EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016860 (Gene tree)
Gene ID: -
Gene Symbol: cstf2
Alias: CstF-64|fb11e07|wu:fb11e07|zgc:77730
Full Name: cleavage stimulation factor%2C 3' pre-RNA%2C subunit 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 8618 bases
Position: chr1:9295884-9304501
Accession: ZDB-GENE-031118-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019973	RRM_1	PF00076.22	9.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020204	-	1677	-	ENSTNIP00000019973	504 (aa)	-	H3DHH9

Gene Model

Click here to download ENSTNIG00000016860's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016860's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016860	cstf2	99	59.593	ENSG00000101811	CSTF2	83	89.785	Homo_sapiens
ENSTNIG00000016860	cstf2	99	86.028	ENSAPOG00000005630	cstf2	97	84.615	Acanthochromis_polyacanthus
ENSTNIG00000016860	cstf2	99	58.456	ENSAMEG00000002082	CSTF2	99	58.347	Ailuropoda_melanoleuca
ENSTNIG00000016860	cstf2	99	78.400	ENSACIG00000012852	cstf2	97	77.668	Amphilophus_citrinellus
ENSTNIG00000016860	cstf2	99	86.000	ENSAOCG00000020905	cstf2	97	84.813	Amphiprion_ocellaris
ENSTNIG00000016860	cstf2	99	86.200	ENSAPEG00000006526	cstf2	97	85.010	Amphiprion_percula
ENSTNIG00000016860	cstf2	99	80.237	ENSATEG00000018186	cstf2	97	81.800	Anabas_testudineus
ENSTNIG00000016860	cstf2	96	58.944	ENSAPLG00000007255	CSTF2	99	58.320	Anas_platyrhynchos
ENSTNIG00000016860	cstf2	99	59.162	ENSANAG00000022342	CSTF2	99	59.028	Aotus_nancymaae
ENSTNIG00000016860	cstf2	99	82.400	ENSACLG00000000779	cstf2	94	81.621	Astatotilapia_calliptera
ENSTNIG00000016860	cstf2	68	100.000	ENSAMXG00000021477	cstf2	96	100.000	Astyanax_mexicanus
ENSTNIG00000016860	cstf2	99	60.959	ENSBTAG00000003547	CSTF2	99	60.413	Bos_taurus
ENSTNIG00000016860	cstf2	99	59.345	ENSCJAG00000004422	CSTF2	99	58.254	Callithrix_jacchus
ENSTNIG00000016860	cstf2	99	59.328	ENSCAFG00000017551	CSTF2	99	58.992	Canis_familiaris
ENSTNIG00000016860	cstf2	99	58.621	ENSCAFG00020007619	CSTF2	99	58.292	Canis_lupus_dingo
ENSTNIG00000016860	cstf2	99	60.788	ENSCHIG00000016994	CSTF2	99	60.241	Capra_hircus
ENSTNIG00000016860	cstf2	99	58.754	ENSTSYG00000006529	CSTF2	99	58.081	Carlito_syrichta
ENSTNIG00000016860	cstf2	99	60.171	ENSCPOG00000015255	CSTF2	84	90.850	Cavia_porcellus
ENSTNIG00000016860	cstf2	99	59.337	ENSCCAG00000032975	CSTF2	99	59.201	Cebus_capucinus
ENSTNIG00000016860	cstf2	99	59.511	ENSCATG00000022835	CSTF2	99	59.304	Cercocebus_atys
ENSTNIG00000016860	cstf2	99	59.222	ENSCLAG00000001904	CSTF2	85	89.103	Chinchilla_lanigera
ENSTNIG00000016860	cstf2	99	57.895	ENSCSAG00000010360	CSTF2	99	57.401	Chlorocebus_sabaeus
ENSTNIG00000016860	cstf2	99	66.897	ENSCPBG00000014293	CSTF2	91	69.104	Chrysemys_picta_bellii
ENSTNIG00000016860	cstf2	99	59.511	ENSCANG00000030612	CSTF2	99	59.304	Colobus_angolensis_palliatus
ENSTNIG00000016860	cstf2	99	58.803	ENSCGRG00001023023	Cstf2	99	59.694	Cricetulus_griseus_chok1gshd
ENSTNIG00000016860	cstf2	99	61.131	ENSCGRG00000003897	Cstf2	99	61.687	Cricetulus_griseus_crigri
ENSTNIG00000016860	cstf2	99	81.460	ENSCVAG00000005731	cstf2	97	80.545	Cyprinodon_variegatus
ENSTNIG00000016860	cstf2	98	71.346	ENSDARG00000090788	cstf2	91	100.000	Danio_rerio
ENSTNIG00000016860	cstf2	99	59.796	ENSDORG00000007195	Cstf2	83	91.391	Dipodomys_ordii
ENSTNIG00000016860	cstf2	75	85.965	ENSETEG00000004931	CSTF2	65	85.965	Echinops_telfairi
ENSTNIG00000016860	cstf2	99	58.717	ENSEASG00005001216	CSTF2	99	58.224	Equus_asinus_asinus
ENSTNIG00000016860	cstf2	99	58.717	ENSECAG00000009325	CSTF2	99	59.762	Equus_caballus
ENSTNIG00000016860	cstf2	99	59.191	ENSFCAG00000007000	CSTF2	99	58.883	Felis_catus
ENSTNIG00000016860	cstf2	91	57.143	ENSFALG00000003859	CSTF2	100	57.193	Ficedula_albicollis
ENSTNIG00000016860	cstf2	99	59.083	ENSFDAG00000002416	CSTF2	99	59.655	Fukomys_damarensis
ENSTNIG00000016860	cstf2	99	79.572	ENSFHEG00000017065	cstf2	94	78.736	Fundulus_heteroclitus
ENSTNIG00000016860	cstf2	99	73.200	ENSGMOG00000005145	cstf2	100	74.349	Gadus_morhua
ENSTNIG00000016860	cstf2	99	60.642	ENSGALG00000006760	CSTF2	99	61.856	Gallus_gallus
ENSTNIG00000016860	cstf2	99	73.489	ENSGAFG00000020027	cstf2	97	76.265	Gambusia_affinis
ENSTNIG00000016860	cstf2	99	79.492	ENSGACG00000017326	cstf2	97	80.273	Gasterosteus_aculeatus
ENSTNIG00000016860	cstf2	99	58.044	ENSGAGG00000006037	CSTF2	99	59.121	Gopherus_agassizii
ENSTNIG00000016860	cstf2	99	60.103	ENSGGOG00000022267	CSTF2	99	59.589	Gorilla_gorilla
ENSTNIG00000016860	cstf2	99	82.470	ENSHBUG00000016183	cstf2	94	81.890	Haplochromis_burtoni
ENSTNIG00000016860	cstf2	99	60.342	ENSHGLG00000000659	-	86	87.654	Heterocephalus_glaber_female
ENSTNIG00000016860	cstf2	99	53.913	ENSHGLG00000013455	-	99	53.565	Heterocephalus_glaber_female
ENSTNIG00000016860	cstf2	99	60.342	ENSHGLG00100001130	-	86	87.654	Heterocephalus_glaber_male
ENSTNIG00000016860	cstf2	99	54.087	ENSHGLG00100015391	-	99	53.739	Heterocephalus_glaber_male
ENSTNIG00000016860	cstf2	99	78.926	ENSHCOG00000005157	cstf2	98	77.864	Hippocampus_comes
ENSTNIG00000016860	cstf2	99	69.118	ENSIPUG00000017839	cstf2	98	71.402	Ictalurus_punctatus
ENSTNIG00000016860	cstf2	99	61.034	ENSSTOG00000023445	CSTF2	85	89.103	Ictidomys_tridecemlineatus
ENSTNIG00000016860	cstf2	99	59.898	ENSJJAG00000020507	Cstf2	85	89.103	Jaculus_jaculus
ENSTNIG00000016860	cstf2	67	95.000	ENSLBEG00000028720	cstf2	95	89.231	Labrus_bergylta
ENSTNIG00000016860	cstf2	99	60.840	ENSLACG00000015927	CSTF2	99	60.168	Latimeria_chalumnae
ENSTNIG00000016860	cstf2	98	86.567	ENSLOCG00000015300	cstf2	84	86.567	Lepisosteus_oculatus
ENSTNIG00000016860	cstf2	99	59.046	ENSLAFG00000000474	CSTF2	99	60.102	Loxodonta_africana
ENSTNIG00000016860	cstf2	99	59.511	ENSMFAG00000043888	CSTF2	99	59.304	Macaca_fascicularis
ENSTNIG00000016860	cstf2	99	59.511	ENSMMUG00000013008	CSTF2	99	59.304	Macaca_mulatta
ENSTNIG00000016860	cstf2	99	59.511	ENSMNEG00000041824	CSTF2	99	59.304	Macaca_nemestrina
ENSTNIG00000016860	cstf2	99	59.511	ENSMLEG00000036870	CSTF2	99	59.304	Mandrillus_leucophaeus
ENSTNIG00000016860	cstf2	96	83.539	ENSMAMG00000020364	cstf2	96	83.745	Mastacembelus_armatus
ENSTNIG00000016860	cstf2	99	82.400	ENSMZEG00005007200	cstf2	97	81.460	Maylandia_zebra
ENSTNIG00000016860	cstf2	88	70.370	ENSMGAG00000004139	CSTF2	100	57.026	Meleagris_gallopavo
ENSTNIG00000016860	cstf2	99	57.966	ENSMAUG00000000965	Cstf2	99	59.253	Mesocricetus_auratus
ENSTNIG00000016860	cstf2	99	60.616	ENSMICG00000014121	CSTF2	99	60.757	Microcebus_murinus
ENSTNIG00000016860	cstf2	99	58.874	ENSMOCG00000008081	Cstf2	99	59.829	Microtus_ochrogaster
ENSTNIG00000016860	cstf2	99	73.600	ENSMMOG00000000538	cstf2	97	72.638	Mola_mola
ENSTNIG00000016860	cstf2	99	59.664	ENSMODG00000011785	CSTF2	99	61.242	Monodelphis_domestica
ENSTNIG00000016860	cstf2	99	59.044	MGP_CAROLIEiJ_G0033383	Cstf2	84	90.323	Mus_caroli
ENSTNIG00000016860	cstf2	99	59.044	ENSMUSG00000031256	Cstf2	84	90.323	Mus_musculus
ENSTNIG00000016860	cstf2	99	59.556	MGP_PahariEiJ_G0031923	Cstf2	99	60.959	Mus_pahari
ENSTNIG00000016860	cstf2	99	58.874	MGP_SPRETEiJ_G0034548	Cstf2	84	90.323	Mus_spretus
ENSTNIG00000016860	cstf2	99	55.259	ENSMPUG00000002339	CSTF2	99	54.945	Mustela_putorius_furo
ENSTNIG00000016860	cstf2	99	53.395	ENSMLUG00000004598	CSTF2	98	54.488	Myotis_lucifugus
ENSTNIG00000016860	cstf2	99	59.560	ENSNGAG00000021985	Cstf2	99	59.932	Nannospalax_galili
ENSTNIG00000016860	cstf2	95	74.481	ENSNBRG00000021694	cstf2	100	75.983	Neolamprologus_brichardi
ENSTNIG00000016860	cstf2	99	59.337	ENSNLEG00000007510	CSTF2	99	59.130	Nomascus_leucogenys
ENSTNIG00000016860	cstf2	90	59.690	ENSMEUG00000014025	-	100	61.448	Notamacropus_eugenii
ENSTNIG00000016860	cstf2	80	66.509	ENSMEUG00000007875	-	99	62.567	Notamacropus_eugenii
ENSTNIG00000016860	cstf2	99	60.595	ENSMEUG00000011186	-	99	63.766	Notamacropus_eugenii
ENSTNIG00000016860	cstf2	87	71.163	ENSOPRG00000003106	CSTF2	81	73.077	Ochotona_princeps
ENSTNIG00000016860	cstf2	99	58.883	ENSODEG00000002059	CSTF2	99	58.703	Octodon_degus
ENSTNIG00000016860	cstf2	86	70.161	ENSONIG00000002631	cstf2	80	71.457	Oreochromis_niloticus
ENSTNIG00000016860	cstf2	87	86.275	ENSOANG00000004208	CSTF2	72	87.719	Ornithorhynchus_anatinus
ENSTNIG00000016860	cstf2	99	58.249	ENSOCUG00000010468	CSTF2	99	58.516	Oryctolagus_cuniculus
ENSTNIG00000016860	cstf2	98	79.840	ENSORLG00000001380	cstf2	97	79.487	Oryzias_latipes
ENSTNIG00000016860	cstf2	98	80.240	ENSORLG00020021917	cstf2	97	79.882	Oryzias_latipes_hni
ENSTNIG00000016860	cstf2	98	80.040	ENSORLG00015011996	cstf2	97	79.684	Oryzias_latipes_hsok
ENSTNIG00000016860	cstf2	98	82.704	ENSOMEG00000015507	cstf2	97	82.745	Oryzias_melastigma
ENSTNIG00000016860	cstf2	99	54.003	ENSOGAG00000011192	CSTF2	99	54.003	Otolemur_garnettii
ENSTNIG00000016860	cstf2	99	60.788	ENSOARG00000001022	CSTF2	99	60.241	Ovis_aries
ENSTNIG00000016860	cstf2	99	60.103	ENSPPAG00000031804	CSTF2	99	59.589	Pan_paniscus
ENSTNIG00000016860	cstf2	99	59.191	ENSPPRG00000022492	CSTF2	99	58.883	Panthera_pardus
ENSTNIG00000016860	cstf2	99	58.853	ENSPTIG00000009922	CSTF2	99	58.545	Panthera_tigris_altaica
ENSTNIG00000016860	cstf2	99	60.103	ENSPTRG00000022090	CSTF2	99	59.589	Pan_troglodytes
ENSTNIG00000016860	cstf2	99	59.511	ENSPANG00000002303	CSTF2	99	59.304	Papio_anubis
ENSTNIG00000016860	cstf2	99	72.115	ENSPKIG00000005033	cstf2	97	68.738	Paramormyrops_kingsleyae
ENSTNIG00000016860	cstf2	99	81.213	ENSPMGG00000006534	cstf2	96	81.000	Periophthalmus_magnuspinnatus
ENSTNIG00000016860	cstf2	99	58.136	ENSPEMG00000019415	Cstf2	99	58.685	Peromyscus_maniculatus_bairdii
ENSTNIG00000016860	cstf2	80	68.119	ENSPCIG00000002989	CSTF2	99	61.102	Phascolarctos_cinereus
ENSTNIG00000016860	cstf2	99	73.643	ENSPMEG00000017743	cstf2	97	74.904	Poecilia_mexicana
ENSTNIG00000016860	cstf2	65	82.515	ENSPREG00000011481	cstf2	98	72.875	Poecilia_reticulata
ENSTNIG00000016860	cstf2	99	58.059	ENSPPYG00000020541	CSTF2	99	57.401	Pongo_abelii
ENSTNIG00000016860	cstf2	99	59.441	ENSPCOG00000027744	CSTF2	99	59.686	Propithecus_coquereli
ENSTNIG00000016860	cstf2	96	48.070	ENSPVAG00000008342	CSTF2	100	47.285	Pteropus_vampyrus
ENSTNIG00000016860	cstf2	54	93.151	ENSPNYG00000010852	cstf2	96	87.342	Pundamilia_nyererei
ENSTNIG00000016860	cstf2	99	71.536	ENSPNAG00000018887	cstf2	97	72.846	Pygocentrus_nattereri
ENSTNIG00000016860	cstf2	99	59.794	ENSRNOG00000048025	Cstf2	99	60.513	Rattus_norvegicus
ENSTNIG00000016860	cstf2	99	59.649	ENSRBIG00000030745	CSTF2	99	59.441	Rhinopithecus_bieti
ENSTNIG00000016860	cstf2	99	59.511	ENSRROG00000045042	CSTF2	99	59.304	Rhinopithecus_roxellana
ENSTNIG00000016860	cstf2	99	59.337	ENSSBOG00000021649	CSTF2	99	59.201	Saimiri_boliviensis_boliviensis
ENSTNIG00000016860	cstf2	89	84.314	ENSSHAG00000003681	CSTF2	72	85.965	Sarcophilus_harrisii
ENSTNIG00000016860	cstf2	99	73.603	ENSSFOG00015006348	cstf2	98	73.034	Scleropages_formosus
ENSTNIG00000016860	cstf2	99	82.329	ENSSMAG00000013463	cstf2	97	82.738	Scophthalmus_maximus
ENSTNIG00000016860	cstf2	80	65.747	ENSSPUG00000005288	-	58	81.181	Sphenodon_punctatus
ENSTNIG00000016860	cstf2	99	61.274	ENSSSCG00000012486	CSTF2	99	60.757	Sus_scrofa
ENSTNIG00000016860	cstf2	99	59.174	ENSTGUG00000002253	CSTF2	99	61.008	Taeniopygia_guttata
ENSTNIG00000016860	cstf2	51	98.780	ENSTBEG00000010029	-	68	98.780	Tupaia_belangeri
ENSTNIG00000016860	cstf2	99	60.580	ENSTTRG00000013556	CSTF2	99	60.068	Tursiops_truncatus
ENSTNIG00000016860	cstf2	99	58.992	ENSUAMG00000026605	CSTF2	99	58.655	Ursus_americanus
ENSTNIG00000016860	cstf2	99	62.970	ENSUMAG00000012417	CSTF2	99	62.612	Ursus_maritimus
ENSTNIG00000016860	cstf2	75	71.848	ENSVPAG00000006466	CSTF2	68	70.968	Vicugna_pacos
ENSTNIG00000016860	cstf2	99	59.160	ENSVVUG00000004717	CSTF2	99	58.824	Vulpes_vulpes
ENSTNIG00000016860	cstf2	93	89.474	ENSXETG00000009642	cstf2	85	89.474	Xenopus_tropicalis
ENSTNIG00000016860	cstf2	68	98.485	ENSXCOG00000016436	cstf2	93	92.958	Xiphophorus_couchianus
ENSTNIG00000016860	cstf2	65	81.595	ENSXMAG00000013524	cstf2	98	72.395	Xiphophorus_maculatus