EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016866 (Gene tree)
Gene ID: -
Gene Symbol: trmt12
Alias: zgc:153361
Full Name: tRNA methyltransferase 12 homolog
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 2327 bases
Position: chr1:9354168-9356494
Accession: ZDB-GENE-060825-182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000019979	MTS	PF05175.14	2.7e-05	1	1
ENSTNIP00000019979	Met_10	PF02475.16	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020210	-	1230	-	ENSTNIP00000019979	410 (aa)	-	H3DHI5

Gene Model

Click here to download ENSTNIG00000016866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016866	trmt12	88	53.247	ENSG00000183665	TRMT12	86	53.247	Homo_sapiens
ENSTNIG00000016866	trmt12	99	67.734	ENSAPOG00000011979	trmt12	99	67.734	Acanthochromis_polyacanthus
ENSTNIG00000016866	trmt12	97	50.000	ENSAMEG00000019612	TRMT12	93	50.000	Ailuropoda_melanoleuca
ENSTNIG00000016866	trmt12	88	71.271	ENSACIG00000012982	trmt12	94	71.271	Amphilophus_citrinellus
ENSTNIG00000016866	trmt12	99	68.059	ENSAOCG00000020570	trmt12	98	69.895	Amphiprion_ocellaris
ENSTNIG00000016866	trmt12	99	69.042	ENSAPEG00000006335	trmt12	98	70.942	Amphiprion_percula
ENSTNIG00000016866	trmt12	99	66.585	ENSATEG00000018316	trmt12	99	66.585	Anabas_testudineus
ENSTNIG00000016866	trmt12	99	65.842	ENSACLG00000001008	trmt12	99	65.842	Astatotilapia_calliptera
ENSTNIG00000016866	trmt12	99	56.308	ENSAMXG00000040366	trmt12	99	56.308	Astyanax_mexicanus
ENSTNIG00000016866	trmt12	97	50.119	ENSBTAG00000020398	TRMT12	90	50.119	Bos_taurus
ENSTNIG00000016866	trmt12	96	48.565	ENSCJAG00000022174	TRMT12	93	48.565	Callithrix_jacchus
ENSTNIG00000016866	trmt12	97	48.578	ENSCAFG00000001040	TRMT12	95	48.578	Canis_familiaris
ENSTNIG00000016866	trmt12	97	48.578	ENSCAFG00020006500	TRMT12	95	48.578	Canis_lupus_dingo
ENSTNIG00000016866	trmt12	96	50.360	ENSCHIG00000016574	TRMT12	95	50.360	Capra_hircus
ENSTNIG00000016866	trmt12	96	49.760	ENSCPOG00000026520	TRMT12	93	49.760	Cavia_porcellus
ENSTNIG00000016866	trmt12	97	49.526	ENSCSAG00000018615	TRMT12	93	49.526	Chlorocebus_sabaeus
ENSTNIG00000016866	trmt12	99	47.991	ENSCPBG00000014290	TRMT12	97	47.991	Chrysemys_picta_bellii
ENSTNIG00000016866	trmt12	70	47.959	ENSCING00000019633	-	97	47.959	Ciona_intestinalis
ENSTNIG00000016866	trmt12	75	48.208	ENSCSAVG00000000415	-	97	48.208	Ciona_savignyi
ENSTNIG00000016866	trmt12	73	57.329	ENSCGRG00001014834	Trmt12	95	48.642	Cricetulus_griseus_chok1gshd
ENSTNIG00000016866	trmt12	99	62.195	ENSCSEG00000002675	trmt12	95	62.195	Cynoglossus_semilaevis
ENSTNIG00000016866	trmt12	99	65.356	ENSCVAG00000005590	trmt12	99	65.848	Cyprinodon_variegatus
ENSTNIG00000016866	trmt12	99	55.206	ENSDARG00000060338	trmt12	99	55.206	Danio_rerio
ENSTNIG00000016866	trmt12	84	51.213	ENSETEG00000009373	TRMT12	83	51.213	Echinops_telfairi
ENSTNIG00000016866	trmt12	97	48.815	ENSEASG00005022441	TRMT12	95	48.815	Equus_asinus_asinus
ENSTNIG00000016866	trmt12	98	48.471	ENSEEUG00000004844	TRMT12	95	48.471	Erinaceus_europaeus
ENSTNIG00000016866	trmt12	99	59.024	ENSELUG00000004240	trmt12	97	62.022	Esox_lucius
ENSTNIG00000016866	trmt12	64	55.439	ENSFALG00000003825	TRMT12	99	60.455	Ficedula_albicollis
ENSTNIG00000016866	trmt12	100	47.126	ENSFDAG00000016647	TRMT12	98	47.126	Fukomys_damarensis
ENSTNIG00000016866	trmt12	88	62.534	ENSFHEG00000017338	trmt12	92	62.534	Fundulus_heteroclitus
ENSTNIG00000016866	trmt12	80	55.714	ENSGALG00000006773	TRMT12	76	55.714	Gallus_gallus
ENSTNIG00000016866	trmt12	99	64.109	ENSGAFG00000020056	trmt12	99	64.109	Gambusia_affinis
ENSTNIG00000016866	trmt12	88	67.127	ENSGACG00000017351	trmt12	93	67.127	Gasterosteus_aculeatus
ENSTNIG00000016866	trmt12	99	49.324	ENSGAGG00000006032	TRMT12	99	49.324	Gopherus_agassizii
ENSTNIG00000016866	trmt12	99	65.594	ENSHBUG00000016412	trmt12	99	65.594	Haplochromis_burtoni
ENSTNIG00000016866	trmt12	97	48.341	ENSHGLG00000020498	TRMT12	95	48.341	Heterocephalus_glaber_female
ENSTNIG00000016866	trmt12	97	48.341	ENSHGLG00100020132	TRMT12	95	48.341	Heterocephalus_glaber_male
ENSTNIG00000016866	trmt12	99	61.386	ENSHCOG00000005050	trmt12	95	67.781	Hippocampus_comes
ENSTNIG00000016866	trmt12	99	54.612	ENSIPUG00000018011	trmt12	92	54.612	Ictalurus_punctatus
ENSTNIG00000016866	trmt12	97	49.406	ENSSTOG00000030617	TRMT12	96	48.946	Ictidomys_tridecemlineatus
ENSTNIG00000016866	trmt12	99	65.679	ENSKMAG00000000891	trmt12	99	65.679	Kryptolebias_marmoratus
ENSTNIG00000016866	trmt12	51	75.234	ENSLBEG00000017456	-	87	75.234	Labrus_bergylta
ENSTNIG00000016866	trmt12	99	62.745	ENSLBEG00000028712	trmt12	99	62.745	Labrus_bergylta
ENSTNIG00000016866	trmt12	96	48.951	ENSLACG00000015869	TRMT12	94	48.951	Latimeria_chalumnae
ENSTNIG00000016866	trmt12	99	53.155	ENSLOCG00000015290	trmt12	99	53.155	Lepisosteus_oculatus
ENSTNIG00000016866	trmt12	96	48.804	ENSLAFG00000012519	TRMT12	95	48.804	Loxodonta_africana
ENSTNIG00000016866	trmt12	97	49.289	ENSMMUG00000015490	TRMT12	93	49.289	Macaca_mulatta
ENSTNIG00000016866	trmt12	99	66.422	ENSMAMG00000020311	trmt12	99	66.422	Mastacembelus_armatus
ENSTNIG00000016866	trmt12	99	65.594	ENSMZEG00005007349	trmt12	99	65.594	Maylandia_zebra
ENSTNIG00000016866	trmt12	98	48.349	ENSMGAG00000004174	TRMT12	95	48.349	Meleagris_gallopavo
ENSTNIG00000016866	trmt12	99	67.073	ENSMMOG00000000412	trmt12	99	67.073	Mola_mola
ENSTNIG00000016866	trmt12	88	51.344	ENSMODG00000011798	-	78	51.344	Monodelphis_domestica
ENSTNIG00000016866	trmt12	96	50.370	ENSMODG00000021403	-	93	50.370	Monodelphis_domestica
ENSTNIG00000016866	trmt12	99	66.585	ENSMALG00000008668	trmt12	99	66.585	Monopterus_albus
ENSTNIG00000016866	trmt12	100	47.005	MGP_CAROLIEiJ_G0019820	Trmt12	97	47.005	Mus_caroli
ENSTNIG00000016866	trmt12	100	47.926	ENSMUSG00000037085	Trmt12	97	47.926	Mus_musculus
ENSTNIG00000016866	trmt12	100	48.387	MGP_PahariEiJ_G0019829	Trmt12	97	48.387	Mus_pahari
ENSTNIG00000016866	trmt12	100	47.696	MGP_SPRETEiJ_G0020717	Trmt12	97	47.696	Mus_spretus
ENSTNIG00000016866	trmt12	97	49.052	ENSMPUG00000019150	TRMT12	93	49.052	Mustela_putorius_furo
ENSTNIG00000016866	trmt12	96	49.043	ENSMLUG00000003753	TRMT12	95	49.043	Myotis_lucifugus
ENSTNIG00000016866	trmt12	96	47.608	ENSNGAG00000014548	Trmt12	95	47.608	Nannospalax_galili
ENSTNIG00000016866	trmt12	99	65.099	ENSNBRG00000021510	trmt12	99	65.099	Neolamprologus_brichardi
ENSTNIG00000016866	trmt12	97	45.368	ENSOPRG00000008067	TRMT12	93	45.368	Ochotona_princeps
ENSTNIG00000016866	trmt12	97	49.052	ENSODEG00000018933	TRMT12	95	49.052	Octodon_degus
ENSTNIG00000016866	trmt12	99	66.337	ENSONIG00000002614	trmt12	99	66.337	Oreochromis_niloticus
ENSTNIG00000016866	trmt12	96	43.447	ENSOANG00000009987	TRMT12	96	43.447	Ornithorhynchus_anatinus
ENSTNIG00000016866	trmt12	78	53.438	ENSOCUG00000026379	TRMT12	70	53.438	Oryctolagus_cuniculus
ENSTNIG00000016866	trmt12	99	66.089	ENSORLG00000001280	trmt12	99	66.337	Oryzias_latipes
ENSTNIG00000016866	trmt12	99	65.842	ENSORLG00020000708	trmt12	99	66.089	Oryzias_latipes_hni
ENSTNIG00000016866	trmt12	99	65.842	ENSORLG00015012344	trmt12	99	65.842	Oryzias_latipes_hsok
ENSTNIG00000016866	trmt12	99	63.366	ENSOMEG00000015267	trmt12	98	63.366	Oryzias_melastigma
ENSTNIG00000016866	trmt12	96	49.043	ENSOGAG00000015845	TRMT12	95	49.043	Otolemur_garnettii
ENSTNIG00000016866	trmt12	99	55.283	ENSPKIG00000004640	trmt12	99	55.283	Paramormyrops_kingsleyae
ENSTNIG00000016866	trmt12	57	57.249	ENSPSIG00000003476	TRMT12	99	57.249	Pelodiscus_sinensis
ENSTNIG00000016866	trmt12	99	62.255	ENSPMGG00000016356	trmt12	97	62.255	Periophthalmus_magnuspinnatus
ENSTNIG00000016866	trmt12	96	48.642	ENSPCIG00000002967	TRMT12	85	48.642	Phascolarctos_cinereus
ENSTNIG00000016866	trmt12	88	69.061	ENSPFOG00000016931	trmt12	88	69.061	Poecilia_formosa
ENSTNIG00000016866	trmt12	99	64.851	ENSPLAG00000020621	trmt12	99	64.851	Poecilia_latipinna
ENSTNIG00000016866	trmt12	99	66.584	ENSPMEG00000000818	trmt12	99	66.584	Poecilia_mexicana
ENSTNIG00000016866	trmt12	99	65.594	ENSPREG00000011621	trmt12	99	65.594	Poecilia_reticulata
ENSTNIG00000016866	trmt12	97	50.000	ENSPPYG00000018866	TRMT12	93	50.000	Pongo_abelii
ENSTNIG00000016866	trmt12	96	48.804	ENSPCAG00000000556	TRMT12	93	48.804	Procavia_capensis
ENSTNIG00000016866	trmt12	97	48.341	ENSPVAG00000009149	TRMT12	93	48.341	Pteropus_vampyrus
ENSTNIG00000016866	trmt12	88	68.785	ENSPNYG00000010696	trmt12	94	68.785	Pundamilia_nyererei
ENSTNIG00000016866	trmt12	99	53.682	ENSPNAG00000019028	trmt12	99	53.682	Pygocentrus_nattereri
ENSTNIG00000016866	trmt12	100	47.696	ENSRNOG00000008978	Trmt12	99	47.696	Rattus_norvegicus
ENSTNIG00000016866	trmt12	96	49.392	ENSSHAG00000003345	TRMT12	92	49.392	Sarcophilus_harrisii
ENSTNIG00000016866	trmt12	99	50.957	ENSSFOG00015006090	trmt12	99	50.957	Scleropages_formosus
ENSTNIG00000016866	trmt12	99	67.734	ENSSMAG00000013247	trmt12	99	67.734	Scophthalmus_maximus
ENSTNIG00000016866	trmt12	99	69.512	ENSSDUG00000006168	trmt12	99	69.512	Seriola_dumerili
ENSTNIG00000016866	trmt12	99	70.516	ENSSLDG00000025007	trmt12	99	70.516	Seriola_lalandi_dorsalis
ENSTNIG00000016866	trmt12	99	45.578	ENSSPUG00000005321	TRMT12	97	45.578	Sphenodon_punctatus
ENSTNIG00000016866	trmt12	99	70.025	ENSSPAG00000009435	trmt12	97	70.025	Stegastes_partitus
ENSTNIG00000016866	trmt12	98	47.857	ENSTGUG00000002280	TRMT12	99	48.571	Taeniopygia_guttata
ENSTNIG00000016866	trmt12	99	75.743	ENSTRUG00000011548	trmt12	99	75.743	Takifugu_rubripes
ENSTNIG00000016866	trmt12	97	49.289	ENSUAMG00000002067	TRMT12	95	49.289	Ursus_americanus
ENSTNIG00000016866	trmt12	97	49.526	ENSVPAG00000006519	TRMT12	93	49.526	Vicugna_pacos
ENSTNIG00000016866	trmt12	97	48.104	ENSVVUG00000016790	TRMT12	93	48.104	Vulpes_vulpes
ENSTNIG00000016866	trmt12	96	49.370	ENSXETG00000009641	trmt12	93	49.370	Xenopus_tropicalis
ENSTNIG00000016866	trmt12	99	64.039	ENSXCOG00000016505	trmt12	99	64.039	Xiphophorus_couchianus
ENSTNIG00000016866	trmt12	99	64.198	ENSXMAG00000025318	trmt12	99	64.198	Xiphophorus_maculatus