EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016586 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: si:dkey-85a20.4
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 7843 bases
Position: chr17:3948387-3956229
Accession: ZDB-GENE-090313-347
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000002496	SpoU_methylase	PF00588.19	2.5e-29	1	1
ENSTNIP00000019688	SpoU_methylase	PF00588.19	3.3e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000001752	-	4068	-	ENSTNIP00000002496	1356 (aa)	-	H3C2M8
ENSTNIT00000019918	-	4803	-	ENSTNIP00000019688	1601 (aa)	-	H3DGP4

Gene Model

Click here to download ENSTNIG00000016586's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016586's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016586	si:dkey-85a20.4	99	45.105	ENSG00000059588	TARBP1	91	40.852	Homo_sapiens
ENSTNIG00000016586	si:dkey-85a20.4	99	72.495	ENSAPOG00000016419	si:dkey-85a20.4	94	66.625	Acanthochromis_polyacanthus
ENSTNIG00000016586	si:dkey-85a20.4	99	43.592	ENSAMEG00000003359	TARBP1	99	43.292	Ailuropoda_melanoleuca
ENSTNIG00000016586	si:dkey-85a20.4	99	71.845	ENSATEG00000020266	si:dkey-85a20.4	94	66.317	Anabas_testudineus
ENSTNIG00000016586	si:dkey-85a20.4	99	46.109	ENSAPLG00000007666	TARBP1	99	46.073	Anas_platyrhynchos
ENSTNIG00000016586	si:dkey-85a20.4	99	42.648	ENSACAG00000001142	TARBP1	93	38.892	Anolis_carolinensis
ENSTNIG00000016586	si:dkey-85a20.4	99	44.348	ENSANAG00000022031	TARBP1	86	44.130	Aotus_nancymaae
ENSTNIG00000016586	si:dkey-85a20.4	91	54.297	ENSBTAG00000004517	TARBP1	93	50.916	Bos_taurus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.960	ENSCJAG00000018155	TARBP1	91	40.602	Callithrix_jacchus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.147	ENSCAFG00000011533	TARBP1	96	43.832	Canis_familiaris
ENSTNIG00000016586	si:dkey-85a20.4	99	44.113	ENSCAFG00020027141	TARBP1	94	39.057	Canis_lupus_dingo
ENSTNIG00000016586	si:dkey-85a20.4	99	44.574	ENSCHIG00000011437	TARBP1	94	39.694	Capra_hircus
ENSTNIG00000016586	si:dkey-85a20.4	95	44.707	ENSTSYG00000010382	TARBP1	96	44.317	Carlito_syrichta
ENSTNIG00000016586	si:dkey-85a20.4	93	42.215	ENSCAPG00000010831	TARBP1	99	42.138	Cavia_aperea
ENSTNIG00000016586	si:dkey-85a20.4	99	44.669	ENSCPOG00000013995	TARBP1	92	40.151	Cavia_porcellus
ENSTNIG00000016586	si:dkey-85a20.4	95	54.215	ENSCCAG00000037278	TARBP1	91	51.487	Cebus_capucinus
ENSTNIG00000016586	si:dkey-85a20.4	99	45.119	ENSCATG00000011754	TARBP1	91	40.977	Cercocebus_atys
ENSTNIG00000016586	si:dkey-85a20.4	96	44.461	ENSCLAG00000003655	TARBP1	96	44.075	Chinchilla_lanigera
ENSTNIG00000016586	si:dkey-85a20.4	94	45.664	ENSCSAG00000010100	TARBP1	99	45.587	Chlorocebus_sabaeus
ENSTNIG00000016586	si:dkey-85a20.4	93	43.648	ENSCPBG00000005587	TARBP1	82	49.371	Chrysemys_picta_bellii
ENSTNIG00000016586	si:dkey-85a20.4	99	45.018	ENSCANG00000034343	TARBP1	99	44.945	Colobus_angolensis_palliatus
ENSTNIG00000016586	si:dkey-85a20.4	99	43.403	ENSCGRG00001016690	Tarbp1	94	39.334	Cricetulus_griseus_chok1gshd
ENSTNIG00000016586	si:dkey-85a20.4	99	43.403	ENSCGRG00000016893	Tarbp1	93	43.403	Cricetulus_griseus_crigri
ENSTNIG00000016586	si:dkey-85a20.4	96	76.190	ENSCSEG00000005255	si:dkey-85a20.4	93	76.190	Cynoglossus_semilaevis
ENSTNIG00000016586	si:dkey-85a20.4	99	59.764	ENSDARG00000079055	si:dkey-85a20.4	99	69.625	Danio_rerio
ENSTNIG00000016586	si:dkey-85a20.4	99	44.676	ENSDNOG00000008637	TARBP1	92	40.438	Dasypus_novemcinctus
ENSTNIG00000016586	si:dkey-85a20.4	95	44.655	ENSDORG00000007984	Tarbp1	100	44.419	Dipodomys_ordii
ENSTNIG00000016586	si:dkey-85a20.4	99	44.902	ENSEASG00005000252	TARBP1	94	40.195	Equus_asinus_asinus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.985	ENSECAG00000023673	TARBP1	91	43.077	Equus_caballus
ENSTNIG00000016586	si:dkey-85a20.4	99	61.747	ENSELUG00000012193	si:dkey-85a20.4	95	56.254	Esox_lucius
ENSTNIG00000016586	si:dkey-85a20.4	99	42.299	ENSFCAG00000014183	TARBP1	94	37.979	Felis_catus
ENSTNIG00000016586	si:dkey-85a20.4	95	46.595	ENSFALG00000013565	TARBP1	99	45.909	Ficedula_albicollis
ENSTNIG00000016586	si:dkey-85a20.4	94	44.318	ENSFDAG00000001308	TARBP1	99	44.006	Fukomys_damarensis
ENSTNIG00000016586	si:dkey-85a20.4	91	73.913	ENSFHEG00000007565	si:dkey-85a20.4	92	73.913	Fundulus_heteroclitus
ENSTNIG00000016586	si:dkey-85a20.4	99	62.198	ENSGMOG00000004549	si:dkey-85a20.4	98	62.408	Gadus_morhua
ENSTNIG00000016586	si:dkey-85a20.4	99	44.818	ENSGALG00000011000	TARBP1	91	42.522	Gallus_gallus
ENSTNIG00000016586	si:dkey-85a20.4	99	68.787	ENSGAFG00000007387	si:dkey-85a20.4	94	62.647	Gambusia_affinis
ENSTNIG00000016586	si:dkey-85a20.4	100	71.604	ENSGACG00000005865	si:dkey-85a20.4	97	71.604	Gasterosteus_aculeatus
ENSTNIG00000016586	si:dkey-85a20.4	99	45.903	ENSGAGG00000012102	TARBP1	94	41.625	Gopherus_agassizii
ENSTNIG00000016586	si:dkey-85a20.4	99	43.922	ENSGGOG00000022879	TARBP1	99	43.994	Gorilla_gorilla
ENSTNIG00000016586	si:dkey-85a20.4	100	73.153	ENSHBUG00000008877	si:dkey-85a20.4	94	67.100	Haplochromis_burtoni
ENSTNIG00000016586	si:dkey-85a20.4	99	44.733	ENSHGLG00000011592	TARBP1	94	39.728	Heterocephalus_glaber_female
ENSTNIG00000016586	si:dkey-85a20.4	99	44.758	ENSHGLG00100015169	TARBP1	94	44.461	Heterocephalus_glaber_male
ENSTNIG00000016586	si:dkey-85a20.4	98	56.264	ENSIPUG00000005249	si:dkey-85a20.4	91	50.688	Ictalurus_punctatus
ENSTNIG00000016586	si:dkey-85a20.4	98	44.795	ENSSTOG00000032291	TARBP1	96	44.714	Ictidomys_tridecemlineatus
ENSTNIG00000016586	si:dkey-85a20.4	99	41.613	ENSJJAG00000017840	Tarbp1	94	41.541	Jaculus_jaculus
ENSTNIG00000016586	si:dkey-85a20.4	99	56.858	ENSKMAG00000017546	si:dkey-85a20.4	93	53.113	Kryptolebias_marmoratus
ENSTNIG00000016586	si:dkey-85a20.4	84	72.848	ENSLBEG00000012132	si:dkey-85a20.4	92	70.626	Labrus_bergylta
ENSTNIG00000016586	si:dkey-85a20.4	99	46.098	ENSLACG00000004337	TARBP1	94	41.545	Latimeria_chalumnae
ENSTNIG00000016586	si:dkey-85a20.4	99	55.377	ENSLOCG00000016214	si:dkey-85a20.4	94	50.062	Lepisosteus_oculatus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.638	ENSLAFG00000011394	TARBP1	95	40.448	Loxodonta_africana
ENSTNIG00000016586	si:dkey-85a20.4	99	43.560	ENSMFAG00000041068	TARBP1	92	39.646	Macaca_fascicularis
ENSTNIG00000016586	si:dkey-85a20.4	99	43.642	ENSMMUG00000021703	TARBP1	91	39.299	Macaca_mulatta
ENSTNIG00000016586	si:dkey-85a20.4	99	44.823	ENSMNEG00000045002	TARBP1	91	40.652	Macaca_nemestrina
ENSTNIG00000016586	si:dkey-85a20.4	99	44.752	ENSMLEG00000044182	TARBP1	99	44.679	Mandrillus_leucophaeus
ENSTNIG00000016586	si:dkey-85a20.4	100	71.891	ENSMAMG00000021760	si:dkey-85a20.4	95	65.964	Mastacembelus_armatus
ENSTNIG00000016586	si:dkey-85a20.4	100	73.080	ENSMZEG00005005751	si:dkey-85a20.4	94	67.038	Maylandia_zebra
ENSTNIG00000016586	si:dkey-85a20.4	99	44.213	ENSMAUG00000020968	Tarbp1	94	39.852	Mesocricetus_auratus
ENSTNIG00000016586	si:dkey-85a20.4	99	40.435	ENSMICG00000015280	TARBP1	92	36.336	Microcebus_murinus
ENSTNIG00000016586	si:dkey-85a20.4	99	43.497	ENSMOCG00000004128	Tarbp1	94	39.385	Microtus_ochrogaster
ENSTNIG00000016586	si:dkey-85a20.4	99	72.140	ENSMMOG00000007795	si:dkey-85a20.4	94	66.166	Mola_mola
ENSTNIG00000016586	si:dkey-85a20.4	99	44.760	ENSMODG00000008504	TARBP1	93	40.255	Monodelphis_domestica
ENSTNIG00000016586	si:dkey-85a20.4	99	71.025	ENSMALG00000002916	si:dkey-85a20.4	94	65.623	Monopterus_albus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.139	MGP_CAROLIEiJ_G0031729	Tarbp1	79	60.456	Mus_caroli
ENSTNIG00000016586	si:dkey-85a20.4	99	43.872	ENSMUSG00000090290	Tarbp1	92	40.470	Mus_musculus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.035	MGP_PahariEiJ_G0023326	Tarbp1	92	40.571	Mus_pahari
ENSTNIG00000016586	si:dkey-85a20.4	99	43.881	MGP_SPRETEiJ_G0032846	Tarbp1	92	40.470	Mus_spretus
ENSTNIG00000016586	si:dkey-85a20.4	91	44.806	ENSMPUG00000002802	TARBP1	99	44.480	Mustela_putorius_furo
ENSTNIG00000016586	si:dkey-85a20.4	99	42.816	ENSMLUG00000002414	TARBP1	99	42.743	Myotis_lucifugus
ENSTNIG00000016586	si:dkey-85a20.4	99	45.105	ENSNLEG00000002518	TARBP1	91	40.664	Nomascus_leucogenys
ENSTNIG00000016586	si:dkey-85a20.4	57	58.659	ENSMEUG00000011370	-	59	58.659	Notamacropus_eugenii
ENSTNIG00000016586	si:dkey-85a20.4	80	53.202	ENSOPRG00000013822	TARBP1	67	53.202	Ochotona_princeps
ENSTNIG00000016586	si:dkey-85a20.4	99	44.461	ENSODEG00000005238	TARBP1	98	39.606	Octodon_degus
ENSTNIG00000016586	si:dkey-85a20.4	99	72.873	ENSONIG00000009789	si:dkey-85a20.4	98	72.873	Oreochromis_niloticus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.332	ENSOCUG00000017418	TARBP1	91	39.601	Oryctolagus_cuniculus
ENSTNIG00000016586	si:dkey-85a20.4	99	65.033	ENSORLG00000010529	si:dkey-85a20.4	93	59.876	Oryzias_latipes
ENSTNIG00000016586	si:dkey-85a20.4	99	65.179	ENSORLG00020019264	si:dkey-85a20.4	93	59.926	Oryzias_latipes_hni
ENSTNIG00000016586	si:dkey-85a20.4	99	64.740	ENSORLG00015003276	si:dkey-85a20.4	93	59.567	Oryzias_latipes_hsok
ENSTNIG00000016586	si:dkey-85a20.4	99	43.384	ENSOGAG00000002379	TARBP1	91	39.234	Otolemur_garnettii
ENSTNIG00000016586	si:dkey-85a20.4	99	44.573	ENSOARG00000003434	TARBP1	99	39.752	Ovis_aries
ENSTNIG00000016586	si:dkey-85a20.4	99	45.098	ENSPPAG00000028097	TARBP1	99	45.171	Pan_paniscus
ENSTNIG00000016586	si:dkey-85a20.4	99	42.538	ENSPPRG00000013561	TARBP1	88	43.055	Panthera_pardus
ENSTNIG00000016586	si:dkey-85a20.4	98	43.529	ENSPTIG00000009281	TARBP1	99	43.405	Panthera_tigris_altaica
ENSTNIG00000016586	si:dkey-85a20.4	99	45.178	ENSPTRG00000002124	TARBP1	91	40.926	Pan_troglodytes
ENSTNIG00000016586	si:dkey-85a20.4	99	44.830	ENSPANG00000021933	TARBP1	91	40.627	Papio_anubis
ENSTNIG00000016586	si:dkey-85a20.4	99	57.403	ENSPKIG00000016716	si:dkey-85a20.4	93	52.056	Paramormyrops_kingsleyae
ENSTNIG00000016586	si:dkey-85a20.4	94	46.512	ENSPSIG00000010699	TARBP1	99	46.082	Pelodiscus_sinensis
ENSTNIG00000016586	si:dkey-85a20.4	99	44.307	ENSPEMG00000006888	Tarbp1	95	40.507	Peromyscus_maniculatus_bairdii
ENSTNIG00000016586	si:dkey-85a20.4	89	67.822	ENSPCIG00000029710	TARBP1	91	69.036	Phascolarctos_cinereus
ENSTNIG00000016586	si:dkey-85a20.4	99	68.540	ENSPFOG00000013020	si:dkey-85a20.4	98	68.613	Poecilia_formosa
ENSTNIG00000016586	si:dkey-85a20.4	99	68.787	ENSPLAG00000006044	si:dkey-85a20.4	94	63.164	Poecilia_latipinna
ENSTNIG00000016586	si:dkey-85a20.4	99	68.933	ENSPMEG00000017857	si:dkey-85a20.4	94	63.288	Poecilia_mexicana
ENSTNIG00000016586	si:dkey-85a20.4	99	68.649	ENSPREG00000022753	si:dkey-85a20.4	94	62.871	Poecilia_reticulata
ENSTNIG00000016586	si:dkey-85a20.4	89	44.029	ENSPPYG00000000102	TARBP1	90	41.794	Pongo_abelii
ENSTNIG00000016586	si:dkey-85a20.4	76	77.027	ENSPCAG00000004808	TARBP1	75	77.027	Procavia_capensis
ENSTNIG00000016586	si:dkey-85a20.4	99	43.137	ENSPCOG00000005666	TARBP1	94	38.889	Propithecus_coquereli
ENSTNIG00000016586	si:dkey-85a20.4	95	58.131	ENSPVAG00000014798	TARBP1	91	55.556	Pteropus_vampyrus
ENSTNIG00000016586	si:dkey-85a20.4	99	70.493	ENSPNYG00000019135	si:dkey-85a20.4	94	64.742	Pundamilia_nyererei
ENSTNIG00000016586	si:dkey-85a20.4	99	42.383	ENSRNOG00000053574	Tarbp1	94	38.889	Rattus_norvegicus
ENSTNIG00000016586	si:dkey-85a20.4	99	42.505	ENSRBIG00000043362	TARBP1	97	38.911	Rhinopithecus_bieti
ENSTNIG00000016586	si:dkey-85a20.4	99	45.112	ENSRROG00000029527	TARBP1	92	41.283	Rhinopithecus_roxellana
ENSTNIG00000016586	si:dkey-85a20.4	99	45.069	ENSSBOG00000034503	TARBP1	96	45.069	Saimiri_boliviensis_boliviensis
ENSTNIG00000016586	si:dkey-85a20.4	98	44.404	ENSSHAG00000000013	TARBP1	99	44.145	Sarcophilus_harrisii
ENSTNIG00000016586	si:dkey-85a20.4	100	57.331	ENSSFOG00015002660	si:dkey-85a20.4	99	58.216	Scleropages_formosus
ENSTNIG00000016586	si:dkey-85a20.4	99	73.757	ENSSMAG00000007081	si:dkey-85a20.4	94	66.261	Scophthalmus_maximus
ENSTNIG00000016586	si:dkey-85a20.4	99	70.389	ENSSDUG00000023566	si:dkey-85a20.4	95	64.560	Seriola_dumerili
ENSTNIG00000016586	si:dkey-85a20.4	99	73.958	ENSSLDG00000020200	si:dkey-85a20.4	94	67.714	Seriola_lalandi_dorsalis
ENSTNIG00000016586	si:dkey-85a20.4	90	56.720	ENSSARG00000012207	TARBP1	76	56.720	Sorex_araneus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.428	ENSSPUG00000015364	TARBP1	94	40.172	Sphenodon_punctatus
ENSTNIG00000016586	si:dkey-85a20.4	99	72.714	ENSSPAG00000007213	si:dkey-85a20.4	94	66.934	Stegastes_partitus
ENSTNIG00000016586	si:dkey-85a20.4	99	44.485	ENSSSCG00000010160	TARBP1	94	41.482	Sus_scrofa
ENSTNIG00000016586	si:dkey-85a20.4	95	45.799	ENSTGUG00000010214	TARBP1	99	45.496	Taeniopygia_guttata
ENSTNIG00000016586	si:dkey-85a20.4	94	39.878	ENSTTRG00000008707	TARBP1	83	39.725	Tursiops_truncatus
ENSTNIG00000016586	si:dkey-85a20.4	95	43.505	ENSUMAG00000006730	TARBP1	97	43.192	Ursus_maritimus
ENSTNIG00000016586	si:dkey-85a20.4	76	75.532	ENSVPAG00000007665	TARBP1	73	75.532	Vicugna_pacos
ENSTNIG00000016586	si:dkey-85a20.4	99	44.049	ENSVVUG00000007460	TARBP1	96	43.904	Vulpes_vulpes
ENSTNIG00000016586	si:dkey-85a20.4	99	43.895	ENSXETG00000016224	tarbp1	99	43.605	Xenopus_tropicalis
ENSTNIG00000016586	si:dkey-85a20.4	99	63.039	ENSXCOG00000011779	si:dkey-85a20.4	100	66.584	Xiphophorus_couchianus
ENSTNIG00000016586	si:dkey-85a20.4	77	66.762	ENSXMAG00000009600	si:dkey-85a20.4	100	66.857	Xiphophorus_maculatus