EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000016575 (Gene tree)
Gene ID: -
Gene Symbol: rab23
Alias: zgc:110261
Full Name: RAB23%2C member RAS oncogene family
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1169 bases
Position: chr17:4370795-4371963
Accession: ZDB-GENE-050522-328
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019675	MMR_HSR1	PF01926.23	1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019905	-	705	-	ENSTNIP00000019675	234 (aa)	-	H3DGN1

Gene Model

Click here to download ENSTNIG00000016575's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016575's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000016575	rab23	68	33.540	ENSTNIG00000012154	kras	84	33.540
ENSTNIG00000016575	rab23	69	35.185	ENSTNIG00000013184	-	66	35.664
ENSTNIG00000016575	rab23	67	37.423	ENSTNIG00000015000	zgc:101559	64	37.086
ENSTNIG00000016575	rab23	73	37.209	ENSTNIG00000008717	rab18a	83	37.209
ENSTNIG00000016575	rab23	66	33.758	ENSTNIG00000011385	hrasb	82	33.758
ENSTNIG00000016575	rab23	76	35.000	ENSTNIG00000006650	RAB19	74	35.625
ENSTNIG00000016575	rab23	59	31.429	ENSTNIG00000017844	-	68	30.469
ENSTNIG00000016575	rab23	74	34.483	ENSTNIG00000009196	rab5aa	75	33.333
ENSTNIG00000016575	rab23	67	40.000	ENSTNIG00000016231	rab34a	58	37.584
ENSTNIG00000016575	rab23	71	34.706	ENSTNIG00000003679	-	75	35.404
ENSTNIG00000016575	rab23	76	33.146	ENSTNIG00000011300	si:dkey-16l2.16	77	33.750
ENSTNIG00000016575	rab23	86	31.401	ENSTNIG00000013182	-	87	31.383
ENSTNIG00000016575	rab23	75	37.569	ENSTNIG00000011114	-	77	37.349
ENSTNIG00000016575	rab23	65	35.294	ENSTNIG00000003472	rab2a	91	31.313
ENSTNIG00000016575	rab23	75	32.768	ENSTNIG00000002003	-	82	31.737
ENSTNIG00000016575	rab23	68	32.099	ENSTNIG00000007566	si:ch73-116o1.2	75	32.099
ENSTNIG00000016575	rab23	65	39.744	ENSTNIG00000016158	rab34b	56	37.931
ENSTNIG00000016575	rab23	50	33.898	ENSTNIG00000006917	si:cabz01085950.1	80	33.019
ENSTNIG00000016575	rab23	73	33.721	ENSTNIG00000007882	rab18b	83	33.721
ENSTNIG00000016575	rab23	78	33.511	ENSTNIG00000009039	rab14	80	33.523
ENSTNIG00000016575	rab23	67	36.076	ENSTNIG00000008784	-	90	33.562
ENSTNIG00000016575	rab23	73	34.884	ENSTNIG00000018498	-	68	36.601
ENSTNIG00000016575	rab23	65	35.849	ENSTNIG00000005090	rab25a	68	34.459
ENSTNIG00000016575	rab23	67	41.772	ENSTNIG00000015257	rab6bb	70	41.781
ENSTNIG00000016575	rab23	66	34.591	ENSTNIG00000001956	RAB9A	70	33.333
ENSTNIG00000016575	rab23	72	35.882	ENSTNIG00000001043	si:ch211-247i17.1	75	35.762
ENSTNIG00000016575	rab23	74	36.782	ENSTNIG00000004004	-	85	36.774
ENSTNIG00000016575	rab23	62	37.415	ENSTNIG00000010125	rab33ba	56	37.037
ENSTNIG00000016575	rab23	67	33.333	ENSTNIG00000010122	rab33a	65	32.667
ENSTNIG00000016575	rab23	65	36.774	ENSTNIG00000014591	rheb	78	36.806
ENSTNIG00000016575	rab23	68	36.250	ENSTNIG00000011711	rab5c	67	35.135
ENSTNIG00000016575	rab23	67	40.994	ENSTNIG00000016831	RAB41	70	40.940
ENSTNIG00000016575	rab23	88	32.870	ENSTNIG00000012343	-	75	33.146
ENSTNIG00000016575	rab23	79	30.108	ENSTNIG00000014859	rab12	68	32.353
ENSTNIG00000016575	rab23	69	35.802	ENSTNIG00000001448	-	89	33.333
ENSTNIG00000016575	rab23	65	36.076	ENSTNIG00000001195	rab9a	73	34.694
ENSTNIG00000016575	rab23	76	38.674	ENSTNIG00000018319	-	85	39.053
ENSTNIG00000016575	rab23	71	30.114	ENSTNIG00000009798	nkiras1	60	31.304
ENSTNIG00000016575	rab23	67	36.076	ENSTNIG00000004511	-	86	38.406
ENSTNIG00000016575	rab23	75	37.569	ENSTNIG00000014604	RAB7A	77	37.349
ENSTNIG00000016575	rab23	71	32.934	ENSTNIG00000001260	RAB15	71	33.553
ENSTNIG00000016575	rab23	76	35.196	ENSTNIG00000011081	rab11bb	73	35.625
ENSTNIG00000016575	rab23	70	35.758	ENSTNIG00000016414	rab15	70	36.667
ENSTNIG00000016575	rab23	82	30.769	ENSTNIG00000018267	rab22a	91	30.055

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016575	rab23	99	83.475	ENSG00000112210	RAB23	99	83.475	Homo_sapiens
ENSTNIG00000016575	rab23	100	92.766	ENSAPOG00000008892	rab23	100	92.766	Acanthochromis_polyacanthus
ENSTNIG00000016575	rab23	99	83.475	ENSAMEG00000006825	RAB23	99	83.475	Ailuropoda_melanoleuca
ENSTNIG00000016575	rab23	100	81.624	ENSACIG00000020496	rab23	100	81.624	Amphilophus_citrinellus
ENSTNIG00000016575	rab23	100	93.191	ENSAOCG00000004234	rab23	100	93.191	Amphiprion_ocellaris
ENSTNIG00000016575	rab23	100	93.191	ENSAPEG00000019758	rab23	100	93.191	Amphiprion_percula
ENSTNIG00000016575	rab23	100	94.043	ENSATEG00000020913	rab23	100	94.043	Anabas_testudineus
ENSTNIG00000016575	rab23	75	90.341	ENSAPLG00000003715	RAB23	99	90.341	Anas_platyrhynchos
ENSTNIG00000016575	rab23	99	80.169	ENSACAG00000006656	RAB23	99	80.169	Anolis_carolinensis
ENSTNIG00000016575	rab23	99	83.475	ENSANAG00000027052	-	99	83.475	Aotus_nancymaae
ENSTNIG00000016575	rab23	100	93.191	ENSACLG00000002819	rab23	100	93.191	Astatotilapia_calliptera
ENSTNIG00000016575	rab23	100	87.764	ENSAMXG00000014960	rab23	100	87.764	Astyanax_mexicanus
ENSTNIG00000016575	rab23	99	83.475	ENSBTAG00000005362	RAB23	99	83.475	Bos_taurus
ENSTNIG00000016575	rab23	99	83.475	ENSCJAG00000010247	RAB23	99	83.475	Callithrix_jacchus
ENSTNIG00000016575	rab23	99	83.898	ENSCAFG00000002459	RAB23	99	83.898	Canis_familiaris
ENSTNIG00000016575	rab23	99	83.898	ENSCAFG00020015900	RAB23	99	83.898	Canis_lupus_dingo
ENSTNIG00000016575	rab23	99	83.475	ENSCHIG00000009815	RAB23	99	83.475	Capra_hircus
ENSTNIG00000016575	rab23	100	83.544	ENSTSYG00000029126	RAB23	100	83.544	Carlito_syrichta
ENSTNIG00000016575	rab23	99	81.702	ENSCPOG00000030218	RAB23	99	81.702	Cavia_porcellus
ENSTNIG00000016575	rab23	99	83.051	ENSCCAG00000020364	RAB23	99	83.051	Cebus_capucinus
ENSTNIG00000016575	rab23	99	83.898	ENSCATG00000027876	RAB23	99	83.898	Cercocebus_atys
ENSTNIG00000016575	rab23	99	82.627	ENSCLAG00000000797	RAB23	99	82.627	Chinchilla_lanigera
ENSTNIG00000016575	rab23	99	83.898	ENSCSAG00000013438	RAB23	99	83.898	Chlorocebus_sabaeus
ENSTNIG00000016575	rab23	99	81.780	ENSCPBG00000022640	RAB23	99	81.780	Chrysemys_picta_bellii
ENSTNIG00000016575	rab23	100	65.984	ENSCING00000001155	-	100	67.623	Ciona_intestinalis
ENSTNIG00000016575	rab23	100	64.463	ENSCSAVG00000001356	-	100	64.609	Ciona_savignyi
ENSTNIG00000016575	rab23	99	83.475	ENSCANG00000031065	RAB23	99	83.475	Colobus_angolensis_palliatus
ENSTNIG00000016575	rab23	99	83.898	ENSCGRG00001008994	Rab23	99	83.898	Cricetulus_griseus_chok1gshd
ENSTNIG00000016575	rab23	99	82.979	ENSCGRG00000013630	Rab23	99	82.979	Cricetulus_griseus_crigri
ENSTNIG00000016575	rab23	100	80.769	ENSCSEG00000010565	rab23	100	80.769	Cynoglossus_semilaevis
ENSTNIG00000016575	rab23	100	92.340	ENSCVAG00000020501	rab23	100	92.340	Cyprinodon_variegatus
ENSTNIG00000016575	rab23	100	85.232	ENSDARG00000004151	rab23	100	85.232	Danio_rerio
ENSTNIG00000016575	rab23	99	82.128	ENSDNOG00000015501	RAB23	99	82.128	Dasypus_novemcinctus
ENSTNIG00000016575	rab23	100	81.780	ENSDORG00000028344	Rab23	100	81.780	Dipodomys_ordii
ENSTNIG00000016575	rab23	94	61.674	FBgn0037364	Rab23	82	61.674	Drosophila_melanogaster
ENSTNIG00000016575	rab23	96	65.939	ENSEBUG00000010861	-	91	65.939	Eptatretus_burgeri
ENSTNIG00000016575	rab23	99	83.475	ENSEASG00005003529	RAB23	99	83.475	Equus_asinus_asinus
ENSTNIG00000016575	rab23	99	83.898	ENSECAG00000013427	RAB23	99	83.898	Equus_caballus
ENSTNIG00000016575	rab23	100	82.278	ENSEEUG00000015045	RAB23	100	82.278	Erinaceus_europaeus
ENSTNIG00000016575	rab23	100	87.660	ENSELUG00000020788	rab23	100	87.660	Esox_lucius
ENSTNIG00000016575	rab23	99	83.898	ENSFCAG00000044358	RAB23	99	83.898	Felis_catus
ENSTNIG00000016575	rab23	99	81.356	ENSFALG00000001708	RAB23	99	81.356	Ficedula_albicollis
ENSTNIG00000016575	rab23	99	82.203	ENSFDAG00000014834	RAB23	99	82.203	Fukomys_damarensis
ENSTNIG00000016575	rab23	100	91.915	ENSFHEG00000023069	rab23	100	91.915	Fundulus_heteroclitus
ENSTNIG00000016575	rab23	100	88.085	ENSGMOG00000005102	rab23	100	88.085	Gadus_morhua
ENSTNIG00000016575	rab23	99	82.203	ENSGALG00000016279	RAB23	99	82.203	Gallus_gallus
ENSTNIG00000016575	rab23	100	90.638	ENSGAFG00000007684	rab23	100	90.638	Gambusia_affinis
ENSTNIG00000016575	rab23	100	91.915	ENSGACG00000006151	rab23	100	91.915	Gasterosteus_aculeatus
ENSTNIG00000016575	rab23	99	82.203	ENSGAGG00000012709	RAB23	99	82.203	Gopherus_agassizii
ENSTNIG00000016575	rab23	100	81.624	ENSHBUG00000007966	rab23	100	81.624	Haplochromis_burtoni
ENSTNIG00000016575	rab23	99	82.203	ENSHGLG00000013030	-	99	82.203	Heterocephalus_glaber_female
ENSTNIG00000016575	rab23	99	69.583	ENSHGLG00000009371	-	99	68.750	Heterocephalus_glaber_female
ENSTNIG00000016575	rab23	99	82.203	ENSHGLG00100005945	-	99	82.203	Heterocephalus_glaber_male
ENSTNIG00000016575	rab23	99	69.583	ENSHGLG00100017177	-	99	68.750	Heterocephalus_glaber_male
ENSTNIG00000016575	rab23	100	78.205	ENSHCOG00000013919	rab23	100	78.205	Hippocampus_comes
ENSTNIG00000016575	rab23	100	76.695	ENSIPUG00000016494	rab23	100	76.695	Ictalurus_punctatus
ENSTNIG00000016575	rab23	99	83.051	ENSSTOG00000010962	RAB23	99	83.051	Ictidomys_tridecemlineatus
ENSTNIG00000016575	rab23	99	83.475	ENSJJAG00000020094	Rab23	99	83.475	Jaculus_jaculus
ENSTNIG00000016575	rab23	100	93.617	ENSKMAG00000018270	rab23	100	93.617	Kryptolebias_marmoratus
ENSTNIG00000016575	rab23	100	92.766	ENSLBEG00000013176	rab23	100	92.766	Labrus_bergylta
ENSTNIG00000016575	rab23	100	84.810	ENSLACG00000004025	RAB23	100	84.810	Latimeria_chalumnae
ENSTNIG00000016575	rab23	100	85.000	ENSLOCG00000016999	rab23	100	85.000	Lepisosteus_oculatus
ENSTNIG00000016575	rab23	99	83.898	ENSLAFG00000007209	RAB23	99	83.898	Loxodonta_africana
ENSTNIG00000016575	rab23	99	83.898	ENSMFAG00000032369	RAB23	99	83.898	Macaca_fascicularis
ENSTNIG00000016575	rab23	99	83.898	ENSMMUG00000018003	RAB23	99	83.898	Macaca_mulatta
ENSTNIG00000016575	rab23	99	83.898	ENSMNEG00000037012	RAB23	99	83.898	Macaca_nemestrina
ENSTNIG00000016575	rab23	99	83.898	ENSMLEG00000042429	RAB23	99	83.898	Mandrillus_leucophaeus
ENSTNIG00000016575	rab23	100	93.617	ENSMAMG00000015456	rab23	100	93.617	Mastacembelus_armatus
ENSTNIG00000016575	rab23	100	93.191	ENSMZEG00005005441	rab23	100	93.191	Maylandia_zebra
ENSTNIG00000016575	rab23	99	82.627	ENSMGAG00000013882	RAB23	99	82.627	Meleagris_gallopavo
ENSTNIG00000016575	rab23	99	84.322	ENSMICG00000014037	RAB23	99	84.322	Microcebus_murinus
ENSTNIG00000016575	rab23	99	83.051	ENSMOCG00000000444	Rab23	99	83.051	Microtus_ochrogaster
ENSTNIG00000016575	rab23	100	82.906	ENSMMOG00000007703	rab23	100	82.906	Mola_mola
ENSTNIG00000016575	rab23	99	83.475	ENSMODG00000018720	RAB23	99	83.475	Monodelphis_domestica
ENSTNIG00000016575	rab23	100	93.191	ENSMALG00000002136	rab23	100	93.191	Monopterus_albus
ENSTNIG00000016575	rab23	99	82.203	MGP_CAROLIEiJ_G0014015	Rab23	99	82.203	Mus_caroli
ENSTNIG00000016575	rab23	99	81.356	ENSMUSG00000004768	Rab23	99	81.356	Mus_musculus
ENSTNIG00000016575	rab23	99	81.356	MGP_PahariEiJ_G0027261	Rab23	99	81.356	Mus_pahari
ENSTNIG00000016575	rab23	99	81.780	MGP_SPRETEiJ_G0014820	Rab23	99	81.780	Mus_spretus
ENSTNIG00000016575	rab23	99	75.527	ENSMPUG00000002642	RAB23	99	75.527	Mustela_putorius_furo
ENSTNIG00000016575	rab23	99	83.475	ENSMLUG00000004058	RAB23	99	83.475	Myotis_lucifugus
ENSTNIG00000016575	rab23	99	83.051	ENSNGAG00000018038	Rab23	99	83.051	Nannospalax_galili
ENSTNIG00000016575	rab23	100	93.191	ENSNBRG00000013691	rab23	100	93.191	Neolamprologus_brichardi
ENSTNIG00000016575	rab23	99	83.898	ENSNLEG00000027830	RAB23	99	83.898	Nomascus_leucogenys
ENSTNIG00000016575	rab23	99	80.932	ENSODEG00000016056	RAB23	99	80.932	Octodon_degus
ENSTNIG00000016575	rab23	100	92.373	ENSONIG00000009749	rab23	100	92.373	Oreochromis_niloticus
ENSTNIG00000016575	rab23	99	83.898	ENSOANG00000001398	RAB23	99	83.898	Ornithorhynchus_anatinus
ENSTNIG00000016575	rab23	99	83.898	ENSOCUG00000004816	RAB23	99	83.898	Oryctolagus_cuniculus
ENSTNIG00000016575	rab23	100	90.638	ENSORLG00000010115	rab23	100	90.638	Oryzias_latipes
ENSTNIG00000016575	rab23	100	90.638	ENSORLG00020020220	rab23	100	90.638	Oryzias_latipes_hni
ENSTNIG00000016575	rab23	100	89.787	ENSORLG00015004033	rab23	100	89.787	Oryzias_latipes_hsok
ENSTNIG00000016575	rab23	100	91.489	ENSOMEG00000001706	rab23	100	91.489	Oryzias_melastigma
ENSTNIG00000016575	rab23	99	83.051	ENSOGAG00000005675	RAB23	99	83.051	Otolemur_garnettii
ENSTNIG00000016575	rab23	99	83.475	ENSOARG00000005749	RAB23	99	83.475	Ovis_aries
ENSTNIG00000016575	rab23	99	83.475	ENSPPAG00000010023	RAB23	99	83.475	Pan_paniscus
ENSTNIG00000016575	rab23	99	83.475	ENSPPRG00000012453	RAB23	99	83.475	Panthera_pardus
ENSTNIG00000016575	rab23	99	83.898	ENSPTIG00000009435	RAB23	99	83.898	Panthera_tigris_altaica
ENSTNIG00000016575	rab23	99	83.898	ENSPTRG00000043341	RAB23	99	83.898	Pan_troglodytes
ENSTNIG00000016575	rab23	99	83.898	ENSPANG00000017772	RAB23	99	83.898	Papio_anubis
ENSTNIG00000016575	rab23	80	88.770	ENSPKIG00000024310	rab23	92	88.770	Paramormyrops_kingsleyae
ENSTNIG00000016575	rab23	99	82.203	ENSPSIG00000015579	RAB23	99	82.203	Pelodiscus_sinensis
ENSTNIG00000016575	rab23	100	78.632	ENSPMGG00000008577	rab23	100	78.632	Periophthalmus_magnuspinnatus
ENSTNIG00000016575	rab23	99	82.203	ENSPEMG00000023271	Rab23	99	82.203	Peromyscus_maniculatus_bairdii
ENSTNIG00000016575	rab23	100	67.521	ENSPMAG00000006835	-	100	67.521	Petromyzon_marinus
ENSTNIG00000016575	rab23	99	82.627	ENSPCIG00000007267	RAB23	99	82.627	Phascolarctos_cinereus
ENSTNIG00000016575	rab23	100	91.489	ENSPFOG00000011493	rab23	100	91.489	Poecilia_formosa
ENSTNIG00000016575	rab23	100	91.064	ENSPLAG00000011697	rab23	100	91.064	Poecilia_latipinna
ENSTNIG00000016575	rab23	100	91.064	ENSPMEG00000017300	rab23	100	91.064	Poecilia_mexicana
ENSTNIG00000016575	rab23	100	80.769	ENSPREG00000022509	rab23	100	80.769	Poecilia_reticulata
ENSTNIG00000016575	rab23	99	83.898	ENSPPYG00000016739	RAB23	99	83.898	Pongo_abelii
ENSTNIG00000016575	rab23	99	83.898	ENSPCOG00000028471	RAB23	99	83.898	Propithecus_coquereli
ENSTNIG00000016575	rab23	99	75.424	ENSPVAG00000017693	RAB23	99	75.424	Pteropus_vampyrus
ENSTNIG00000016575	rab23	100	93.191	ENSPNYG00000019639	rab23	100	93.191	Pundamilia_nyererei
ENSTNIG00000016575	rab23	100	88.608	ENSPNAG00000024728	rab23	100	88.608	Pygocentrus_nattereri
ENSTNIG00000016575	rab23	99	82.627	ENSRNOG00000012629	Rab23	99	82.627	Rattus_norvegicus
ENSTNIG00000016575	rab23	99	78.838	ENSRBIG00000030547	RAB23	99	78.838	Rhinopithecus_bieti
ENSTNIG00000016575	rab23	99	83.898	ENSRROG00000035920	RAB23	99	83.898	Rhinopithecus_roxellana
ENSTNIG00000016575	rab23	99	83.051	ENSSBOG00000033237	RAB23	99	83.051	Saimiri_boliviensis_boliviensis
ENSTNIG00000016575	rab23	99	82.627	ENSSHAG00000006379	RAB23	99	82.627	Sarcophilus_harrisii
ENSTNIG00000016575	rab23	100	87.764	ENSSFOG00015012604	rab23	100	87.764	Scleropages_formosus
ENSTNIG00000016575	rab23	100	91.915	ENSSMAG00000006341	rab23	100	91.915	Scophthalmus_maximus
ENSTNIG00000016575	rab23	100	93.191	ENSSDUG00000023508	rab23	100	93.191	Seriola_dumerili
ENSTNIG00000016575	rab23	100	93.191	ENSSLDG00000000287	rab23	100	93.191	Seriola_lalandi_dorsalis
ENSTNIG00000016575	rab23	99	82.203	ENSSARG00000013689	RAB23	99	82.203	Sorex_araneus
ENSTNIG00000016575	rab23	99	83.898	ENSSPUG00000006274	RAB23	99	83.898	Sphenodon_punctatus
ENSTNIG00000016575	rab23	100	93.191	ENSSPAG00000010373	rab23	100	93.191	Stegastes_partitus
ENSTNIG00000016575	rab23	99	83.475	ENSSSCG00000029539	RAB23	99	83.475	Sus_scrofa
ENSTNIG00000016575	rab23	99	81.780	ENSTGUG00000012794	RAB23	99	81.780	Taeniopygia_guttata
ENSTNIG00000016575	rab23	100	94.444	ENSTRUG00000015697	rab23	100	94.444	Takifugu_rubripes
ENSTNIG00000016575	rab23	99	83.898	ENSUAMG00000013367	RAB23	99	83.898	Ursus_americanus
ENSTNIG00000016575	rab23	99	83.898	ENSUMAG00000018629	RAB23	99	83.898	Ursus_maritimus
ENSTNIG00000016575	rab23	81	64.921	ENSVPAG00000006805	RAB23	100	64.921	Vicugna_pacos
ENSTNIG00000016575	rab23	99	84.322	ENSVVUG00000008535	RAB23	99	84.322	Vulpes_vulpes
ENSTNIG00000016575	rab23	100	79.412	ENSXETG00000004449	rab23	100	79.412	Xenopus_tropicalis
ENSTNIG00000016575	rab23	100	90.638	ENSXCOG00000011864	rab23	100	90.638	Xiphophorus_couchianus
ENSTNIG00000016575	rab23	100	91.064	ENSXMAG00000009387	rab23	100	91.064	Xiphophorus_maculatus