EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000016411 (Gene tree)
Gene ID: -
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 5007 bases
Position: chr14:4724379-4729385
Accession: ZDB-GENE-040718-354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019508	RRM_1	PF00076.22	2.3e-31	1	2
ENSTNIP00000019508	RRM_1	PF00076.22	2.3e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019738	-	831	-	ENSTNIP00000019508	277 (aa)	-	H3DG64

Gene Model

Click here to download ENSTNIG00000016411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000016411	srsf5b	62	39.888	ENSTNIG00000000697	srsf9	66	38.202
ENSTNIG00000016411	srsf5b	60	40.000	ENSTNIG00000009993	-	66	42.105
ENSTNIG00000016411	srsf5b	64	64.444	ENSTNIG00000001692	srsf6a	55	64.444
ENSTNIG00000016411	srsf5b	60	44.444	ENSTNIG00000016223	srsf1a	64	43.575

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016411	srsf5b	66	84.153	ENSG00000100650	SRSF5	98	80.159	Homo_sapiens
ENSTNIG00000016411	srsf5b	95	75.352	ENSAPOG00000008642	srsf5b	92	84.815	Acanthochromis_polyacanthus
ENSTNIG00000016411	srsf5b	66	84.153	ENSAMEG00000014574	SRSF5	67	83.333	Ailuropoda_melanoleuca
ENSTNIG00000016411	srsf5b	95	83.333	ENSACIG00000010742	srsf5b	94	80.072	Amphilophus_citrinellus
ENSTNIG00000016411	srsf5b	95	75.000	ENSAOCG00000005719	srsf5b	92	84.444	Amphiprion_ocellaris
ENSTNIG00000016411	srsf5b	95	75.000	ENSAPEG00000007830	srsf5b	92	84.444	Amphiprion_percula
ENSTNIG00000016411	srsf5b	95	81.343	ENSATEG00000019112	srsf5b	92	83.643	Anabas_testudineus
ENSTNIG00000016411	srsf5b	64	83.051	ENSAPLG00000014681	SRSF5	100	63.669	Anas_platyrhynchos
ENSTNIG00000016411	srsf5b	66	83.060	ENSACAG00000005143	SRSF5	100	63.669	Anolis_carolinensis
ENSTNIG00000016411	srsf5b	66	84.153	ENSANAG00000027977	-	88	80.159	Aotus_nancymaae
ENSTNIG00000016411	srsf5b	95	84.015	ENSACLG00000026424	srsf5b	94	81.455	Astatotilapia_calliptera
ENSTNIG00000016411	srsf5b	87	75.188	ENSAMXG00000011932	srsf5b	84	84.127	Astyanax_mexicanus
ENSTNIG00000016411	srsf5b	66	84.153	ENSBTAG00000011596	SRSF5	67	83.333	Bos_taurus
ENSTNIG00000016411	srsf5b	66	84.153	ENSCJAG00000014884	SRSF5	100	70.819	Callithrix_jacchus
ENSTNIG00000016411	srsf5b	66	84.153	ENSCAFG00000016589	SRSF5	67	83.333	Canis_familiaris
ENSTNIG00000016411	srsf5b	66	84.153	ENSCAFG00020005661	SRSF5	67	83.333	Canis_lupus_dingo
ENSTNIG00000016411	srsf5b	66	84.153	ENSCHIG00000016794	SRSF5	66	83.333	Capra_hircus
ENSTNIG00000016411	srsf5b	66	84.153	ENSTSYG00000007786	SRSF5	100	70.318	Carlito_syrichta
ENSTNIG00000016411	srsf5b	66	84.153	ENSCAPG00000008801	SRSF5	98	71.583	Cavia_aperea
ENSTNIG00000016411	srsf5b	66	84.153	ENSCPOG00000039926	SRSF5	98	71.942	Cavia_porcellus
ENSTNIG00000016411	srsf5b	66	84.153	ENSCCAG00000029002	SRSF5	100	70.819	Cebus_capucinus
ENSTNIG00000016411	srsf5b	66	84.153	ENSCATG00000045051	SRSF5	100	70.819	Cercocebus_atys
ENSTNIG00000016411	srsf5b	66	84.153	ENSCLAG00000004755	SRSF5	67	83.333	Chinchilla_lanigera
ENSTNIG00000016411	srsf5b	66	84.153	ENSCSAG00000013041	SRSF5	100	70.819	Chlorocebus_sabaeus
ENSTNIG00000016411	srsf5b	66	84.699	ENSCPBG00000021653	SRSF5	100	64.388	Chrysemys_picta_bellii
ENSTNIG00000016411	srsf5b	66	84.153	ENSCANG00000030560	SRSF5	100	70.819	Colobus_angolensis_palliatus
ENSTNIG00000016411	srsf5b	66	84.153	ENSCGRG00001015339	Srsf5	100	65.827	Cricetulus_griseus_chok1gshd
ENSTNIG00000016411	srsf5b	66	84.153	ENSCGRG00000009833	Srsf5	100	71.326	Cricetulus_griseus_crigri
ENSTNIG00000016411	srsf5b	82	82.041	ENSCSEG00000003801	srsf5b	98	78.445	Cynoglossus_semilaevis
ENSTNIG00000016411	srsf5b	67	92.021	ENSCVAG00000017240	srsf5b	89	80.208	Cyprinodon_variegatus
ENSTNIG00000016411	srsf5b	66	91.257	ENSDARG00000027734	srsf5b	90	83.333	Danio_rerio
ENSTNIG00000016411	srsf5b	66	84.153	ENSDNOG00000006160	SRSF5	100	71.326	Dasypus_novemcinctus
ENSTNIG00000016411	srsf5b	66	84.153	ENSDORG00000003989	Srsf5	100	65.108	Dipodomys_ordii
ENSTNIG00000016411	srsf5b	66	79.781	ENSETEG00000020396	SRSF5	68	79.032	Echinops_telfairi
ENSTNIG00000016411	srsf5b	67	65.054	ENSEBUG00000006229	srsf5b	69	63.978	Eptatretus_burgeri
ENSTNIG00000016411	srsf5b	66	84.153	ENSEASG00005016615	SRSF5	67	83.333	Equus_asinus_asinus
ENSTNIG00000016411	srsf5b	66	84.153	ENSECAG00000026873	SRSF5	90	78.906	Equus_caballus
ENSTNIG00000016411	srsf5b	95	69.967	ENSELUG00000019852	srsf5b	94	68.092	Esox_lucius
ENSTNIG00000016411	srsf5b	66	84.153	ENSFCAG00000008848	SRSF5	90	78.906	Felis_catus
ENSTNIG00000016411	srsf5b	66	79.235	ENSFALG00000004979	SRSF5	100	62.230	Ficedula_albicollis
ENSTNIG00000016411	srsf5b	66	84.153	ENSFDAG00000011562	SRSF5	100	64.388	Fukomys_damarensis
ENSTNIG00000016411	srsf5b	95	81.618	ENSFHEG00000009476	srsf5b	89	82.721	Fundulus_heteroclitus
ENSTNIG00000016411	srsf5b	67	75.664	ENSGMOG00000000595	srsf5b	99	73.894	Gadus_morhua
ENSTNIG00000016411	srsf5b	66	79.781	ENSGALG00000009421	SRSF5	88	73.810	Gallus_gallus
ENSTNIG00000016411	srsf5b	95	83.271	ENSGAFG00000002865	srsf5b	91	82.182	Gambusia_affinis
ENSTNIG00000016411	srsf5b	95	65.432	ENSGACG00000007834	srsf5b	86	78.676	Gasterosteus_aculeatus
ENSTNIG00000016411	srsf5b	66	84.699	ENSGAGG00000004447	SRSF5	100	64.388	Gopherus_agassizii
ENSTNIG00000016411	srsf5b	66	84.153	ENSGGOG00000016462	SRSF5	100	70.819	Gorilla_gorilla
ENSTNIG00000016411	srsf5b	95	82.353	ENSHBUG00000012462	srsf5b	93	89.062	Haplochromis_burtoni
ENSTNIG00000016411	srsf5b	66	83.607	ENSHGLG00000010147	SRSF5	100	70.968	Heterocephalus_glaber_female
ENSTNIG00000016411	srsf5b	82	51.739	ENSHGLG00100000095	-	62	59.551	Heterocephalus_glaber_male
ENSTNIG00000016411	srsf5b	66	83.607	ENSHGLG00100015328	SRSF5	100	70.968	Heterocephalus_glaber_male
ENSTNIG00000016411	srsf5b	67	83.854	ENSHCOG00000005592	srsf5b	66	83.854	Hippocampus_comes
ENSTNIG00000016411	srsf5b	66	84.153	ENSSTOG00000020672	SRSF5	100	71.326	Ictidomys_tridecemlineatus
ENSTNIG00000016411	srsf5b	66	84.153	ENSJJAG00000001688	Srsf5	67	83.333	Jaculus_jaculus
ENSTNIG00000016411	srsf5b	95	85.448	ENSKMAG00000020486	srsf5b	91	81.752	Kryptolebias_marmoratus
ENSTNIG00000016411	srsf5b	95	82.657	ENSLBEG00000013647	srsf5b	92	80.216	Labrus_bergylta
ENSTNIG00000016411	srsf5b	66	83.607	ENSLACG00000005874	SRSF5	68	82.796	Latimeria_chalumnae
ENSTNIG00000016411	srsf5b	66	87.166	ENSLOCG00000012438	srsf5b	70	81.675	Lepisosteus_oculatus
ENSTNIG00000016411	srsf5b	66	83.607	ENSLAFG00000005260	SRSF5	67	82.796	Loxodonta_africana
ENSTNIG00000016411	srsf5b	66	84.153	ENSMFAG00000002393	SRSF5	100	70.819	Macaca_fascicularis
ENSTNIG00000016411	srsf5b	66	84.153	ENSMNEG00000030872	SRSF5	100	70.819	Macaca_nemestrina
ENSTNIG00000016411	srsf5b	66	84.153	ENSMLEG00000030017	SRSF5	100	70.819	Mandrillus_leucophaeus
ENSTNIG00000016411	srsf5b	88	86.056	ENSMAMG00000002673	srsf5b	92	84.815	Mastacembelus_armatus
ENSTNIG00000016411	srsf5b	95	84.015	ENSMZEG00005003550	srsf5b	94	81.455	Maylandia_zebra
ENSTNIG00000016411	srsf5b	52	76.923	ENSMGAG00000011835	SRSF5	100	55.882	Meleagris_gallopavo
ENSTNIG00000016411	srsf5b	66	84.153	ENSMAUG00000009544	Srsf5	100	71.326	Mesocricetus_auratus
ENSTNIG00000016411	srsf5b	66	84.153	ENSMICG00000037432	-	90	78.906	Microcebus_murinus
ENSTNIG00000016411	srsf5b	66	84.153	ENSMOCG00000013134	Srsf5	100	71.326	Microtus_ochrogaster
ENSTNIG00000016411	srsf5b	66	94.595	ENSMMOG00000000137	srsf5b	79	90.625	Mola_mola
ENSTNIG00000016411	srsf5b	66	84.699	ENSMODG00000011362	SRSF5	100	64.748	Monodelphis_domestica
ENSTNIG00000016411	srsf5b	95	82.353	ENSMALG00000021875	srsf5b	92	83.150	Monopterus_albus
ENSTNIG00000016411	srsf5b	66	84.153	ENSMUSG00000021134	Srsf5	96	88.636	Mus_musculus
ENSTNIG00000016411	srsf5b	66	84.153	MGP_PahariEiJ_G0029659	Srsf5	100	71.326	Mus_pahari
ENSTNIG00000016411	srsf5b	66	84.153	ENSMPUG00000007458	SRSF5	67	83.333	Mustela_putorius_furo
ENSTNIG00000016411	srsf5b	66	84.153	ENSMLUG00000011939	SRSF5	65	83.333	Myotis_lucifugus
ENSTNIG00000016411	srsf5b	66	84.153	ENSNGAG00000010073	-	100	70.968	Nannospalax_galili
ENSTNIG00000016411	srsf5b	95	81.250	ENSNBRG00000001285	srsf5b	94	80.000	Neolamprologus_brichardi
ENSTNIG00000016411	srsf5b	66	84.153	ENSNLEG00000001615	SRSF5	100	70.819	Nomascus_leucogenys
ENSTNIG00000016411	srsf5b	66	84.153	ENSOPRG00000008286	SRSF5	65	83.333	Ochotona_princeps
ENSTNIG00000016411	srsf5b	66	84.153	ENSODEG00000013469	-	100	64.748	Octodon_degus
ENSTNIG00000016411	srsf5b	66	82.514	ENSODEG00000000700	-	69	81.720	Octodon_degus
ENSTNIG00000016411	srsf5b	95	84.015	ENSONIG00000005759	srsf5b	94	81.455	Oreochromis_niloticus
ENSTNIG00000016411	srsf5b	66	80.328	ENSOANG00000013336	SRSF5	100	68.100	Ornithorhynchus_anatinus
ENSTNIG00000016411	srsf5b	66	84.153	ENSOCUG00000009274	SRSF5	66	83.333	Oryctolagus_cuniculus
ENSTNIG00000016411	srsf5b	95	71.044	ENSORLG00000029854	srsf5b	94	72.277	Oryzias_latipes
ENSTNIG00000016411	srsf5b	95	72.028	ENSORLG00015001720	srsf5b	95	80.505	Oryzias_latipes_hsok
ENSTNIG00000016411	srsf5b	95	71.080	ENSOMEG00000020690	srsf5b	68	77.739	Oryzias_melastigma
ENSTNIG00000016411	srsf5b	66	84.153	ENSOGAG00000015122	SRSF5	67	83.333	Otolemur_garnettii
ENSTNIG00000016411	srsf5b	66	84.153	ENSPPAG00000029921	SRSF5	100	70.819	Pan_paniscus
ENSTNIG00000016411	srsf5b	66	84.153	ENSPPRG00000012903	SRSF5	90	78.906	Panthera_pardus
ENSTNIG00000016411	srsf5b	66	84.153	ENSPTIG00000018589	SRSF5	90	78.906	Panthera_tigris_altaica
ENSTNIG00000016411	srsf5b	66	84.153	ENSPTRG00000006488	SRSF5	100	70.819	Pan_troglodytes
ENSTNIG00000016411	srsf5b	66	84.153	ENSPANG00000021091	SRSF5	100	70.819	Papio_anubis
ENSTNIG00000016411	srsf5b	66	84.699	ENSPSIG00000012522	SRSF5	69	83.871	Pelodiscus_sinensis
ENSTNIG00000016411	srsf5b	66	84.153	ENSPEMG00000020173	Srsf5	100	65.827	Peromyscus_maniculatus_bairdii
ENSTNIG00000016411	srsf5b	68	61.111	ENSPMAG00000007790	srsf5b	68	60.406	Petromyzon_marinus
ENSTNIG00000016411	srsf5b	66	84.699	ENSPCIG00000011877	SRSF5	100	64.748	Phascolarctos_cinereus
ENSTNIG00000016411	srsf5b	95	77.500	ENSPFOG00000017700	srsf5b	91	82.182	Poecilia_formosa
ENSTNIG00000016411	srsf5b	95	77.224	ENSPLAG00000006480	srsf5b	91	80.496	Poecilia_latipinna
ENSTNIG00000016411	srsf5b	95	77.500	ENSPMEG00000012751	srsf5b	91	82.182	Poecilia_mexicana
ENSTNIG00000016411	srsf5b	95	83.271	ENSPREG00000010381	srsf5b	91	82.182	Poecilia_reticulata
ENSTNIG00000016411	srsf5b	66	84.153	ENSPPYG00000005945	SRSF5	100	70.819	Pongo_abelii
ENSTNIG00000016411	srsf5b	54	82.667	ENSPCAG00000004405	SRSF5	100	82.667	Procavia_capensis
ENSTNIG00000016411	srsf5b	66	84.153	ENSPCOG00000014442	SRSF5	100	71.326	Propithecus_coquereli
ENSTNIG00000016411	srsf5b	95	81.413	ENSPNYG00000002669	srsf5b	94	89.062	Pundamilia_nyererei
ENSTNIG00000016411	srsf5b	68	91.444	ENSPNAG00000011262	srsf5b	84	83.333	Pygocentrus_nattereri
ENSTNIG00000016411	srsf5b	66	84.153	ENSRNOG00000005513	Srsf5	100	65.827	Rattus_norvegicus
ENSTNIG00000016411	srsf5b	66	84.153	ENSRBIG00000013003	SRSF5	100	70.819	Rhinopithecus_bieti
ENSTNIG00000016411	srsf5b	66	84.153	ENSRROG00000043407	SRSF5	100	70.819	Rhinopithecus_roxellana
ENSTNIG00000016411	srsf5b	66	84.153	ENSSBOG00000030784	SRSF5	100	70.819	Saimiri_boliviensis_boliviensis
ENSTNIG00000016411	srsf5b	66	84.699	ENSSHAG00000002871	SRSF5	100	64.748	Sarcophilus_harrisii
ENSTNIG00000016411	srsf5b	95	73.579	ENSSMAG00000019728	srsf5b	92	74.916	Scophthalmus_maximus
ENSTNIG00000016411	srsf5b	92	75.000	ENSSDUG00000005766	srsf5b	92	84.674	Seriola_dumerili
ENSTNIG00000016411	srsf5b	95	75.000	ENSSLDG00000023255	srsf5b	92	84.444	Seriola_lalandi_dorsalis
ENSTNIG00000016411	srsf5b	66	68.306	ENSSARG00000001059	SRSF5	100	63.082	Sorex_araneus
ENSTNIG00000016411	srsf5b	66	82.979	ENSSPUG00000002464	SRSF5	90	76.692	Sphenodon_punctatus
ENSTNIG00000016411	srsf5b	95	75.352	ENSSPAG00000015325	srsf5b	92	83.333	Stegastes_partitus
ENSTNIG00000016411	srsf5b	66	84.153	ENSSSCG00000032583	SRSF5	98	64.982	Sus_scrofa
ENSTNIG00000016411	srsf5b	66	80.328	ENSTGUG00000011425	SRSF5	100	62.230	Taeniopygia_guttata
ENSTNIG00000016411	srsf5b	97	77.228	ENSTRUG00000017811	srsf5b	96	81.544	Takifugu_rubripes
ENSTNIG00000016411	srsf5b	66	81.967	ENSTBEG00000001972	SRSF5	66	81.183	Tupaia_belangeri
ENSTNIG00000016411	srsf5b	66	84.066	ENSTTRG00000003318	SRSF5	66	83.243	Tursiops_truncatus
ENSTNIG00000016411	srsf5b	66	84.153	ENSUAMG00000014184	SRSF5	67	83.333	Ursus_americanus
ENSTNIG00000016411	srsf5b	66	87.500	ENSUMAG00000009827	SRSF5	98	64.621	Ursus_maritimus
ENSTNIG00000016411	srsf5b	66	84.153	ENSVPAG00000006448	SRSF5	100	71.326	Vicugna_pacos
ENSTNIG00000016411	srsf5b	66	84.153	ENSVVUG00000003790	SRSF5	67	83.333	Vulpes_vulpes
ENSTNIG00000016411	srsf5b	67	81.915	ENSXETG00000002211	srsf5	68	82.011	Xenopus_tropicalis
ENSTNIG00000016411	srsf5b	95	76.981	ENSXCOG00000001570	srsf5b	91	78.229	Xiphophorus_couchianus
ENSTNIG00000016411	srsf5b	95	83.026	ENSXMAG00000026416	srsf5b	91	81.949	Xiphophorus_maculatus