EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000016158 (Gene tree)
Gene ID: -
Gene Symbol: rab34b
Alias: si:dkey-220h13.7
Full Name: RAB34%2C member RAS oncogene family b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1678 bases
Position: chr7:7999681-8001358
Accession: ZDB-GENE-091118-61
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019249	MMR_HSR1	PF01926.23	4.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019478	-	777	-	ENSTNIP00000019249	258 (aa)	-	H3DFF5

Gene Model

Click here to download ENSTNIG00000016158's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016158's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000016158	rab34b	62	32.500	ENSTNIG00000011711	rab5c	71	32.500
ENSTNIG00000016158	rab34b	62	35.625	ENSTNIG00000008784	-	97	35.625
ENSTNIG00000016158	rab34b	62	35.220	ENSTNIG00000014859	rab12	82	32.353
ENSTNIG00000016158	rab34b	66	36.686	ENSTNIG00000009039	rab14	75	36.686
ENSTNIG00000016158	rab34b	66	32.941	ENSTNIG00000001043	si:ch211-247i17.1	83	32.941
ENSTNIG00000016158	rab34b	62	32.515	ENSTNIG00000014604	RAB7A	78	32.515
ENSTNIG00000016158	rab34b	68	32.386	ENSTNIG00000007882	rab18b	80	32.386
ENSTNIG00000016158	rab34b	62	37.805	ENSTNIG00000016831	RAB41	75	37.805
ENSTNIG00000016158	rab34b	51	43.609	ENSTNIG00000015000	zgc:101559	56	43.609
ENSTNIG00000016158	rab34b	62	39.521	ENSTNIG00000012343	-	71	39.521
ENSTNIG00000016158	rab34b	62	32.515	ENSTNIG00000011114	-	78	32.515
ENSTNIG00000016158	rab34b	56	37.931	ENSTNIG00000016575	rab23	65	39.744
ENSTNIG00000016158	rab34b	79	32.195	ENSTNIG00000009196	rab5aa	89	32.195
ENSTNIG00000016158	rab34b	64	35.542	ENSTNIG00000011300	si:dkey-16l2.16	78	35.542
ENSTNIG00000016158	rab34b	99	61.628	ENSTNIG00000016231	rab34a	99	61.628
ENSTNIG00000016158	rab34b	62	38.125	ENSTNIG00000018319	-	79	38.125
ENSTNIG00000016158	rab34b	73	31.771	ENSTNIG00000008717	rab18a	87	31.771
ENSTNIG00000016158	rab34b	64	34.940	ENSTNIG00000016414	rab15	77	34.940
ENSTNIG00000016158	rab34b	66	34.118	ENSTNIG00000004004	-	91	34.118
ENSTNIG00000016158	rab34b	65	30.000	ENSTNIG00000001956	RAB9A	80	30.000
ENSTNIG00000016158	rab34b	59	38.158	ENSTNIG00000004511	-	93	38.158
ENSTNIG00000016158	rab34b	50	38.462	ENSTNIG00000003472	rab2a	61	38.462
ENSTNIG00000016158	rab34b	60	38.994	ENSTNIG00000003679	-	73	38.994
ENSTNIG00000016158	rab34b	62	33.750	ENSTNIG00000018498	-	70	33.750
ENSTNIG00000016158	rab34b	60	36.364	ENSTNIG00000010122	rab33a	66	36.364
ENSTNIG00000016158	rab34b	67	36.207	ENSTNIG00000010125	rab33ba	72	36.207
ENSTNIG00000016158	rab34b	60	33.333	ENSTNIG00000017844	-	82	33.333
ENSTNIG00000016158	rab34b	64	37.126	ENSTNIG00000001260	RAB15	77	37.126
ENSTNIG00000016158	rab34b	62	37.888	ENSTNIG00000015257	rab6bb	76	37.888
ENSTNIG00000016158	rab34b	62	30.675	ENSTNIG00000001195	rab9a	79	30.675
ENSTNIG00000016158	rab34b	63	31.481	ENSTNIG00000001448	-	95	31.481
ENSTNIG00000016158	rab34b	62	31.481	ENSTNIG00000013137	ran	71	31.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016158	rab34b	86	85.202	ENSAPOG00000019147	rab34b	96	75.610	Acanthochromis_polyacanthus
ENSTNIG00000016158	rab34b	99	75.000	ENSACIG00000004859	rab34b	99	75.000	Amphilophus_citrinellus
ENSTNIG00000016158	rab34b	99	81.008	ENSAOCG00000007106	rab34b	94	81.008	Amphiprion_ocellaris
ENSTNIG00000016158	rab34b	88	84.649	ENSAPEG00000018607	rab34b	85	82.773	Amphiprion_percula
ENSTNIG00000016158	rab34b	93	79.253	ENSATEG00000006851	rab34b	94	79.253	Anabas_testudineus
ENSTNIG00000016158	rab34b	99	84.375	ENSACLG00000005733	rab34b	96	84.375	Astatotilapia_calliptera
ENSTNIG00000016158	rab34b	99	69.531	ENSAMXG00000006018	rab34b	99	69.531	Astyanax_mexicanus
ENSTNIG00000016158	rab34b	93	78.838	ENSCSEG00000018133	rab34b	96	78.838	Cynoglossus_semilaevis
ENSTNIG00000016158	rab34b	98	70.472	ENSDARG00000010977	rab34b	98	70.472	Danio_rerio
ENSTNIG00000016158	rab34b	99	78.125	ENSELUG00000005597	rab34b	99	78.125	Esox_lucius
ENSTNIG00000016158	rab34b	99	80.000	ENSFHEG00000004532	rab34b	100	80.000	Fundulus_heteroclitus
ENSTNIG00000016158	rab34b	80	79.710	ENSGMOG00000007140	rab34b	99	79.710	Gadus_morhua
ENSTNIG00000016158	rab34b	99	82.490	ENSGACG00000020514	rab34b	100	82.490	Gasterosteus_aculeatus
ENSTNIG00000016158	rab34b	98	69.685	ENSIPUG00000024531	rab34	98	69.685	Ictalurus_punctatus
ENSTNIG00000016158	rab34b	99	80.392	ENSKMAG00000019341	rab34b	100	80.392	Kryptolebias_marmoratus
ENSTNIG00000016158	rab34b	99	81.961	ENSLBEG00000027819	rab34b	100	81.961	Labrus_bergylta
ENSTNIG00000016158	rab34b	99	81.961	ENSMAMG00000020214	rab34b	100	81.961	Mastacembelus_armatus
ENSTNIG00000016158	rab34b	100	78.295	ENSMMOG00000010936	rab34b	87	78.295	Mola_mola
ENSTNIG00000016158	rab34b	92	82.353	ENSMALG00000018499	rab34b	89	82.353	Monopterus_albus
ENSTNIG00000016158	rab34b	99	84.314	ENSONIG00000005519	rab34b	100	84.314	Oreochromis_niloticus
ENSTNIG00000016158	rab34b	99	80.469	ENSORLG00000003119	rab34b	92	80.469	Oryzias_latipes
ENSTNIG00000016158	rab34b	99	80.469	ENSORLG00020016139	rab34b	92	80.469	Oryzias_latipes_hni
ENSTNIG00000016158	rab34b	99	80.469	ENSORLG00015000584	rab34b	92	80.469	Oryzias_latipes_hsok
ENSTNIG00000016158	rab34b	99	81.569	ENSOMEG00000010334	rab34b	98	81.148	Oryzias_melastigma
ENSTNIG00000016158	rab34b	99	66.537	ENSPKIG00000013326	rab34b	99	66.537	Paramormyrops_kingsleyae
ENSTNIG00000016158	rab34b	99	80.078	ENSPMGG00000021697	rab34b	99	80.078	Periophthalmus_magnuspinnatus
ENSTNIG00000016158	rab34b	99	80.859	ENSPFOG00000011444	rab34b	100	80.859	Poecilia_formosa
ENSTNIG00000016158	rab34b	99	80.784	ENSPLAG00000005074	rab34b	100	80.784	Poecilia_latipinna
ENSTNIG00000016158	rab34b	99	80.784	ENSPMEG00000013297	rab34b	100	80.784	Poecilia_mexicana
ENSTNIG00000016158	rab34b	99	80.392	ENSPREG00000009813	rab34b	100	80.392	Poecilia_reticulata
ENSTNIG00000016158	rab34b	99	76.172	ENSPNYG00000017153	rab34b	99	88.701	Pundamilia_nyererei
ENSTNIG00000016158	rab34b	92	70.886	ENSPNAG00000015040	rab34b	99	70.886	Pygocentrus_nattereri
ENSTNIG00000016158	rab34b	99	67.442	ENSSFOG00015005188	rab34	99	67.442	Scleropages_formosus
ENSTNIG00000016158	rab34b	92	82.700	ENSSMAG00000019926	rab34b	100	79.747	Scophthalmus_maximus
ENSTNIG00000016158	rab34b	99	84.766	ENSSDUG00000016760	rab34b	80	84.766	Seriola_dumerili
ENSTNIG00000016158	rab34b	72	88.770	ENSSLDG00000014812	rab34b	91	88.770	Seriola_lalandi_dorsalis
ENSTNIG00000016158	rab34b	99	81.176	ENSSPAG00000002801	rab34b	100	81.176	Stegastes_partitus
ENSTNIG00000016158	rab34b	94	89.669	ENSTRUG00000014481	rab34b	98	89.669	Takifugu_rubripes