENSTNIG00000015879	gatc	64	70.455	ENSPKIG00000024856	gatc	68	70.455	Paramormyrops_kingsleyae
ENSTNIG00000015879	gatc	54	62.162	ENSPSIG00000011112	-	95	62.162	Pelodiscus_sinensis
ENSTNIG00000015879	gatc	60	79.839	ENSPMGG00000018829	gatc	79	79.839	Periophthalmus_magnuspinnatus
ENSTNIG00000015879	gatc	50	57.692	ENSPCIG00000025999	-	68	57.692	Phascolarctos_cinereus
ENSTNIG00000015879	gatc	69	76.761	ENSPFOG00000011603	gatc	77	76.761	Poecilia_formosa
ENSTNIG00000015879	gatc	69	76.056	ENSPLAG00000002471	gatc	77	76.056	Poecilia_latipinna
ENSTNIG00000015879	gatc	69	76.056	ENSPMEG00000020958	gatc	77	76.056	Poecilia_mexicana
ENSTNIG00000015879	gatc	53	86.239	ENSPREG00000022256	gatc	74	86.239	Poecilia_reticulata
ENSTNIG00000015879	gatc	68	49.650	ENSPPYG00000005030	GATC	95	49.650	Pongo_abelii
ENSTNIG00000015879	gatc	51	57.547	ENSPCAG00000013864	-	78	57.547	Procavia_capensis
ENSTNIG00000015879	gatc	61	49.219	ENSPCOG00000015558	-	89	49.219	Propithecus_coquereli
ENSTNIG00000015879	gatc	85	68.571	ENSPNYG00000016015	gatc	90	68.571	Pundamilia_nyererei
ENSTNIG00000015879	gatc	64	73.485	ENSPNAG00000001239	gatc	74	61.714	Pygocentrus_nattereri
ENSTNIG00000015879	gatc	62	51.145	ENSRBIG00000033363	GATC	87	51.145	Rhinopithecus_bieti
ENSTNIG00000015879	gatc	62	51.145	ENSRROG00000042802	GATC	87	51.145	Rhinopithecus_roxellana
ENSTNIG00000015879	gatc	59	72.951	ENSSFOG00015002508	gatc	70	74.775	Scleropages_formosus
ENSTNIG00000015879	gatc	79	71.779	ENSSMAG00000014280	gatc	87	71.779	Scophthalmus_maximus
ENSTNIG00000015879	gatc	81	69.461	ENSSDUG00000012206	gatc	84	69.461	Seriola_dumerili
ENSTNIG00000015879	gatc	81	70.060	ENSSLDG00000025159	gatc	83	70.060	Seriola_lalandi_dorsalis
ENSTNIG00000015879	gatc	60	54.545	ENSSPUG00000015693	-	81	54.545	Sphenodon_punctatus
ENSTNIG00000015879	gatc	87	68.889	ENSSPAG00000011860	gatc	92	68.889	Stegastes_partitus
ENSTNIG00000015879	gatc	50	63.462	ENSTGUG00000009561	-	96	63.462	Taeniopygia_guttata
ENSTNIG00000015879	gatc	86	82.486	ENSTRUG00000021596	gatc	89	82.486	Takifugu_rubripes
ENSTNIG00000015879	gatc	53	83.486	ENSXCOG00000017087	gatc	80	83.486	Xiphophorus_couchianus
ENSTNIG00000015879	gatc	69	75.352	ENSXMAG00000018267	gatc	77	75.352	Xiphophorus_maculatus