EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016716 (Gene tree)
Gene ID: -
Gene Symbol: mrpl1
Alias: si:dkey-58f10.1
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4914 bases
Position: chr12:9955642-9960555
Accession: ZDB-GENE-060526-311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000000315	Ribosomal_L1	PF00687.21	2.6e-14	1	1
ENSTNIP00000002970	Ribosomal_L1	PF00687.21	2.7e-14	1	1
ENSTNIP00000019826	Ribosomal_L1	PF00687.21	2.9e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000002069	-	834	-	ENSTNIP00000000315	278 (aa)	-	H3BWF3
ENSTNIT00000020056	-	998	-	ENSTNIP00000019826	317 (aa)	-	H3DH32
ENSTNIT00000001287	-	861	-	ENSTNIP00000002970	287 (aa)	-	H3C401

Gene Model

Click here to download ENSTNIG00000016716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016716	mrpl1	86	52.893	ENSG00000169288	MRPL1	93	51.152	Homo_sapiens
ENSTNIG00000016716	mrpl1	99	67.834	ENSAPOG00000005831	mrpl1	99	68.153	Acanthochromis_polyacanthus
ENSTNIG00000016716	mrpl1	96	76.580	ENSACIG00000002298	mrpl1	97	76.207	Amphilophus_citrinellus
ENSTNIG00000016716	mrpl1	99	71.019	ENSAOCG00000006715	mrpl1	99	71.019	Amphiprion_ocellaris
ENSTNIG00000016716	mrpl1	99	70.064	ENSAPEG00000020020	mrpl1	99	70.064	Amphiprion_percula
ENSTNIG00000016716	mrpl1	98	74.132	ENSATEG00000008760	mrpl1	99	75.079	Anabas_testudineus
ENSTNIG00000016716	mrpl1	78	55.505	ENSAPLG00000003428	MRPL1	96	50.183	Anas_platyrhynchos
ENSTNIG00000016716	mrpl1	79	51.131	ENSACAG00000012069	MRPL1	72	45.000	Anolis_carolinensis
ENSTNIG00000016716	mrpl1	99	43.614	ENSANAG00000035463	-	98	43.614	Aotus_nancymaae
ENSTNIG00000016716	mrpl1	83	45.022	ENSANAG00000020317	-	85	42.199	Aotus_nancymaae
ENSTNIG00000016716	mrpl1	100	75.155	ENSACLG00000001464	mrpl1	88	75.155	Astatotilapia_calliptera
ENSTNIG00000016716	mrpl1	92	64.202	ENSAMXG00000033077	mrpl1	99	55.000	Astyanax_mexicanus
ENSTNIG00000016716	mrpl1	96	48.881	ENSCPOG00000031686	MRPL1	98	46.082	Cavia_porcellus
ENSTNIG00000016716	mrpl1	99	43.614	ENSCLAG00000005041	MRPL1	98	44.343	Chinchilla_lanigera
ENSTNIG00000016716	mrpl1	99	41.745	ENSCANG00000033966	MRPL1	98	41.745	Colobus_angolensis_palliatus
ENSTNIG00000016716	mrpl1	97	49.446	ENSCGRG00001005376	-	99	46.296	Cricetulus_griseus_chok1gshd
ENSTNIG00000016716	mrpl1	97	49.077	ENSCGRG00000003658	-	99	45.988	Cricetulus_griseus_crigri
ENSTNIG00000016716	mrpl1	97	62.379	ENSCSEG00000014014	mrpl1	99	61.755	Cynoglossus_semilaevis
ENSTNIG00000016716	mrpl1	98	72.698	ENSCVAG00000021636	mrpl1	98	72.698	Cyprinodon_variegatus
ENSTNIG00000016716	mrpl1	99	57.812	ENSDARG00000054606	mrpl1	98	57.812	Danio_rerio
ENSTNIG00000016716	mrpl1	99	48.758	ENSDNOG00000001665	MRPL1	98	48.758	Dasypus_novemcinctus
ENSTNIG00000016716	mrpl1	96	49.442	ENSDORG00000015752	Mrpl1	96	45.370	Dipodomys_ordii
ENSTNIG00000016716	mrpl1	90	43.200	ENSEBUG00000004815	mrpl1	75	43.200	Eptatretus_burgeri
ENSTNIG00000016716	mrpl1	98	60.625	ENSELUG00000013391	mrpl1	99	60.625	Esox_lucius
ENSTNIG00000016716	mrpl1	99	47.222	ENSFCAG00000013776	MRPL1	98	47.222	Felis_catus
ENSTNIG00000016716	mrpl1	94	48.519	ENSFALG00000008527	MRPL1	95	48.014	Ficedula_albicollis
ENSTNIG00000016716	mrpl1	99	44.828	ENSFDAG00000011113	MRPL1	97	46.106	Fukomys_damarensis
ENSTNIG00000016716	mrpl1	99	68.966	ENSFHEG00000012375	mrpl1	99	69.279	Fundulus_heteroclitus
ENSTNIG00000016716	mrpl1	88	46.595	ENSGALG00000010324	MRPL1	91	46.926	Gallus_gallus
ENSTNIG00000016716	mrpl1	99	67.601	ENSGAFG00000006089	mrpl1	86	68.731	Gambusia_affinis
ENSTNIG00000016716	mrpl1	94	56.923	ENSGAGG00000015092	MRPL1	85	54.355	Gopherus_agassizii
ENSTNIG00000016716	mrpl1	86	52.893	ENSGGOG00000001304	MRPL1	98	45.794	Gorilla_gorilla
ENSTNIG00000016716	mrpl1	99	75.235	ENSHBUG00000004985	mrpl1	100	75.549	Haplochromis_burtoni
ENSTNIG00000016716	mrpl1	99	45.312	ENSHGLG00000006127	MRPL1	98	45.312	Heterocephalus_glaber_female
ENSTNIG00000016716	mrpl1	99	45.312	ENSHGLG00100004303	MRPL1	98	45.312	Heterocephalus_glaber_male
ENSTNIG00000016716	mrpl1	90	64.000	ENSIPUG00000009866	mrpl1	89	64.093	Ictalurus_punctatus
ENSTNIG00000016716	mrpl1	88	53.252	ENSSTOG00000001415	MRPL1	88	50.526	Ictidomys_tridecemlineatus
ENSTNIG00000016716	mrpl1	90	52.590	ENSJJAG00000012571	Mrpl1	91	47.973	Jaculus_jaculus
ENSTNIG00000016716	mrpl1	98	64.669	ENSKMAG00000004236	mrpl1	100	64.669	Kryptolebias_marmoratus
ENSTNIG00000016716	mrpl1	87	66.667	ENSLBEG00000017454	-	90	67.626	Labrus_bergylta
ENSTNIG00000016716	mrpl1	90	66.932	ENSLBEG00000013686	-	96	63.322	Labrus_bergylta
ENSTNIG00000016716	mrpl1	90	60.159	ENSLACG00000008208	MRPL1	93	55.556	Latimeria_chalumnae
ENSTNIG00000016716	mrpl1	97	58.654	ENSLOCG00000007408	mrpl1	97	58.654	Lepisosteus_oculatus
ENSTNIG00000016716	mrpl1	58	48.171	ENSMFAG00000030593	MRPL1	79	48.485	Macaca_fascicularis
ENSTNIG00000016716	mrpl1	93	47.212	ENSMLEG00000030203	MRPL1	95	46.350	Mandrillus_leucophaeus
ENSTNIG00000016716	mrpl1	99	73.981	ENSMAMG00000016943	mrpl1	99	73.981	Mastacembelus_armatus
ENSTNIG00000016716	mrpl1	99	75.862	ENSMZEG00005020288	mrpl1	100	75.862	Maylandia_zebra
ENSTNIG00000016716	mrpl1	78	52.752	ENSMGAG00000005136	MRPL1	85	52.966	Meleagris_gallopavo
ENSTNIG00000016716	mrpl1	97	40.221	ENSMAUG00000019228	Mrpl1	96	40.217	Mesocricetus_auratus
ENSTNIG00000016716	mrpl1	85	51.883	ENSMICG00000032729	-	93	51.653	Microcebus_murinus
ENSTNIG00000016716	mrpl1	92	50.190	ENSMOCG00000017395	Mrpl1	86	48.746	Microtus_ochrogaster
ENSTNIG00000016716	mrpl1	88	48.594	ENSMODG00000011704	MRPL1	89	48.425	Monodelphis_domestica
ENSTNIG00000016716	mrpl1	99	69.592	ENSMALG00000006393	mrpl1	99	69.592	Monopterus_albus
ENSTNIG00000016716	mrpl1	97	45.426	ENSMUSG00000029486	Mrpl1	96	45.231	Mus_musculus
ENSTNIG00000016716	mrpl1	97	47.319	MGP_PahariEiJ_G0017208	Mrpl1	96	47.077	Mus_pahari
ENSTNIG00000016716	mrpl1	97	45.714	MGP_SPRETEiJ_G0028427	Mrpl1	96	45.511	Mus_spretus
ENSTNIG00000016716	mrpl1	94	48.525	ENSMPUG00000006794	MRPL1	93	49.508	Mustela_putorius_furo
ENSTNIG00000016716	mrpl1	87	53.279	ENSNGAG00000015669	Mrpl1	88	49.643	Nannospalax_galili
ENSTNIG00000016716	mrpl1	99	74.608	ENSNBRG00000016660	mrpl1	100	74.608	Neolamprologus_brichardi
ENSTNIG00000016716	mrpl1	95	44.118	ENSODEG00000004206	MRPL1	95	44.660	Octodon_degus
ENSTNIG00000016716	mrpl1	99	76.087	ENSONIG00000014024	mrpl1	99	76.087	Oreochromis_niloticus
ENSTNIG00000016716	mrpl1	80	55.752	ENSOANG00000003564	MRPL1	80	55.752	Ornithorhynchus_anatinus
ENSTNIG00000016716	mrpl1	84	54.043	ENSOCUG00000003852	MRPL1	87	49.117	Oryctolagus_cuniculus
ENSTNIG00000016716	mrpl1	94	75.479	ENSORLG00000018859	mrpl1	94	71.521	Oryzias_latipes
ENSTNIG00000016716	mrpl1	91	75.494	ENSOMEG00000010049	mrpl1	97	69.355	Oryzias_melastigma
ENSTNIG00000016716	mrpl1	86	52.083	ENSOGAG00000012126	MRPL1	93	49.470	Otolemur_garnettii
ENSTNIG00000016716	mrpl1	86	52.893	ENSPPAG00000041378	MRPL1	98	46.106	Pan_paniscus
ENSTNIG00000016716	mrpl1	99	47.222	ENSPPRG00000009221	MRPL1	98	47.222	Panthera_pardus
ENSTNIG00000016716	mrpl1	99	47.222	ENSPTIG00000015465	MRPL1	98	47.222	Panthera_tigris_altaica
ENSTNIG00000016716	mrpl1	86	52.893	ENSPTRG00000016199	MRPL1	98	46.106	Pan_troglodytes
ENSTNIG00000016716	mrpl1	99	43.789	ENSPANG00000007832	MRPL1	98	43.925	Papio_anubis
ENSTNIG00000016716	mrpl1	94	60.741	ENSPKIG00000019299	mrpl1	95	57.006	Paramormyrops_kingsleyae
ENSTNIG00000016716	mrpl1	79	58.824	ENSPSIG00000015906	MRPL1	99	58.824	Pelodiscus_sinensis
ENSTNIG00000016716	mrpl1	88	69.880	ENSPMGG00000004020	mrpl1	94	62.857	Periophthalmus_magnuspinnatus
ENSTNIG00000016716	mrpl1	96	50.746	ENSPEMG00000018072	-	99	46.584	Peromyscus_maniculatus_bairdii
ENSTNIG00000016716	mrpl1	90	47.431	ENSPCIG00000029496	-	97	41.562	Phascolarctos_cinereus
ENSTNIG00000016716	mrpl1	99	68.224	ENSPFOG00000013095	mrpl1	98	69.159	Poecilia_formosa
ENSTNIG00000016716	mrpl1	99	68.025	ENSPLAG00000019871	mrpl1	99	68.966	Poecilia_latipinna
ENSTNIG00000016716	mrpl1	99	68.339	ENSPMEG00000015846	mrpl1	99	69.279	Poecilia_mexicana
ENSTNIG00000016716	mrpl1	99	66.144	ENSPREG00000003524	mrpl1	99	67.085	Poecilia_reticulata
ENSTNIG00000016716	mrpl1	82	54.348	ENSPPYG00000014870	MRPL1	98	46.729	Pongo_abelii
ENSTNIG00000016716	mrpl1	100	74.534	ENSPNYG00000006464	mrpl1	99	74.534	Pundamilia_nyererei
ENSTNIG00000016716	mrpl1	90	66.135	ENSPNAG00000018662	mrpl1	98	60.703	Pygocentrus_nattereri
ENSTNIG00000016716	mrpl1	93	51.538	ENSRNOG00000045785	LOC100359687	95	46.645	Rattus_norvegicus
ENSTNIG00000016716	mrpl1	99	47.040	ENSRNOG00000002070	Mrpl1	99	47.040	Rattus_norvegicus
ENSTNIG00000016716	mrpl1	99	44.860	ENSRBIG00000040801	MRPL1	98	44.860	Rhinopithecus_bieti
ENSTNIG00000016716	mrpl1	99	44.860	ENSRROG00000041586	MRPL1	98	44.860	Rhinopithecus_roxellana
ENSTNIG00000016716	mrpl1	99	43.865	ENSSHAG00000001696	MRPL1	98	44.237	Sarcophilus_harrisii
ENSTNIG00000016716	mrpl1	90	63.454	ENSSFOG00015014444	mrpl1	98	56.098	Scleropages_formosus
ENSTNIG00000016716	mrpl1	97	75.000	ENSSMAG00000015530	mrpl1	98	73.668	Scophthalmus_maximus
ENSTNIG00000016716	mrpl1	98	73.502	ENSSDUG00000018458	mrpl1	99	74.448	Seriola_dumerili
ENSTNIG00000016716	mrpl1	99	73.438	ENSSLDG00000000399	mrpl1	92	74.375	Seriola_lalandi_dorsalis
ENSTNIG00000016716	mrpl1	92	51.938	ENSSPUG00000002005	MRPL1	90	50.735	Sphenodon_punctatus
ENSTNIG00000016716	mrpl1	90	65.035	ENSSPAG00000022922	mrpl1	87	65.035	Stegastes_partitus
ENSTNIG00000016716	mrpl1	82	51.316	ENSTGUG00000001739	MRPL1	93	44.409	Taeniopygia_guttata
ENSTNIG00000016716	mrpl1	99	82.540	ENSTRUG00000004229	mrpl1	100	82.540	Takifugu_rubripes
ENSTNIG00000016716	mrpl1	91	50.787	ENSUMAG00000007973	MRPL1	91	54.251	Ursus_maritimus
ENSTNIG00000016716	mrpl1	89	62.903	ENSXETG00000000373	mrpl1	94	53.560	Xenopus_tropicalis
ENSTNIG00000016716	mrpl1	99	66.049	ENSXMAG00000002920	mrpl1	99	66.770	Xiphophorus_maculatus