EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016608 (Gene tree)
Gene ID: -
Gene Symbol: zc3h6
Alias: unm_hu7905
Full Name: zinc finger CCCH-type containing 6
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 4333 bases
Position: chr17:3332218-3336550
Accession: ZDB-GENE-120727-18
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000001769	zf-CCCH	PF00642.24	6.6e-12	1	1
ENSTNIP00000019713	zf-CCCH	PF00642.24	6e-11	1	1
ENSTNIP00000001769	zf-CCCH_2	PF14608.6	6.1e-06	1	3
ENSTNIP00000001769	zf-CCCH_2	PF14608.6	6.1e-06	2	3
ENSTNIP00000001769	zf-CCCH_2	PF14608.6	6.1e-06	3	3
ENSTNIP00000019713	zf-CCCH_2	PF14608.6	1e-05	1	3
ENSTNIP00000019713	zf-CCCH_2	PF14608.6	1e-05	2	3
ENSTNIP00000019713	zf-CCCH_2	PF14608.6	1e-05	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000019943	-	3171	-	ENSTNIP00000019713	1057 (aa)	-	H3DGR9
ENSTNIT00000000659	-	2712	-	ENSTNIP00000001769	903 (aa)	-	H3C0K3

Gene Model

Click here to download ENSTNIG00000016608's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016608's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016608	zc3h6	89	48.802	ENSG00000188177	ZC3H6	96	40.204	Homo_sapiens
ENSTNIG00000016608	zc3h6	99	68.538	ENSAPOG00000002681	zc3h6	93	68.984	Acanthochromis_polyacanthus
ENSTNIG00000016608	zc3h6	99	39.368	ENSAMEG00000016194	ZC3H6	89	40.056	Ailuropoda_melanoleuca
ENSTNIG00000016608	zc3h6	91	68.403	ENSACIG00000021843	zc3h6	92	61.488	Amphilophus_citrinellus
ENSTNIG00000016608	zc3h6	99	69.313	ENSAOCG00000004039	zc3h6	93	69.670	Amphiprion_ocellaris
ENSTNIG00000016608	zc3h6	99	69.519	ENSAPEG00000014561	zc3h6	93	69.697	Amphiprion_percula
ENSTNIG00000016608	zc3h6	100	69.759	ENSATEG00000019063	zc3h6	93	70.410	Anabas_testudineus
ENSTNIG00000016608	zc3h6	99	40.169	ENSAPLG00000014287	ZC3H6	96	40.253	Anas_platyrhynchos
ENSTNIG00000016608	zc3h6	81	56.107	ENSANAG00000024229	ZC3H6	79	41.325	Aotus_nancymaae
ENSTNIG00000016608	zc3h6	99	70.994	ENSACLG00000026343	zc3h6	93	71.262	Astatotilapia_calliptera
ENSTNIG00000016608	zc3h6	89	48.503	ENSCJAG00000016479	ZC3H6	89	40.420	Callithrix_jacchus
ENSTNIG00000016608	zc3h6	82	53.147	ENSCAFG00000007160	ZC3H6	89	39.740	Canis_familiaris
ENSTNIG00000016608	zc3h6	82	50.350	ENSCAFG00020017525	ZC3H6	89	38.997	Canis_lupus_dingo
ENSTNIG00000016608	zc3h6	74	63.776	ENSCHIG00000019719	-	95	41.419	Capra_hircus
ENSTNIG00000016608	zc3h6	83	52.759	ENSTSYG00000031857	ZC3H6	89	39.982	Carlito_syrichta
ENSTNIG00000016608	zc3h6	83	44.056	ENSCPOG00000003445	ZC3H6	97	37.382	Cavia_porcellus
ENSTNIG00000016608	zc3h6	81	56.107	ENSCATG00000036595	ZC3H6	99	40.165	Cercocebus_atys
ENSTNIG00000016608	zc3h6	83	54.577	ENSCLAG00000006605	ZC3H6	99	39.450	Chinchilla_lanigera
ENSTNIG00000016608	zc3h6	89	48.802	ENSCSAG00000016793	ZC3H6	99	40.073	Chlorocebus_sabaeus
ENSTNIG00000016608	zc3h6	89	48.503	ENSCANG00000041036	ZC3H6	97	40.017	Colobus_angolensis_palliatus
ENSTNIG00000016608	zc3h6	95	38.753	ENSCGRG00001022022	Zc3h6	80	41.214	Cricetulus_griseus_chok1gshd
ENSTNIG00000016608	zc3h6	95	38.814	ENSCGRG00000016162	Zc3h6	79	41.419	Cricetulus_griseus_crigri
ENSTNIG00000016608	zc3h6	99	62.224	ENSCSEG00000012267	zc3h6	99	64.208	Cynoglossus_semilaevis
ENSTNIG00000016608	zc3h6	95	39.308	ENSDNOG00000044811	ZC3H6	89	39.256	Dasypus_novemcinctus
ENSTNIG00000016608	zc3h6	89	46.705	ENSDORG00000013967	Zc3h6	97	39.060	Dipodomys_ordii
ENSTNIG00000016608	zc3h6	80	57.143	ENSEASG00005006493	ZC3H6	94	41.710	Equus_asinus_asinus
ENSTNIG00000016608	zc3h6	81	56.107	ENSECAG00000023620	ZC3H6	89	39.817	Equus_caballus
ENSTNIG00000016608	zc3h6	70	52.850	ENSEEUG00000013883	-	59	53.093	Erinaceus_europaeus
ENSTNIG00000016608	zc3h6	99	49.960	ENSELUG00000012256	zc3h6	93	49.802	Esox_lucius
ENSTNIG00000016608	zc3h6	82	52.982	ENSFCAG00000008089	ZC3H6	89	39.944	Felis_catus
ENSTNIG00000016608	zc3h6	99	40.301	ENSFALG00000011589	ZC3H6	96	40.913	Ficedula_albicollis
ENSTNIG00000016608	zc3h6	82	53.819	ENSFDAG00000002521	ZC3H6	92	39.048	Fukomys_damarensis
ENSTNIG00000016608	zc3h6	56	64.477	ENSGMOG00000015741	zc3h6	54	63.084	Gadus_morhua
ENSTNIG00000016608	zc3h6	99	40.075	ENSGALG00000008269	ZC3H6	95	40.607	Gallus_gallus
ENSTNIG00000016608	zc3h6	93	65.548	ENSGAFG00000006771	zc3h6	88	65.698	Gambusia_affinis
ENSTNIG00000016608	zc3h6	99	67.325	ENSGACG00000005343	zc3h6	96	66.968	Gasterosteus_aculeatus
ENSTNIG00000016608	zc3h6	96	39.553	ENSGAGG00000010857	ZC3H6	97	40.840	Gopherus_agassizii
ENSTNIG00000016608	zc3h6	89	48.503	ENSGGOG00000001665	ZC3H6	97	39.830	Gorilla_gorilla
ENSTNIG00000016608	zc3h6	99	71.083	ENSHBUG00000010088	zc3h6	93	71.352	Haplochromis_burtoni
ENSTNIG00000016608	zc3h6	99	39.251	ENSHGLG00000011882	ZC3H6	89	39.068	Heterocephalus_glaber_female
ENSTNIG00000016608	zc3h6	99	38.238	ENSHGLG00100002559	ZC3H6	92	37.658	Heterocephalus_glaber_male
ENSTNIG00000016608	zc3h6	99	61.676	ENSHCOG00000012519	zc3h6	94	61.628	Hippocampus_comes
ENSTNIG00000016608	zc3h6	98	39.980	ENSSTOG00000008120	-	99	40.055	Ictidomys_tridecemlineatus
ENSTNIG00000016608	zc3h6	98	40.237	ENSJJAG00000013206	Zc3h6	92	39.483	Jaculus_jaculus
ENSTNIG00000016608	zc3h6	99	67.589	ENSKMAG00000016252	zc3h6	93	68.243	Kryptolebias_marmoratus
ENSTNIG00000016608	zc3h6	89	67.063	ENSLBEG00000003054	zc3h6	82	66.590	Labrus_bergylta
ENSTNIG00000016608	zc3h6	98	39.738	ENSLACG00000012014	ZC3H6	81	42.421	Latimeria_chalumnae
ENSTNIG00000016608	zc3h6	96	47.497	ENSLOCG00000016548	zc3h6	94	47.423	Lepisosteus_oculatus
ENSTNIG00000016608	zc3h6	99	39.962	ENSLAFG00000001151	ZC3H6	96	39.114	Loxodonta_africana
ENSTNIG00000016608	zc3h6	89	48.802	ENSMFAG00000036963	ZC3H6	96	40.102	Macaca_fascicularis
ENSTNIG00000016608	zc3h6	89	48.802	ENSMMUG00000016430	ZC3H6	96	40.102	Macaca_mulatta
ENSTNIG00000016608	zc3h6	89	48.802	ENSMNEG00000031225	ZC3H6	99	40.165	Macaca_nemestrina
ENSTNIG00000016608	zc3h6	81	56.107	ENSMLEG00000038821	ZC3H6	96	40.102	Mandrillus_leucophaeus
ENSTNIG00000016608	zc3h6	99	69.848	ENSMAMG00000021546	zc3h6	93	70.027	Mastacembelus_armatus
ENSTNIG00000016608	zc3h6	99	70.994	ENSMZEG00005006828	zc3h6	93	71.262	Maylandia_zebra
ENSTNIG00000016608	zc3h6	99	39.962	ENSMGAG00000003025	ZC3H6	96	40.438	Meleagris_gallopavo
ENSTNIG00000016608	zc3h6	73	67.358	ENSMAUG00000017009	Zc3h6	79	41.658	Mesocricetus_auratus
ENSTNIG00000016608	zc3h6	82	51.220	ENSMICG00000036353	ZC3H6	89	40.055	Microcebus_murinus
ENSTNIG00000016608	zc3h6	90	48.179	ENSMOCG00000002054	Zc3h6	61	63.547	Microtus_ochrogaster
ENSTNIG00000016608	zc3h6	99	38.219	ENSMODG00000006612	ZC3H6	80	40.493	Monodelphis_domestica
ENSTNIG00000016608	zc3h6	92	63.636	ENSMALG00000002048	zc3h6	84	63.344	Monopterus_albus
ENSTNIG00000016608	zc3h6	74	65.306	MGP_CAROLIEiJ_G0024278	Zc3h6	67	52.560	Mus_caroli
ENSTNIG00000016608	zc3h6	74	65.306	ENSMUSG00000042851	Zc3h6	67	54.909	Mus_musculus
ENSTNIG00000016608	zc3h6	83	51.379	MGP_PahariEiJ_G0025723	Zc3h6	64	57.940	Mus_pahari
ENSTNIG00000016608	zc3h6	82	54.444	MGP_SPRETEiJ_G0025198	Zc3h6	67	51.140	Mus_spretus
ENSTNIG00000016608	zc3h6	83	52.595	ENSMPUG00000009624	ZC3H6	99	40.353	Mustela_putorius_furo
ENSTNIG00000016608	zc3h6	83	52.759	ENSMLUG00000004896	ZC3H6	89	39.647	Myotis_lucifugus
ENSTNIG00000016608	zc3h6	99	39.255	ENSNGAG00000013596	Zc3h6	97	38.462	Nannospalax_galili
ENSTNIG00000016608	zc3h6	89	70.433	ENSNBRG00000015382	zc3h6	83	69.390	Neolamprologus_brichardi
ENSTNIG00000016608	zc3h6	98	39.293	ENSNLEG00000033657	ZC3H6	97	39.453	Nomascus_leucogenys
ENSTNIG00000016608	zc3h6	85	52.288	ENSOPRG00000012717	ZC3H6	65	59.583	Ochotona_princeps
ENSTNIG00000016608	zc3h6	82	55.036	ENSODEG00000009099	ZC3H6	95	39.308	Octodon_degus
ENSTNIG00000016608	zc3h6	99	70.777	ENSONIG00000009880	zc3h6	93	71.046	Oreochromis_niloticus
ENSTNIG00000016608	zc3h6	99	42.115	ENSOANG00000012054	-	94	41.285	Ornithorhynchus_anatinus
ENSTNIG00000016608	zc3h6	87	49.102	ENSOCUG00000011125	ZC3H6	99	39.087	Oryctolagus_cuniculus
ENSTNIG00000016608	zc3h6	99	64.222	ENSORLG00000011179	zc3h6	93	64.401	Oryzias_latipes
ENSTNIG00000016608	zc3h6	99	64.132	ENSORLG00020017202	zc3h6	93	64.311	Oryzias_latipes_hni
ENSTNIG00000016608	zc3h6	99	64.401	ENSORLG00015001664	zc3h6	93	64.311	Oryzias_latipes_hsok
ENSTNIG00000016608	zc3h6	99	64.482	ENSOMEG00000001296	zc3h6	93	64.482	Oryzias_melastigma
ENSTNIG00000016608	zc3h6	99	39.733	ENSOGAG00000002556	ZC3H6	90	39.963	Otolemur_garnettii
ENSTNIG00000016608	zc3h6	83	53.103	ENSOARG00000014503	ZC3H6	89	39.963	Ovis_aries
ENSTNIG00000016608	zc3h6	81	55.725	ENSPPAG00000030495	ZC3H6	97	40.460	Pan_paniscus
ENSTNIG00000016608	zc3h6	83	52.778	ENSPPRG00000005673	ZC3H6	89	40.130	Panthera_pardus
ENSTNIG00000016608	zc3h6	83	50.000	ENSPTIG00000015800	ZC3H6	89	39.292	Panthera_tigris_altaica
ENSTNIG00000016608	zc3h6	89	48.503	ENSPTRG00000012363	ZC3H6	96	40.204	Pan_troglodytes
ENSTNIG00000016608	zc3h6	83	53.333	ENSPANG00000025224	ZC3H6	90	39.671	Papio_anubis
ENSTNIG00000016608	zc3h6	68	78.571	ENSPKIG00000007353	zc3h6	81	72.889	Paramormyrops_kingsleyae
ENSTNIG00000016608	zc3h6	96	39.037	ENSPSIG00000002520	ZC3H6	98	40.302	Pelodiscus_sinensis
ENSTNIG00000016608	zc3h6	99	38.528	ENSPEMG00000000918	Zc3h6	87	38.159	Peromyscus_maniculatus_bairdii
ENSTNIG00000016608	zc3h6	99	40.541	ENSPCIG00000029741	ZC3H6	89	41.796	Phascolarctos_cinereus
ENSTNIG00000016608	zc3h6	99	63.862	ENSPFOG00000015748	zc3h6	94	64.956	Poecilia_formosa
ENSTNIG00000016608	zc3h6	99	63.596	ENSPLAG00000002469	zc3h6	94	64.690	Poecilia_latipinna
ENSTNIG00000016608	zc3h6	92	65.714	ENSPMEG00000020802	zc3h6	100	65.663	Poecilia_mexicana
ENSTNIG00000016608	zc3h6	76	86.567	ENSPREG00000023126	zc3h6	84	78.879	Poecilia_reticulata
ENSTNIG00000016608	zc3h6	81	37.935	ENSPCAG00000015468	ZC3H6	75	38.210	Procavia_capensis
ENSTNIG00000016608	zc3h6	82	51.568	ENSPCOG00000016627	ZC3H6	96	39.660	Propithecus_coquereli
ENSTNIG00000016608	zc3h6	70	42.657	ENSPVAG00000013728	ZC3H6	57	43.870	Pteropus_vampyrus
ENSTNIG00000016608	zc3h6	92	67.673	ENSPNYG00000018130	zc3h6	85	67.391	Pundamilia_nyererei
ENSTNIG00000016608	zc3h6	99	50.399	ENSPNAG00000009331	zc3h6	83	52.456	Pygocentrus_nattereri
ENSTNIG00000016608	zc3h6	99	40.476	ENSRNOG00000026277	Zc3h6	74	44.872	Rattus_norvegicus
ENSTNIG00000016608	zc3h6	81	56.489	ENSSBOG00000033489	ZC3H6	89	41.146	Saimiri_boliviensis_boliviensis
ENSTNIG00000016608	zc3h6	95	40.377	ENSSHAG00000016634	ZC3H6	96	40.825	Sarcophilus_harrisii
ENSTNIG00000016608	zc3h6	99	51.553	ENSSFOG00015004488	zc3h6	94	52.444	Scleropages_formosus
ENSTNIG00000016608	zc3h6	99	66.459	ENSSMAG00000008411	zc3h6	93	63.550	Scophthalmus_maximus
ENSTNIG00000016608	zc3h6	99	70.693	ENSSDUG00000006105	zc3h6	93	71.048	Seriola_dumerili
ENSTNIG00000016608	zc3h6	99	70.819	ENSSLDG00000021813	zc3h6	93	71.174	Seriola_lalandi_dorsalis
ENSTNIG00000016608	zc3h6	82	51.736	ENSSARG00000001035	ZC3H6	90	37.833	Sorex_araneus
ENSTNIG00000016608	zc3h6	67	56.693	ENSSPUG00000013031	-	59	54.545	Sphenodon_punctatus
ENSTNIG00000016608	zc3h6	99	39.981	ENSSSCG00000008096	ZC3H6	99	39.354	Sus_scrofa
ENSTNIG00000016608	zc3h6	99	40.226	ENSTGUG00000007468	ZC3H6	96	40.828	Taeniopygia_guttata
ENSTNIG00000016608	zc3h6	99	79.819	ENSTRUG00000012901	zc3h6	93	80.000	Takifugu_rubripes
ENSTNIG00000016608	zc3h6	72	52.571	ENSTBEG00000016232	ZC3H6	57	70.642	Tupaia_belangeri
ENSTNIG00000016608	zc3h6	55	56.107	ENSTTRG00000013154	ZC3H6	60	43.224	Tursiops_truncatus
ENSTNIG00000016608	zc3h6	83	52.941	ENSUAMG00000002401	ZC3H6	99	40.167	Ursus_americanus
ENSTNIG00000016608	zc3h6	99	39.261	ENSUMAG00000008663	ZC3H6	99	39.907	Ursus_maritimus
ENSTNIG00000016608	zc3h6	90	47.765	ENSVPAG00000005912	ZC3H6	80	45.370	Vicugna_pacos
ENSTNIG00000016608	zc3h6	82	52.941	ENSVVUG00000028662	ZC3H6	99	39.907	Vulpes_vulpes
ENSTNIG00000016608	zc3h6	84	50.235	ENSXETG00000013762	zc3h6	76	61.905	Xenopus_tropicalis
ENSTNIG00000016608	zc3h6	67	86.567	ENSXCOG00000011662	zc3h6	81	78.879	Xiphophorus_couchianus
ENSTNIG00000016608	zc3h6	99	63.531	ENSXMAG00000020822	zc3h6	93	64.539	Xiphophorus_maculatus