EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000015927 (Gene tree)
Gene ID: -
Gene Symbol: zgc:63587
Alias: -
Full Name: zgc:63587
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 9723 bases
Position: chr12:5932750-5942472
Accession: ZDB-GENE-040426-1175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019013	MMR_HSR1	PF01926.23	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019241	-	1041	-	ENSTNIP00000019013	346 (aa)	-	H3DES0

Gene Model

Click here to download ENSTNIG00000015927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000015927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000015927	zgc:63587	94	59.207	ENSTNIG00000003311	sept4a	89	59.207
ENSTNIG00000015927	zgc:63587	83	58.824	ENSTNIG00000011655	sept7b	67	58.824
ENSTNIG00000015927	zgc:63587	97	40.058	ENSTNIG00000015761	sept6	76	40.058
ENSTNIG00000015927	zgc:63587	94	60.340	ENSTNIG00000005815	SEPT4	92	60.340
ENSTNIG00000015927	zgc:63587	97	43.953	ENSTNIG00000018198	sept8a	74	43.953
ENSTNIG00000015927	zgc:63587	99	84.857	ENSTNIG00000007849	sept2	98	84.857
ENSTNIG00000015927	zgc:63587	83	63.140	ENSTNIG00000013578	sept5b	95	57.143
ENSTNIG00000015927	zgc:63587	77	47.407	ENSTNIG00000018624	sept9b	91	47.407
ENSTNIG00000015927	zgc:63587	84	46.959	ENSTNIG00000008939	SEPT8	88	46.959
ENSTNIG00000015927	zgc:63587	84	47.458	ENSTNIG00000004228	sept3	94	47.458
ENSTNIG00000015927	zgc:63587	84	48.639	ENSTNIG00000003729	sept9b	51	48.639
ENSTNIG00000015927	zgc:63587	94	57.849	ENSTNIG00000015926	sept5a	94	57.429
ENSTNIG00000015927	zgc:63587	85	47.651	ENSTNIG00000003858	sept9a	54	47.651

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000015927	zgc:63587	100	97.701	ENSAPOG00000021616	zgc:63587	100	97.701	Acanthochromis_polyacanthus
ENSTNIG00000015927	zgc:63587	89	97.411	ENSACIG00000006540	zgc:63587	100	97.411	Amphilophus_citrinellus
ENSTNIG00000015927	zgc:63587	100	96.839	ENSAOCG00000015026	zgc:63587	100	96.839	Amphiprion_ocellaris
ENSTNIG00000015927	zgc:63587	100	96.839	ENSAPEG00000017625	zgc:63587	100	96.839	Amphiprion_percula
ENSTNIG00000015927	zgc:63587	100	97.126	ENSATEG00000020519	zgc:63587	100	97.126	Anabas_testudineus
ENSTNIG00000015927	zgc:63587	99	92.174	ENSACAG00000000754	-	99	92.174	Anolis_carolinensis
ENSTNIG00000015927	zgc:63587	100	97.414	ENSACLG00000011287	zgc:63587	100	97.414	Astatotilapia_calliptera
ENSTNIG00000015927	zgc:63587	99	96.812	ENSAMXG00000006164	zgc:63587	95	96.812	Astyanax_mexicanus
ENSTNIG00000015927	zgc:63587	99	93.333	ENSCPBG00000010648	-	99	93.333	Chrysemys_picta_bellii
ENSTNIG00000015927	zgc:63587	100	97.126	ENSCSEG00000019626	zgc:63587	100	97.126	Cynoglossus_semilaevis
ENSTNIG00000015927	zgc:63587	100	97.126	ENSCVAG00000017959	zgc:63587	100	97.126	Cyprinodon_variegatus
ENSTNIG00000015927	zgc:63587	68	92.857	ENSDARG00000017140	zgc:63587	86	92.857	Danio_rerio
ENSTNIG00000015927	zgc:63587	100	97.126	ENSELUG00000009060	zgc:63587	100	97.126	Esox_lucius
ENSTNIG00000015927	zgc:63587	99	92.754	ENSFALG00000008010	-	99	92.754	Ficedula_albicollis
ENSTNIG00000015927	zgc:63587	100	97.414	ENSFHEG00000018583	zgc:63587	100	97.414	Fundulus_heteroclitus
ENSTNIG00000015927	zgc:63587	100	95.402	ENSGMOG00000013563	zgc:63587	100	95.402	Gadus_morhua
ENSTNIG00000015927	zgc:63587	99	93.333	ENSGALG00000001652	SEPT2L	99	93.333	Gallus_gallus
ENSTNIG00000015927	zgc:63587	100	97.701	ENSGAFG00000000805	zgc:63587	100	97.701	Gambusia_affinis
ENSTNIG00000015927	zgc:63587	100	96.264	ENSGACG00000005552	zgc:63587	100	96.264	Gasterosteus_aculeatus
ENSTNIG00000015927	zgc:63587	99	93.333	ENSGAGG00000014380	-	99	93.333	Gopherus_agassizii
ENSTNIG00000015927	zgc:63587	100	97.414	ENSHBUG00000013996	zgc:63587	100	97.414	Haplochromis_burtoni
ENSTNIG00000015927	zgc:63587	100	97.989	ENSHCOG00000005893	zgc:63587	100	97.989	Hippocampus_comes
ENSTNIG00000015927	zgc:63587	100	96.552	ENSKMAG00000003351	zgc:63587	100	96.552	Kryptolebias_marmoratus
ENSTNIG00000015927	zgc:63587	100	97.126	ENSLBEG00000025452	zgc:63587	100	97.126	Labrus_bergylta
ENSTNIG00000015927	zgc:63587	99	87.826	ENSLACG00000015335	zgc:63587	99	87.826	Latimeria_chalumnae
ENSTNIG00000015927	zgc:63587	99	96.232	ENSLOCG00000001793	zgc:63587	99	96.232	Lepisosteus_oculatus
ENSTNIG00000015927	zgc:63587	100	98.563	ENSMAMG00000014467	zgc:63587	100	98.563	Mastacembelus_armatus
ENSTNIG00000015927	zgc:63587	100	97.414	ENSMZEG00005009713	zgc:63587	100	97.414	Maylandia_zebra
ENSTNIG00000015927	zgc:63587	99	80.290	ENSMGAG00000001294	-	99	80.290	Meleagris_gallopavo
ENSTNIG00000015927	zgc:63587	92	98.125	ENSMMOG00000011692	zgc:63587	91	98.125	Mola_mola
ENSTNIG00000015927	zgc:63587	99	90.173	ENSMODG00000010193	-	94	90.173	Monodelphis_domestica
ENSTNIG00000015927	zgc:63587	89	97.411	ENSMALG00000020157	zgc:63587	100	97.411	Monopterus_albus
ENSTNIG00000015927	zgc:63587	100	97.414	ENSNBRG00000018582	-	100	97.414	Neolamprologus_brichardi
ENSTNIG00000015927	zgc:63587	100	97.989	ENSONIG00000014408	zgc:63587	100	97.989	Oreochromis_niloticus
ENSTNIG00000015927	zgc:63587	100	96.552	ENSORLG00000002669	zgc:63587	100	96.552	Oryzias_latipes
ENSTNIG00000015927	zgc:63587	100	96.552	ENSORLG00020005356	zgc:63587	100	96.552	Oryzias_latipes_hni
ENSTNIG00000015927	zgc:63587	100	96.552	ENSORLG00015015159	zgc:63587	100	96.552	Oryzias_latipes_hsok
ENSTNIG00000015927	zgc:63587	100	96.552	ENSOMEG00000017925	zgc:63587	100	96.552	Oryzias_melastigma
ENSTNIG00000015927	zgc:63587	99	96.522	ENSPKIG00000024604	zgc:63587	99	96.522	Paramormyrops_kingsleyae
ENSTNIG00000015927	zgc:63587	99	92.464	ENSPSIG00000002946	-	99	92.464	Pelodiscus_sinensis
ENSTNIG00000015927	zgc:63587	90	95.192	ENSPMGG00000018374	zgc:63587	100	95.192	Periophthalmus_magnuspinnatus
ENSTNIG00000015927	zgc:63587	100	91.379	ENSPCIG00000025491	-	99	91.379	Phascolarctos_cinereus
ENSTNIG00000015927	zgc:63587	100	97.414	ENSPFOG00000011730	zgc:63587	100	97.414	Poecilia_formosa
ENSTNIG00000015927	zgc:63587	100	97.414	ENSPLAG00000018604	zgc:63587	100	97.414	Poecilia_latipinna
ENSTNIG00000015927	zgc:63587	100	97.701	ENSPMEG00000004117	zgc:63587	100	97.701	Poecilia_mexicana
ENSTNIG00000015927	zgc:63587	100	97.414	ENSPREG00000011612	zgc:63587	100	97.414	Poecilia_reticulata
ENSTNIG00000015927	zgc:63587	100	97.126	ENSPNYG00000008409	zgc:63587	100	97.126	Pundamilia_nyererei
ENSTNIG00000015927	zgc:63587	99	95.652	ENSPNAG00000000463	zgc:63587	86	96.250	Pygocentrus_nattereri
ENSTNIG00000015927	zgc:63587	99	91.014	ENSSHAG00000011013	-	99	91.014	Sarcophilus_harrisii
ENSTNIG00000015927	zgc:63587	99	96.522	ENSSFOG00015014108	zgc:63587	99	96.522	Scleropages_formosus
ENSTNIG00000015927	zgc:63587	100	97.126	ENSSMAG00000006113	-	100	97.126	Scophthalmus_maximus
ENSTNIG00000015927	zgc:63587	98	97.941	ENSSDUG00000002763	zgc:63587	95	97.941	Seriola_dumerili
ENSTNIG00000015927	zgc:63587	100	98.276	ENSSLDG00000004826	zgc:63587	100	98.276	Seriola_lalandi_dorsalis
ENSTNIG00000015927	zgc:63587	99	92.464	ENSSPUG00000015358	-	99	92.464	Sphenodon_punctatus
ENSTNIG00000015927	zgc:63587	57	97.475	ENSSPAG00000000807	zgc:63587	63	97.475	Stegastes_partitus
ENSTNIG00000015927	zgc:63587	100	97.701	ENSSPAG00000015654	-	100	97.701	Stegastes_partitus
ENSTNIG00000015927	zgc:63587	99	92.464	ENSTGUG00000008445	-	99	92.464	Taeniopygia_guttata
ENSTNIG00000015927	zgc:63587	100	97.701	ENSTRUG00000016492	zgc:63587	100	97.701	Takifugu_rubripes
ENSTNIG00000015927	zgc:63587	99	93.623	ENSXETG00000018605	sept2-a	99	93.623	Xenopus_tropicalis
ENSTNIG00000015927	zgc:63587	96	96.096	ENSXCOG00000002678	zgc:63587	99	96.096	Xiphophorus_couchianus
ENSTNIG00000015927	zgc:63587	100	97.701	ENSXMAG00000014718	zgc:63587	100	97.701	Xiphophorus_maculatus