EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016196 (Gene tree)
Gene ID: -
Gene Symbol: tsr1
Alias: fc52b09|wu:fc52b09|zgc:123319
Full Name: TSR1%2C 20S rRNA accumulation%2C homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4722 bases
Position: chr16:3248788-3253509
Accession: ZDB-GENE-030131-3762
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019288	AARP2CN	PF08142.12	1e-22	1	1
ENSTNIP00000000520	AARP2CN	PF08142.12	1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019517	-	2412	-	ENSTNIP00000019288	803 (aa)	-	H3DFJ4
ENSTNIT00000002475	-	2445	-	ENSTNIP00000000520	814 (aa)	-	H3BX07

Gene Model

Click here to download ENSTNIG00000016196's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016196's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016196	tsr1	98	56.824	ENSG00000167721	TSR1	98	56.824	Homo_sapiens
ENSTNIG00000016196	tsr1	100	84.439	ENSAPOG00000020891	tsr1	99	84.318	Acanthochromis_polyacanthus
ENSTNIG00000016196	tsr1	99	54.126	ENSAMEG00000007599	TSR1	99	54.324	Ailuropoda_melanoleuca
ENSTNIG00000016196	tsr1	100	82.861	ENSACIG00000007090	tsr1	99	82.512	Amphilophus_citrinellus
ENSTNIG00000016196	tsr1	100	84.058	ENSAOCG00000023284	tsr1	99	84.848	Amphiprion_ocellaris
ENSTNIG00000016196	tsr1	94	83.033	ENSAPEG00000008452	tsr1	100	83.484	Amphiprion_percula
ENSTNIG00000016196	tsr1	100	83.453	ENSATEG00000021961	tsr1	99	83.614	Anabas_testudineus
ENSTNIG00000016196	tsr1	92	58.566	ENSAPLG00000013422	TSR1	100	58.433	Anas_platyrhynchos
ENSTNIG00000016196	tsr1	71	48.896	ENSACAG00000000859	TSR1	92	49.406	Anolis_carolinensis
ENSTNIG00000016196	tsr1	98	56.841	ENSANAG00000031071	TSR1	98	56.592	Aotus_nancymaae
ENSTNIG00000016196	tsr1	100	83.172	ENSACLG00000007595	tsr1	99	82.482	Astatotilapia_calliptera
ENSTNIG00000016196	tsr1	51	74.757	ENSAMXG00000008470	tsr1	87	74.696	Astyanax_mexicanus
ENSTNIG00000016196	tsr1	99	57.021	ENSBTAG00000004225	TSR1	99	57.143	Bos_taurus
ENSTNIG00000016196	tsr1	67	30.453	WBGene00022021	Y61A9LA.10	51	30.165	Caenorhabditis_elegans
ENSTNIG00000016196	tsr1	97	39.649	WBGene00006497	tag-151	96	39.497	Caenorhabditis_elegans
ENSTNIG00000016196	tsr1	98	56.015	ENSCJAG00000012456	TSR1	98	55.764	Callithrix_jacchus
ENSTNIG00000016196	tsr1	90	53.784	ENSCAFG00000019273	-	100	58.084	Canis_familiaris
ENSTNIG00000016196	tsr1	99	55.746	ENSCAFG00000002106	-	99	55.814	Canis_familiaris
ENSTNIG00000016196	tsr1	99	55.501	ENSCAFG00020009728	TSR1	99	55.569	Canis_lupus_dingo
ENSTNIG00000016196	tsr1	99	57.196	ENSCHIG00000023935	TSR1	99	57.565	Capra_hircus
ENSTNIG00000016196	tsr1	99	57.266	ENSTSYG00000005468	TSR1	99	57.020	Carlito_syrichta
ENSTNIG00000016196	tsr1	93	55.644	ENSCPOG00000014833	TSR1	99	55.644	Cavia_porcellus
ENSTNIG00000016196	tsr1	93	55.644	ENSCCAG00000028962	TSR1	98	54.980	Cebus_capucinus
ENSTNIG00000016196	tsr1	99	56.489	ENSCATG00000044262	TSR1	99	56.436	Cercocebus_atys
ENSTNIG00000016196	tsr1	99	55.897	ENSCLAG00000005567	TSR1	99	55.857	Chinchilla_lanigera
ENSTNIG00000016196	tsr1	99	56.613	ENSCSAG00000013788	TSR1	99	56.559	Chlorocebus_sabaeus
ENSTNIG00000016196	tsr1	99	56.613	ENSCPBG00000020363	TSR1	97	56.495	Chrysemys_picta_bellii
ENSTNIG00000016196	tsr1	97	45.865	ENSCING00000020658	-	99	45.363	Ciona_intestinalis
ENSTNIG00000016196	tsr1	97	44.720	ENSCSAVG00000001875	-	100	45.031	Ciona_savignyi
ENSTNIG00000016196	tsr1	99	53.933	ENSCANG00000033056	TSR1	99	54.047	Colobus_angolensis_palliatus
ENSTNIG00000016196	tsr1	99	55.025	ENSCGRG00001023942	Tsr1	99	55.025	Cricetulus_griseus_chok1gshd
ENSTNIG00000016196	tsr1	99	53.284	ENSCGRG00000013015	Tsr1	99	52.534	Cricetulus_griseus_crigri
ENSTNIG00000016196	tsr1	100	77.764	ENSCSEG00000013009	tsr1	99	78.007	Cynoglossus_semilaevis
ENSTNIG00000016196	tsr1	100	81.265	ENSCVAG00000000506	tsr1	99	80.918	Cyprinodon_variegatus
ENSTNIG00000016196	tsr1	100	74.909	ENSDARG00000007744	tsr1	99	75.396	Danio_rerio
ENSTNIG00000016196	tsr1	99	57.283	ENSDNOG00000004715	TSR1	99	58.806	Dasypus_novemcinctus
ENSTNIG00000016196	tsr1	97	50.319	ENSDORG00000023234	-	99	49.808	Dipodomys_ordii
ENSTNIG00000016196	tsr1	99	56.634	ENSDORG00000016371	-	99	56.166	Dipodomys_ordii
ENSTNIG00000016196	tsr1	97	43.580	FBgn0037073	Tsr1	96	43.210	Drosophila_melanogaster
ENSTNIG00000016196	tsr1	89	68.197	ENSETEG00000017534	TSR1	88	68.197	Echinops_telfairi
ENSTNIG00000016196	tsr1	96	52.859	ENSEBUG00000013731	TSR1	98	51.970	Eptatretus_burgeri
ENSTNIG00000016196	tsr1	99	56.950	ENSEASG00005009302	TSR1	97	56.740	Equus_asinus_asinus
ENSTNIG00000016196	tsr1	99	56.951	ENSECAG00000009114	TSR1	99	56.740	Equus_caballus
ENSTNIG00000016196	tsr1	100	74.306	ENSELUG00000020984	tsr1	95	74.155	Esox_lucius
ENSTNIG00000016196	tsr1	99	55.802	ENSFCAG00000006313	TSR1	99	55.678	Felis_catus
ENSTNIG00000016196	tsr1	99	56.970	ENSFALG00000006532	TSR1	99	57.005	Ficedula_albicollis
ENSTNIG00000016196	tsr1	99	55.868	ENSFDAG00000006038	TSR1	99	55.802	Fukomys_damarensis
ENSTNIG00000016196	tsr1	100	80.529	ENSFHEG00000003626	tsr1	99	80.769	Fundulus_heteroclitus
ENSTNIG00000016196	tsr1	100	73.951	ENSGMOG00000010336	tsr1	99	73.333	Gadus_morhua
ENSTNIG00000016196	tsr1	100	80.947	ENSGAFG00000012993	tsr1	99	81.675	Gambusia_affinis
ENSTNIG00000016196	tsr1	100	81.081	ENSGACG00000010843	tsr1	99	81.081	Gasterosteus_aculeatus
ENSTNIG00000016196	tsr1	99	57.143	ENSGAGG00000025619	-	99	56.158	Gopherus_agassizii
ENSTNIG00000016196	tsr1	98	57.072	ENSGGOG00000001704	TSR1	98	56.948	Gorilla_gorilla
ENSTNIG00000016196	tsr1	100	82.992	ENSHBUG00000017904	tsr1	100	81.677	Haplochromis_burtoni
ENSTNIG00000016196	tsr1	99	56.029	ENSHGLG00000012806	-	99	55.854	Heterocephalus_glaber_female
ENSTNIG00000016196	tsr1	97	49.872	ENSHGLG00000015688	-	98	49.616	Heterocephalus_glaber_female
ENSTNIG00000016196	tsr1	99	56.029	ENSHGLG00100015392	TSR1	99	55.854	Heterocephalus_glaber_male
ENSTNIG00000016196	tsr1	100	81.320	ENSHCOG00000001432	tsr1	99	80.697	Hippocampus_comes
ENSTNIG00000016196	tsr1	100	73.501	ENSIPUG00000004618	tsr1	99	73.141	Ictalurus_punctatus
ENSTNIG00000016196	tsr1	99	55.843	ENSSTOG00000011819	TSR1	99	56.458	Ictidomys_tridecemlineatus
ENSTNIG00000016196	tsr1	91	54.743	ENSJJAG00000019505	Tsr1	95	54.003	Jaculus_jaculus
ENSTNIG00000016196	tsr1	100	82.367	ENSKMAG00000005763	tsr1	99	82.488	Kryptolebias_marmoratus
ENSTNIG00000016196	tsr1	100	83.053	ENSLBEG00000021823	tsr1	99	82.850	Labrus_bergylta
ENSTNIG00000016196	tsr1	99	57.920	ENSLACG00000002197	TSR1	99	57.022	Latimeria_chalumnae
ENSTNIG00000016196	tsr1	91	79.412	ENSLOCG00000006491	TSR1	98	79.412	Lepisosteus_oculatus
ENSTNIG00000016196	tsr1	99	56.737	ENSMFAG00000021330	TSR1	99	56.683	Macaca_fascicularis
ENSTNIG00000016196	tsr1	99	56.613	ENSMMUG00000017519	TSR1	99	56.559	Macaca_mulatta
ENSTNIG00000016196	tsr1	99	56.737	ENSMNEG00000031382	TSR1	99	56.683	Macaca_nemestrina
ENSTNIG00000016196	tsr1	99	56.366	ENSMLEG00000036733	TSR1	99	56.312	Mandrillus_leucophaeus
ENSTNIG00000016196	tsr1	100	83.154	ENSMAMG00000017918	tsr1	99	82.692	Mastacembelus_armatus
ENSTNIG00000016196	tsr1	100	82.709	ENSMZEG00005007477	tsr1	99	82.225	Maylandia_zebra
ENSTNIG00000016196	tsr1	99	57.195	ENSMGAG00000005576	TSR1	99	57.195	Meleagris_gallopavo
ENSTNIG00000016196	tsr1	99	57.407	ENSMICG00000012943	TSR1	99	57.160	Microcebus_murinus
ENSTNIG00000016196	tsr1	99	55.936	ENSMOCG00000022764	Tsr1	99	55.240	Microtus_ochrogaster
ENSTNIG00000016196	tsr1	100	85.557	ENSMMOG00000014280	tsr1	99	85.312	Mola_mola
ENSTNIG00000016196	tsr1	99	58.313	ENSMODG00000010658	TSR1	99	57.797	Monodelphis_domestica
ENSTNIG00000016196	tsr1	100	82.671	ENSMALG00000011681	tsr1	99	82.950	Monopterus_albus
ENSTNIG00000016196	tsr1	99	55.240	MGP_CAROLIEiJ_G0016727	Tsr1	99	54.994	Mus_caroli
ENSTNIG00000016196	tsr1	99	55.734	ENSMUSG00000038335	Tsr1	99	55.487	Mus_musculus
ENSTNIG00000016196	tsr1	99	55.857	MGP_PahariEiJ_G0017864	Tsr1	99	55.610	Mus_pahari
ENSTNIG00000016196	tsr1	99	55.734	MGP_SPRETEiJ_G0017570	Tsr1	99	55.487	Mus_spretus
ENSTNIG00000016196	tsr1	81	59.063	ENSMPUG00000013000	TSR1	100	59.063	Mustela_putorius_furo
ENSTNIG00000016196	tsr1	98	57.836	ENSMLUG00000003505	TSR1	99	57.602	Myotis_lucifugus
ENSTNIG00000016196	tsr1	100	82.169	ENSNBRG00000020728	tsr1	99	82.324	Neolamprologus_brichardi
ENSTNIG00000016196	tsr1	98	54.353	ENSNLEG00000017184	TSR1	98	54.500	Nomascus_leucogenys
ENSTNIG00000016196	tsr1	99	53.514	ENSMEUG00000015828	TSR1	99	53.637	Notamacropus_eugenii
ENSTNIG00000016196	tsr1	100	83.981	ENSONIG00000013131	tsr1	99	83.212	Oreochromis_niloticus
ENSTNIG00000016196	tsr1	96	55.344	ENSOANG00000008637	TSR1	100	54.406	Ornithorhynchus_anatinus
ENSTNIG00000016196	tsr1	98	57.373	ENSOCUG00000014256	TSR1	98	57.426	Oryctolagus_cuniculus
ENSTNIG00000016196	tsr1	100	80.820	ENSORLG00000004926	tsr1	99	80.606	Oryzias_latipes
ENSTNIG00000016196	tsr1	100	80.676	ENSORLG00020008792	tsr1	99	80.461	Oryzias_latipes_hni
ENSTNIG00000016196	tsr1	100	80.820	ENSORLG00015013838	tsr1	99	80.606	Oryzias_latipes_hsok
ENSTNIG00000016196	tsr1	100	80.820	ENSOMEG00000004830	tsr1	99	80.727	Oryzias_melastigma
ENSTNIG00000016196	tsr1	99	56.295	ENSOGAG00000004492	TSR1	99	56.395	Otolemur_garnettii
ENSTNIG00000016196	tsr1	99	57.143	ENSOARG00000015437	TSR1	97	57.688	Ovis_aries
ENSTNIG00000016196	tsr1	98	56.948	ENSPPAG00000036355	TSR1	98	56.948	Pan_paniscus
ENSTNIG00000016196	tsr1	99	55.556	ENSPPRG00000015519	-	99	55.311	Panthera_pardus
ENSTNIG00000016196	tsr1	99	55.556	ENSPTIG00000010608	TSR1	99	55.311	Panthera_tigris_altaica
ENSTNIG00000016196	tsr1	98	56.948	ENSPTRG00000008547	TSR1	98	56.948	Pan_troglodytes
ENSTNIG00000016196	tsr1	99	54.141	ENSPANG00000024463	TSR1	99	54.151	Papio_anubis
ENSTNIG00000016196	tsr1	100	74.069	ENSPKIG00000013972	tsr1	99	73.697	Paramormyrops_kingsleyae
ENSTNIG00000016196	tsr1	87	57.083	ENSPSIG00000018258	TSR1	99	57.223	Pelodiscus_sinensis
ENSTNIG00000016196	tsr1	99	80.764	ENSPMGG00000011577	tsr1	99	80.395	Periophthalmus_magnuspinnatus
ENSTNIG00000016196	tsr1	99	54.945	ENSPEMG00000018033	Tsr1	99	54.994	Peromyscus_maniculatus_bairdii
ENSTNIG00000016196	tsr1	99	57.475	ENSPCIG00000009357	TSR1	97	57.546	Phascolarctos_cinereus
ENSTNIG00000016196	tsr1	100	81.563	ENSPFOG00000004483	TSR1	99	82.051	Poecilia_formosa
ENSTNIG00000016196	tsr1	100	81.592	ENSPLAG00000022320	tsr1	99	82.090	Poecilia_latipinna
ENSTNIG00000016196	tsr1	100	81.032	ENSPMEG00000004577	tsr1	99	81.544	Poecilia_mexicana
ENSTNIG00000016196	tsr1	97	81.088	ENSPREG00000010354	tsr1	96	80.294	Poecilia_reticulata
ENSTNIG00000016196	tsr1	98	51.358	ENSPPYG00000007792	TSR1	98	51.174	Pongo_abelii
ENSTNIG00000016196	tsr1	53	65.116	ENSPCAG00000012973	-	69	65.000	Procavia_capensis
ENSTNIG00000016196	tsr1	99	56.242	ENSPCOG00000017928	TSR1	99	56.613	Propithecus_coquereli
ENSTNIG00000016196	tsr1	99	56.281	ENSPVAG00000002162	TSR1	99	56.281	Pteropus_vampyrus
ENSTNIG00000016196	tsr1	100	83.172	ENSPNYG00000016163	tsr1	99	82.482	Pundamilia_nyererei
ENSTNIG00000016196	tsr1	100	73.558	ENSPNAG00000008659	tsr1	99	73.558	Pygocentrus_nattereri
ENSTNIG00000016196	tsr1	99	54.969	ENSRNOG00000002980	Tsr1	99	55.049	Rattus_norvegicus
ENSTNIG00000016196	tsr1	99	56.426	ENSRBIG00000040016	TSR1	99	56.426	Rhinopithecus_bieti
ENSTNIG00000016196	tsr1	99	56.548	ENSRROG00000030361	TSR1	99	56.548	Rhinopithecus_roxellana
ENSTNIG00000016196	tsr1	96	30.653	YDL060W	-	98	30.730	Saccharomyces_cerevisiae
ENSTNIG00000016196	tsr1	98	56.700	ENSSBOG00000020785	TSR1	98	56.592	Saimiri_boliviensis_boliviensis
ENSTNIG00000016196	tsr1	99	57.509	ENSSHAG00000011394	TSR1	99	57.631	Sarcophilus_harrisii
ENSTNIG00000016196	tsr1	100	73.966	ENSSFOG00015005455	tsr1	99	73.594	Scleropages_formosus
ENSTNIG00000016196	tsr1	100	82.104	ENSSMAG00000009504	tsr1	99	82.467	Scophthalmus_maximus
ENSTNIG00000016196	tsr1	100	83.774	ENSSDUG00000012074	tsr1	99	85.024	Seriola_dumerili
ENSTNIG00000016196	tsr1	100	83.976	ENSSLDG00000002031	tsr1	99	85.230	Seriola_lalandi_dorsalis
ENSTNIG00000016196	tsr1	93	55.777	ENSSARG00000000759	TSR1	93	55.777	Sorex_araneus
ENSTNIG00000016196	tsr1	99	57.212	ENSSPUG00000007042	TSR1	99	57.125	Sphenodon_punctatus
ENSTNIG00000016196	tsr1	100	85.096	ENSSPAG00000021951	tsr1	99	85.216	Stegastes_partitus
ENSTNIG00000016196	tsr1	99	57.509	ENSSSCG00000038534	TSR1	99	57.565	Sus_scrofa
ENSTNIG00000016196	tsr1	90	59.459	ENSTGUG00000005883	TSR1	100	59.517	Taeniopygia_guttata
ENSTNIG00000016196	tsr1	100	91.209	ENSTRUG00000004665	tsr1	99	91.209	Takifugu_rubripes
ENSTNIG00000016196	tsr1	66	70.769	ENSTBEG00000015275	-	66	70.769	Tupaia_belangeri
ENSTNIG00000016196	tsr1	99	57.230	ENSTTRG00000001177	TSR1	99	57.442	Tursiops_truncatus
ENSTNIG00000016196	tsr1	99	55.006	ENSUAMG00000025160	TSR1	99	55.130	Ursus_americanus
ENSTNIG00000016196	tsr1	96	55.045	ENSUMAG00000009294	TSR1	98	55.172	Ursus_maritimus
ENSTNIG00000016196	tsr1	84	51.234	ENSVPAG00000000228	TSR1	99	50.801	Vicugna_pacos
ENSTNIG00000016196	tsr1	99	55.623	ENSVVUG00000021767	TSR1	99	55.692	Vulpes_vulpes
ENSTNIG00000016196	tsr1	100	53.197	ENSXETG00000023797	tsr1	100	52.810	Xenopus_tropicalis
ENSTNIG00000016196	tsr1	100	81.885	ENSXCOG00000009635	tsr1	99	81.796	Xiphophorus_couchianus
ENSTNIG00000016196	tsr1	100	81.189	ENSXMAG00000001397	tsr1	96	81.189	Xiphophorus_maculatus