EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016047 (Gene tree)
Gene ID: -
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA decapping 3 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1924 bases
Position: chr13:10944547-10946470
Accession: ZDB-GENE-050522-287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019136	FDF	PF09532.10	8.7e-10	1	1
ENSTNIP00000019136	LSM14	PF12701.7	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019364	-	1437	-	ENSTNIP00000019136	478 (aa)	-	H3DF42

Gene Model

Click here to download ENSTNIG00000016047's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016047's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016047	edc3	100	68.164	ENSG00000179151	EDC3	100	77.778	Homo_sapiens
ENSTNIG00000016047	edc3	100	59.229	ENSAPOG00000008655	EDC3	100	59.229	Acanthochromis_polyacanthus
ENSTNIG00000016047	edc3	100	90.417	ENSAPOG00000010791	edc3	100	90.417	Acanthochromis_polyacanthus
ENSTNIG00000016047	edc3	100	68.297	ENSAMEG00000008963	EDC3	100	68.297	Ailuropoda_melanoleuca
ENSTNIG00000016047	edc3	100	89.583	ENSACIG00000017751	edc3	100	89.583	Amphilophus_citrinellus
ENSTNIG00000016047	edc3	100	64.271	ENSACIG00000005330	EDC3	100	64.271	Amphilophus_citrinellus
ENSTNIG00000016047	edc3	100	64.815	ENSAOCG00000009103	-	100	64.815	Amphiprion_ocellaris
ENSTNIG00000016047	edc3	100	90.417	ENSAOCG00000005431	edc3	100	90.417	Amphiprion_ocellaris
ENSTNIG00000016047	edc3	100	65.021	ENSAPEG00000007841	EDC3	100	65.021	Amphiprion_percula
ENSTNIG00000016047	edc3	100	90.417	ENSAPEG00000000968	edc3	100	90.417	Amphiprion_percula
ENSTNIG00000016047	edc3	100	66.667	ENSATEG00000004205	-	100	66.667	Anabas_testudineus
ENSTNIG00000016047	edc3	100	90.833	ENSATEG00000015505	edc3	100	90.833	Anabas_testudineus
ENSTNIG00000016047	edc3	88	69.027	ENSAPLG00000008957	EDC3	99	69.027	Anas_platyrhynchos
ENSTNIG00000016047	edc3	77	66.499	ENSACAG00000000460	-	100	66.499	Anolis_carolinensis
ENSTNIG00000016047	edc3	100	68.885	ENSANAG00000024078	EDC3	100	68.885	Aotus_nancymaae
ENSTNIG00000016047	edc3	100	66.322	ENSACLG00000018776	-	100	66.322	Astatotilapia_calliptera
ENSTNIG00000016047	edc3	100	88.542	ENSACLG00000007232	edc3	100	88.542	Astatotilapia_calliptera
ENSTNIG00000016047	edc3	100	79.447	ENSAMXG00000001589	edc3	100	79.447	Astyanax_mexicanus
ENSTNIG00000016047	edc3	100	68.493	ENSBTAG00000007308	EDC3	100	68.493	Bos_taurus
ENSTNIG00000016047	edc3	100	68.750	ENSCJAG00000017681	EDC3	100	68.750	Callithrix_jacchus
ENSTNIG00000016047	edc3	100	68.102	ENSCAFG00000017935	EDC3	100	68.102	Canis_familiaris
ENSTNIG00000016047	edc3	100	68.102	ENSCAFG00020003909	EDC3	100	68.102	Canis_lupus_dingo
ENSTNIG00000016047	edc3	100	68.689	ENSCHIG00000023658	EDC3	100	68.689	Capra_hircus
ENSTNIG00000016047	edc3	100	69.276	ENSTSYG00000004822	EDC3	100	69.276	Carlito_syrichta
ENSTNIG00000016047	edc3	100	69.080	ENSCPOG00000015595	EDC3	100	69.080	Cavia_porcellus
ENSTNIG00000016047	edc3	100	68.555	ENSCCAG00000021663	EDC3	100	68.555	Cebus_capucinus
ENSTNIG00000016047	edc3	100	68.689	ENSCATG00000037511	EDC3	100	68.689	Cercocebus_atys
ENSTNIG00000016047	edc3	100	68.885	ENSCLAG00000005700	EDC3	100	68.885	Chinchilla_lanigera
ENSTNIG00000016047	edc3	100	68.689	ENSCSAG00000014239	EDC3	100	68.689	Chlorocebus_sabaeus
ENSTNIG00000016047	edc3	100	69.472	ENSCPBG00000024239	EDC3	100	69.472	Chrysemys_picta_bellii
ENSTNIG00000016047	edc3	100	39.216	ENSCING00000022142	-	99	39.216	Ciona_intestinalis
ENSTNIG00000016047	edc3	100	68.689	ENSCANG00000028699	EDC3	100	68.689	Colobus_angolensis_palliatus
ENSTNIG00000016047	edc3	100	68.885	ENSCGRG00001013874	Edc3	100	68.885	Cricetulus_griseus_chok1gshd
ENSTNIG00000016047	edc3	100	68.885	ENSCGRG00000011885	Edc3	100	68.885	Cricetulus_griseus_crigri
ENSTNIG00000016047	edc3	99	88.518	ENSCSEG00000012996	edc3	99	88.518	Cynoglossus_semilaevis
ENSTNIG00000016047	edc3	100	87.708	ENSCVAG00000008023	edc3	100	87.708	Cyprinodon_variegatus
ENSTNIG00000016047	edc3	99	76.331	ENSDARG00000051931	edc3	99	76.331	Danio_rerio
ENSTNIG00000016047	edc3	100	59.846	ENSDNOG00000030661	EDC3	100	59.846	Dasypus_novemcinctus
ENSTNIG00000016047	edc3	68	77.914	ENSETEG00000002398	-	64	77.914	Echinops_telfairi
ENSTNIG00000016047	edc3	100	68.493	ENSEASG00005005071	EDC3	100	68.493	Equus_asinus_asinus
ENSTNIG00000016047	edc3	100	68.493	ENSECAG00000017994	EDC3	100	68.493	Equus_caballus
ENSTNIG00000016047	edc3	100	78.807	ENSELUG00000005794	edc3	100	78.807	Esox_lucius
ENSTNIG00000016047	edc3	100	70.539	ENSELUG00000007607	EDC3	100	70.539	Esox_lucius
ENSTNIG00000016047	edc3	100	68.155	ENSFCAG00000002014	EDC3	100	68.155	Felis_catus
ENSTNIG00000016047	edc3	98	68.600	ENSFALG00000004543	EDC3	96	68.600	Ficedula_albicollis
ENSTNIG00000016047	edc3	100	68.885	ENSFDAG00000012582	EDC3	100	68.885	Fukomys_damarensis
ENSTNIG00000016047	edc3	100	88.750	ENSFHEG00000009375	edc3	100	88.750	Fundulus_heteroclitus
ENSTNIG00000016047	edc3	100	86.128	ENSGMOG00000002715	edc3	100	86.128	Gadus_morhua
ENSTNIG00000016047	edc3	100	69.548	ENSGALG00000040181	EDC3	100	69.548	Gallus_gallus
ENSTNIG00000016047	edc3	100	86.875	ENSGAFG00000014433	edc3	100	86.875	Gambusia_affinis
ENSTNIG00000016047	edc3	99	60.234	ENSGACG00000014671	EDC3	99	60.234	Gasterosteus_aculeatus
ENSTNIG00000016047	edc3	100	87.500	ENSGACG00000009783	edc3	100	87.500	Gasterosteus_aculeatus
ENSTNIG00000016047	edc3	100	70.138	ENSGAGG00000023477	EDC3	100	70.138	Gopherus_agassizii
ENSTNIG00000016047	edc3	100	68.164	ENSGGOG00000003552	EDC3	100	68.164	Gorilla_gorilla
ENSTNIG00000016047	edc3	100	66.529	ENSHBUG00000020817	EDC3	100	66.529	Haplochromis_burtoni
ENSTNIG00000016047	edc3	100	88.542	ENSHBUG00000003635	edc3	100	88.542	Haplochromis_burtoni
ENSTNIG00000016047	edc3	100	87.137	ENSHCOG00000016834	edc3	100	87.137	Hippocampus_comes
ENSTNIG00000016047	edc3	99	77.800	ENSIPUG00000005695	edc3	100	77.800	Ictalurus_punctatus
ENSTNIG00000016047	edc3	100	68.885	ENSSTOG00000013936	EDC3	100	68.885	Ictidomys_tridecemlineatus
ENSTNIG00000016047	edc3	100	68.885	ENSJJAG00000008074	Edc3	100	68.885	Jaculus_jaculus
ENSTNIG00000016047	edc3	100	88.565	ENSKMAG00000001243	edc3	100	88.565	Kryptolebias_marmoratus
ENSTNIG00000016047	edc3	100	63.017	ENSKMAG00000001987	EDC3	100	63.017	Kryptolebias_marmoratus
ENSTNIG00000016047	edc3	100	89.792	ENSLBEG00000013435	edc3	99	89.792	Labrus_bergylta
ENSTNIG00000016047	edc3	100	64.503	ENSLBEG00000017984	EDC3	100	64.503	Labrus_bergylta
ENSTNIG00000016047	edc3	100	70.349	ENSLACG00000014149	EDC3	100	70.349	Latimeria_chalumnae
ENSTNIG00000016047	edc3	99	73.387	ENSLOCG00000014625	edc3	99	73.387	Lepisosteus_oculatus
ENSTNIG00000016047	edc3	100	68.824	ENSLAFG00000002992	EDC3	100	68.824	Loxodonta_africana
ENSTNIG00000016047	edc3	100	68.689	ENSMFAG00000043074	EDC3	100	68.689	Macaca_fascicularis
ENSTNIG00000016047	edc3	100	68.689	ENSMMUG00000011071	EDC3	100	68.689	Macaca_mulatta
ENSTNIG00000016047	edc3	100	68.689	ENSMNEG00000035316	EDC3	100	68.689	Macaca_nemestrina
ENSTNIG00000016047	edc3	100	68.689	ENSMLEG00000030372	EDC3	100	68.689	Mandrillus_leucophaeus
ENSTNIG00000016047	edc3	99	65.424	ENSMAMG00000005423	-	99	65.424	Mastacembelus_armatus
ENSTNIG00000016047	edc3	100	89.375	ENSMAMG00000000505	edc3	100	89.375	Mastacembelus_armatus
ENSTNIG00000016047	edc3	100	88.333	ENSMZEG00005004892	edc3	100	88.333	Maylandia_zebra
ENSTNIG00000016047	edc3	100	65.854	ENSMZEG00005005654	EDC3	100	65.854	Maylandia_zebra
ENSTNIG00000016047	edc3	100	69.352	ENSMGAG00000002617	EDC3	100	69.352	Meleagris_gallopavo
ENSTNIG00000016047	edc3	100	69.276	ENSMICG00000043190	EDC3	100	69.276	Microcebus_murinus
ENSTNIG00000016047	edc3	100	68.297	ENSMOCG00000016205	Edc3	100	68.297	Microtus_ochrogaster
ENSTNIG00000016047	edc3	99	91.858	ENSMMOG00000012278	edc3	99	91.858	Mola_mola
ENSTNIG00000016047	edc3	100	69.472	ENSMODG00000009442	EDC3	100	69.472	Monodelphis_domestica
ENSTNIG00000016047	edc3	100	89.792	ENSMALG00000008658	edc3	100	89.792	Monopterus_albus
ENSTNIG00000016047	edc3	100	67.515	MGP_CAROLIEiJ_G0032280	Edc3	100	74.627	Mus_caroli
ENSTNIG00000016047	edc3	100	67.515	ENSMUSG00000038957	Edc3	100	74.627	Mus_musculus
ENSTNIG00000016047	edc3	100	67.515	MGP_PahariEiJ_G0015146	Edc3	100	74.627	Mus_pahari
ENSTNIG00000016047	edc3	100	67.515	MGP_SPRETEiJ_G0033420	Edc3	100	74.627	Mus_spretus
ENSTNIG00000016047	edc3	100	68.155	ENSMPUG00000017293	EDC3	100	68.297	Mustela_putorius_furo
ENSTNIG00000016047	edc3	100	68.859	ENSMLUG00000016382	EDC3	100	68.859	Myotis_lucifugus
ENSTNIG00000016047	edc3	100	68.885	ENSNGAG00000010923	Edc3	100	68.885	Nannospalax_galili
ENSTNIG00000016047	edc3	100	88.125	ENSNBRG00000002434	edc3	100	88.125	Neolamprologus_brichardi
ENSTNIG00000016047	edc3	100	66.598	ENSNBRG00000007881	EDC3	100	66.598	Neolamprologus_brichardi
ENSTNIG00000016047	edc3	100	60.078	ENSNLEG00000014577	EDC3	100	60.078	Nomascus_leucogenys
ENSTNIG00000016047	edc3	100	69.548	ENSMEUG00000009077	EDC3	100	69.548	Notamacropus_eugenii
ENSTNIG00000016047	edc3	83	77.778	ENSOPRG00000009540	-	79	77.778	Ochotona_princeps
ENSTNIG00000016047	edc3	100	88.750	ENSONIG00000008434	edc3	100	88.750	Oreochromis_niloticus
ENSTNIG00000016047	edc3	100	62.934	ENSONIG00000002932	-	100	62.934	Oreochromis_niloticus
ENSTNIG00000016047	edc3	77	66.917	ENSOCUG00000017740	EDC3	86	66.917	Oryctolagus_cuniculus
ENSTNIG00000016047	edc3	100	63.430	ENSORLG00000014399	-	98	63.430	Oryzias_latipes
ENSTNIG00000016047	edc3	100	85.239	ENSORLG00000004883	edc3	100	85.239	Oryzias_latipes
ENSTNIG00000016047	edc3	100	63.430	ENSORLG00020019446	-	100	63.430	Oryzias_latipes_hni
ENSTNIG00000016047	edc3	100	85.655	ENSORLG00020012262	edc3	100	85.655	Oryzias_latipes_hni
ENSTNIG00000016047	edc3	100	63.223	ENSORLG00015017635	-	96	63.223	Oryzias_latipes_hsok
ENSTNIG00000016047	edc3	100	85.447	ENSORLG00015005634	edc3	100	85.447	Oryzias_latipes_hsok
ENSTNIG00000016047	edc3	100	85.833	ENSOMEG00000014026	edc3	100	85.833	Oryzias_melastigma
ENSTNIG00000016047	edc3	100	64.948	ENSOMEG00000017354	EDC3	100	64.948	Oryzias_melastigma
ENSTNIG00000016047	edc3	100	68.885	ENSOGAG00000014441	EDC3	100	68.885	Otolemur_garnettii
ENSTNIG00000016047	edc3	100	67.969	ENSOARG00000003476	EDC3	100	68.359	Ovis_aries
ENSTNIG00000016047	edc3	100	68.164	ENSPPAG00000040143	EDC3	100	68.164	Pan_paniscus
ENSTNIG00000016047	edc3	100	68.155	ENSPPRG00000006257	EDC3	100	68.155	Panthera_pardus
ENSTNIG00000016047	edc3	100	68.155	ENSPTIG00000017424	EDC3	100	68.155	Panthera_tigris_altaica
ENSTNIG00000016047	edc3	100	68.164	ENSPTRG00000007279	EDC3	100	68.164	Pan_troglodytes
ENSTNIG00000016047	edc3	100	68.689	ENSPANG00000015997	EDC3	100	68.689	Papio_anubis
ENSTNIG00000016047	edc3	100	74.850	ENSPKIG00000019810	EDC3	100	74.850	Paramormyrops_kingsleyae
ENSTNIG00000016047	edc3	100	74.016	ENSPKIG00000004416	edc3	100	74.016	Paramormyrops_kingsleyae
ENSTNIG00000016047	edc3	100	66.145	ENSPSIG00000008474	EDC3	100	66.145	Pelodiscus_sinensis
ENSTNIG00000016047	edc3	100	86.722	ENSPMGG00000007223	edc3	100	86.722	Periophthalmus_magnuspinnatus
ENSTNIG00000016047	edc3	100	68.689	ENSPEMG00000015260	Edc3	100	68.689	Peromyscus_maniculatus_bairdii
ENSTNIG00000016047	edc3	100	69.276	ENSPCIG00000006276	EDC3	70	69.591	Phascolarctos_cinereus
ENSTNIG00000016047	edc3	100	88.125	ENSPFOG00000012204	edc3	100	88.125	Poecilia_formosa
ENSTNIG00000016047	edc3	100	88.125	ENSPLAG00000014420	edc3	100	88.125	Poecilia_latipinna
ENSTNIG00000016047	edc3	100	88.125	ENSPMEG00000023289	edc3	100	88.125	Poecilia_mexicana
ENSTNIG00000016047	edc3	100	87.708	ENSPREG00000016022	edc3	100	87.708	Poecilia_reticulata
ENSTNIG00000016047	edc3	100	67.578	ENSPPYG00000006642	EDC3	100	67.578	Pongo_abelii
ENSTNIG00000016047	edc3	89	77.778	ENSPCAG00000002802	EDC3	84	77.778	Procavia_capensis
ENSTNIG00000016047	edc3	100	68.738	ENSPCOG00000013364	EDC3	100	68.738	Propithecus_coquereli
ENSTNIG00000016047	edc3	100	68.885	ENSPVAG00000014733	EDC3	100	68.750	Pteropus_vampyrus
ENSTNIG00000016047	edc3	100	88.542	ENSPNYG00000021797	edc3	100	88.542	Pundamilia_nyererei
ENSTNIG00000016047	edc3	100	66.529	ENSPNYG00000009669	EDC3	100	66.529	Pundamilia_nyererei
ENSTNIG00000016047	edc3	100	78.854	ENSPNAG00000019657	edc3	100	78.854	Pygocentrus_nattereri
ENSTNIG00000016047	edc3	99	67.520	ENSRNOG00000019579	Edc3	99	68.566	Rattus_norvegicus
ENSTNIG00000016047	edc3	100	68.689	ENSRBIG00000019488	EDC3	100	68.689	Rhinopithecus_bieti
ENSTNIG00000016047	edc3	100	68.689	ENSRROG00000034959	EDC3	100	68.689	Rhinopithecus_roxellana
ENSTNIG00000016047	edc3	100	68.555	ENSSBOG00000004896	EDC3	100	68.555	Saimiri_boliviensis_boliviensis
ENSTNIG00000016047	edc3	96	68.571	ENSSHAG00000015075	EDC3	95	68.571	Sarcophilus_harrisii
ENSTNIG00000016047	edc3	100	74.433	ENSSFOG00015002439	edc3	100	74.845	Scleropages_formosus
ENSTNIG00000016047	edc3	100	78.218	ENSSFOG00015016939	edc3	100	78.218	Scleropages_formosus
ENSTNIG00000016047	edc3	99	65.010	ENSSMAG00000010176	-	99	65.010	Scophthalmus_maximus
ENSTNIG00000016047	edc3	100	89.792	ENSSMAG00000010695	edc3	100	89.792	Scophthalmus_maximus
ENSTNIG00000016047	edc3	100	91.875	ENSSDUG00000021844	edc3	100	91.875	Seriola_dumerili
ENSTNIG00000016047	edc3	100	68.041	ENSSDUG00000007671	EDC3	100	68.041	Seriola_dumerili
ENSTNIG00000016047	edc3	100	92.083	ENSSLDG00000022046	edc3	100	92.083	Seriola_lalandi_dorsalis
ENSTNIG00000016047	edc3	79	77.823	ENSSARG00000003907	EDC3	80	77.823	Sorex_araneus
ENSTNIG00000016047	edc3	100	68.493	ENSSPUG00000008232	EDC3	100	68.493	Sphenodon_punctatus
ENSTNIG00000016047	edc3	100	90.208	ENSSPAG00000010009	edc3	100	90.208	Stegastes_partitus
ENSTNIG00000016047	edc3	100	65.361	ENSSPAG00000020327	EDC3	100	66.186	Stegastes_partitus
ENSTNIG00000016047	edc3	100	71.369	ENSSSCG00000001903	EDC3	100	71.369	Sus_scrofa
ENSTNIG00000016047	edc3	100	70.138	ENSTGUG00000004007	EDC3	100	70.138	Taeniopygia_guttata
ENSTNIG00000016047	edc3	100	95.000	ENSTRUG00000017078	edc3	100	95.000	Takifugu_rubripes
ENSTNIG00000016047	edc3	100	68.493	ENSTTRG00000007990	EDC3	100	68.493	Tursiops_truncatus
ENSTNIG00000016047	edc3	100	68.297	ENSUAMG00000026710	-	100	68.297	Ursus_americanus
ENSTNIG00000016047	edc3	100	68.297	ENSUMAG00000005006	EDC3	96	68.297	Ursus_maritimus
ENSTNIG00000016047	edc3	83	68.519	ENSVPAG00000003499	-	79	68.519	Vicugna_pacos
ENSTNIG00000016047	edc3	100	68.102	ENSVVUG00000018601	EDC3	100	68.102	Vulpes_vulpes
ENSTNIG00000016047	edc3	72	74.785	ENSXETG00000010622	edc3	99	76.218	Xenopus_tropicalis
ENSTNIG00000016047	edc3	100	87.708	ENSXMAG00000007377	edc3	100	87.708	Xiphophorus_maculatus