EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000016983 (Gene tree)
Gene ID: -
Gene Symbol: pum1
Alias: fb96a03|si:ch211-285e16.1|wu:fb96a03|wu:fb96a08|zgc:63671
Full Name: pumilio RNA-binding family member 1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 11421 bases
Position: chr21:1189490-1200910
Accession: ZDB-GENE-030131-2074
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	1	8
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	2	8
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	3	8
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	4	8
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	5	8
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	6	8
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	7	8
ENSTNIP00000020106	PUF	PF00806.19	2.4e-68	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020337	-	3525	-	ENSTNIP00000020106	1174 (aa)	-	H3DHW2

Gene Model

Click here to download ENSTNIG00000016983's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000016983's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000016983	pum1	93	90.865	ENSG00000134644	PUM1	99	91.346	Homo_sapiens
ENSTNIG00000016983	pum1	99	97.009	ENSAPOG00000021632	pum1	100	99.279	Acanthochromis_polyacanthus
ENSTNIG00000016983	pum1	100	76.733	ENSAMEG00000017656	PUM1	97	74.711	Ailuropoda_melanoleuca
ENSTNIG00000016983	pum1	99	95.983	ENSACIG00000021013	pum1	100	95.983	Amphilophus_citrinellus
ENSTNIG00000016983	pum1	99	97.009	ENSAOCG00000003944	pum1	100	97.009	Amphiprion_ocellaris
ENSTNIG00000016983	pum1	99	97.009	ENSAPEG00000014550	pum1	100	97.009	Amphiprion_percula
ENSTNIG00000016983	pum1	99	96.667	ENSATEG00000016004	pum1	100	96.667	Anabas_testudineus
ENSTNIG00000016983	pum1	99	77.280	ENSAPLG00000009351	PUM1	100	75.166	Anas_platyrhynchos
ENSTNIG00000016983	pum1	99	76.738	ENSACAG00000000682	PUM1	98	76.349	Anolis_carolinensis
ENSTNIG00000016983	pum1	93	90.625	ENSANAG00000027865	PUM1	100	91.106	Aotus_nancymaae
ENSTNIG00000016983	pum1	91	97.092	ENSACLG00000019354	pum1	100	97.092	Astatotilapia_calliptera
ENSTNIG00000016983	pum1	93	91.346	ENSBTAG00000018979	PUM1	100	91.827	Bos_taurus
ENSTNIG00000016983	pum1	93	90.865	ENSCJAG00000006035	PUM1	100	91.346	Callithrix_jacchus
ENSTNIG00000016983	pum1	92	78.131	ENSCAFG00020024616	PUM1	98	80.841	Canis_lupus_dingo
ENSTNIG00000016983	pum1	93	90.865	ENSCHIG00000012952	PUM1	100	91.346	Capra_hircus
ENSTNIG00000016983	pum1	99	76.617	ENSTSYG00000008868	PUM1	100	82.212	Carlito_syrichta
ENSTNIG00000016983	pum1	99	76.368	ENSCPOG00000031613	PUM1	100	80.593	Cavia_porcellus
ENSTNIG00000016983	pum1	93	91.346	ENSCATG00000017991	PUM1	93	91.827	Cercocebus_atys
ENSTNIG00000016983	pum1	93	90.625	ENSCLAG00000007662	PUM1	100	91.106	Chinchilla_lanigera
ENSTNIG00000016983	pum1	99	75.678	ENSCSAG00000001028	PUM1	100	73.663	Chlorocebus_sabaeus
ENSTNIG00000016983	pum1	93	66.337	ENSCHOG00000010245	PUM1	93	65.542	Choloepus_hoffmanni
ENSTNIG00000016983	pum1	99	76.802	ENSCPBG00000009288	PUM1	100	81.088	Chrysemys_picta_bellii
ENSTNIG00000016983	pum1	93	90.865	ENSCANG00000042606	PUM1	100	91.346	Colobus_angolensis_palliatus
ENSTNIG00000016983	pum1	99	76.412	ENSCGRG00001024949	Pum1	100	80.470	Cricetulus_griseus_chok1gshd
ENSTNIG00000016983	pum1	99	76.412	ENSCGRG00000014197	Pum1	100	80.470	Cricetulus_griseus_crigri
ENSTNIG00000016983	pum1	91	96.067	ENSCSEG00000015981	pum1	100	96.067	Cynoglossus_semilaevis
ENSTNIG00000016983	pum1	99	94.957	ENSCVAG00000007043	pum1	100	95.556	Cyprinodon_variegatus
ENSTNIG00000016983	pum1	99	83.067	ENSDARG00000099256	pum1	100	80.390	Danio_rerio
ENSTNIG00000016983	pum1	99	76.949	ENSDNOG00000010939	PUM1	100	75.083	Dasypus_novemcinctus
ENSTNIG00000016983	pum1	89	72.719	ENSETEG00000004355	PUM1	87	71.030	Echinops_telfairi
ENSTNIG00000016983	pum1	99	76.846	ENSEASG00005010813	PUM1	100	74.813	Equus_asinus_asinus
ENSTNIG00000016983	pum1	99	76.700	ENSECAG00000021369	PUM1	100	74.668	Equus_caballus
ENSTNIG00000016983	pum1	76	90.466	ENSEEUG00000003871	PUM1	75	90.909	Erinaceus_europaeus
ENSTNIG00000016983	pum1	99	89.134	ENSELUG00000002409	pum1	100	89.277	Esox_lucius
ENSTNIG00000016983	pum1	99	76.700	ENSFCAG00000010374	PUM1	100	80.841	Felis_catus
ENSTNIG00000016983	pum1	99	76.917	ENSFALG00000001214	PUM1	97	74.979	Ficedula_albicollis
ENSTNIG00000016983	pum1	99	76.368	ENSFDAG00000011319	PUM1	100	80.593	Fukomys_damarensis
ENSTNIG00000016983	pum1	96	89.960	ENSGALG00000042598	PUM1	99	89.960	Gallus_gallus
ENSTNIG00000016983	pum1	99	96.068	ENSGAFG00000015617	pum1	100	97.837	Gambusia_affinis
ENSTNIG00000016983	pum1	99	94.854	ENSGACG00000005717	pum1	100	95.197	Gasterosteus_aculeatus
ENSTNIG00000016983	pum1	96	90.161	ENSGAGG00000001290	PUM1	99	90.161	Gopherus_agassizii
ENSTNIG00000016983	pum1	93	90.865	ENSGGOG00000011983	PUM1	100	91.346	Gorilla_gorilla
ENSTNIG00000016983	pum1	99	96.325	ENSHBUG00000018718	pum1	100	96.325	Haplochromis_burtoni
ENSTNIG00000016983	pum1	99	76.202	ENSHGLG00000013819	Pum1	100	80.346	Heterocephalus_glaber_female
ENSTNIG00000016983	pum1	99	76.202	ENSHGLG00100008621	Pum1	100	80.346	Heterocephalus_glaber_male
ENSTNIG00000016983	pum1	91	89.316	ENSHCOG00000005149	pum1	100	88.660	Hippocampus_comes
ENSTNIG00000016983	pum1	99	80.721	ENSIPUG00000020421	pum1	100	80.553	Ictalurus_punctatus
ENSTNIG00000016983	pum1	99	76.680	ENSSTOG00000010757	PUM1	100	80.841	Ictidomys_tridecemlineatus
ENSTNIG00000016983	pum1	99	76.680	ENSJJAG00000000530	Pum1	100	80.964	Jaculus_jaculus
ENSTNIG00000016983	pum1	99	96.410	ENSKMAG00000003481	pum1	100	96.410	Kryptolebias_marmoratus
ENSTNIG00000016983	pum1	99	96.838	ENSLBEG00000002527	pum1	100	96.838	Labrus_bergylta
ENSTNIG00000016983	pum1	99	76.155	ENSLACG00000017188	PUM1	100	73.140	Latimeria_chalumnae
ENSTNIG00000016983	pum1	99	81.962	ENSLOCG00000005210	pum1	100	80.798	Lepisosteus_oculatus
ENSTNIG00000016983	pum1	99	76.515	ENSLAFG00000003178	PUM1	100	74.896	Loxodonta_africana
ENSTNIG00000016983	pum1	93	91.346	ENSMFAG00000010291	PUM1	100	91.827	Macaca_fascicularis
ENSTNIG00000016983	pum1	93	90.865	ENSMMUG00000013520	PUM1	100	91.346	Macaca_mulatta
ENSTNIG00000016983	pum1	93	90.865	ENSMNEG00000034639	PUM1	100	91.346	Macaca_nemestrina
ENSTNIG00000016983	pum1	93	90.865	ENSMLEG00000038743	PUM1	100	91.346	Mandrillus_leucophaeus
ENSTNIG00000016983	pum1	99	96.667	ENSMAMG00000011606	pum1	100	96.667	Mastacembelus_armatus
ENSTNIG00000016983	pum1	99	96.325	ENSMZEG00005005834	pum1	100	96.325	Maylandia_zebra
ENSTNIG00000016983	pum1	99	77.427	ENSMGAG00000000724	PUM1	100	76.538	Meleagris_gallopavo
ENSTNIG00000016983	pum1	99	76.495	ENSMAUG00000022090	Pum1	100	80.941	Mesocricetus_auratus
ENSTNIG00000016983	pum1	93	90.625	ENSMICG00000007713	-	100	91.106	Microcebus_murinus
ENSTNIG00000016983	pum1	93	89.928	ENSMICG00000012213	-	100	88.462	Microcebus_murinus
ENSTNIG00000016983	pum1	99	76.515	ENSMOCG00000015463	Pum1	100	80.717	Microtus_ochrogaster
ENSTNIG00000016983	pum1	91	98.558	ENSMMOG00000019817	pum1	100	72.433	Mola_mola
ENSTNIG00000016983	pum1	99	76.388	ENSMODG00000017067	PUM1	100	74.606	Monodelphis_domestica
ENSTNIG00000016983	pum1	99	76.183	MGP_CAROLIEiJ_G0026549	Pum1	100	80.346	Mus_caroli
ENSTNIG00000016983	pum1	99	76.183	ENSMUSG00000028580	Pum1	100	80.222	Mus_musculus
ENSTNIG00000016983	pum1	99	76.100	MGP_PahariEiJ_G0028881	Pum1	100	80.222	Mus_pahari
ENSTNIG00000016983	pum1	99	76.100	MGP_SPRETEiJ_G0027529	Pum1	100	80.346	Mus_spretus
ENSTNIG00000016983	pum1	99	77.095	ENSMPUG00000015454	PUM1	100	74.813	Mustela_putorius_furo
ENSTNIG00000016983	pum1	99	76.534	ENSMLUG00000006490	PUM1	100	74.419	Myotis_lucifugus
ENSTNIG00000016983	pum1	99	76.680	ENSNGAG00000002378	Pum1	100	80.841	Nannospalax_galili
ENSTNIG00000016983	pum1	79	98.127	ENSNBRG00000010689	pum1	100	98.127	Neolamprologus_brichardi
ENSTNIG00000016983	pum1	93	87.740	ENSNLEG00000001151	PUM1	100	88.221	Nomascus_leucogenys
ENSTNIG00000016983	pum1	74	78.141	ENSMEUG00000000976	-	67	80.266	Notamacropus_eugenii
ENSTNIG00000016983	pum1	82	91.589	ENSOPRG00000001776	PUM1	71	91.589	Ochotona_princeps
ENSTNIG00000016983	pum1	99	76.349	ENSODEG00000003465	PUM1	100	80.593	Octodon_degus
ENSTNIG00000016983	pum1	99	96.752	ENSONIG00000002290	pum1	100	96.752	Oreochromis_niloticus
ENSTNIG00000016983	pum1	84	63.397	ENSOANG00000004902	-	100	61.297	Ornithorhynchus_anatinus
ENSTNIG00000016983	pum1	99	76.578	ENSOCUG00000008641	PUM1	99	74.542	Oryctolagus_cuniculus
ENSTNIG00000016983	pum1	99	94.974	ENSORLG00000011482	pum1	100	95.571	Oryzias_latipes
ENSTNIG00000016983	pum1	99	94.974	ENSORLG00020019461	pum1	100	95.571	Oryzias_latipes_hni
ENSTNIG00000016983	pum1	99	94.974	ENSORLG00015011375	pum1	100	95.571	Oryzias_latipes_hsok
ENSTNIG00000016983	pum1	99	73.985	ENSOGAG00000011063	PUM1	100	71.867	Otolemur_garnettii
ENSTNIG00000016983	pum1	93	90.865	ENSOARG00000001899	PUM1	100	91.346	Ovis_aries
ENSTNIG00000016983	pum1	93	90.865	ENSPPAG00000044003	PUM1	100	91.346	Pan_paniscus
ENSTNIG00000016983	pum1	99	76.763	ENSPPRG00000001370	PUM1	100	80.841	Panthera_pardus
ENSTNIG00000016983	pum1	99	76.598	ENSPTIG00000010798	PUM1	100	81.335	Panthera_tigris_altaica
ENSTNIG00000016983	pum1	93	90.865	ENSPTRG00000000453	PUM1	100	91.346	Pan_troglodytes
ENSTNIG00000016983	pum1	93	91.346	ENSPANG00000016338	PUM1	100	91.827	Papio_anubis
ENSTNIG00000016983	pum1	99	79.101	ENSPKIG00000010578	pum1	100	76.936	Paramormyrops_kingsleyae
ENSTNIG00000016983	pum1	99	77.261	ENSPSIG00000014118	PUM1	100	75.229	Pelodiscus_sinensis
ENSTNIG00000016983	pum1	79	95.550	ENSPMGG00000005836	pum1	100	94.969	Periophthalmus_magnuspinnatus
ENSTNIG00000016983	pum1	99	76.495	ENSPEMG00000010009	Pum1	100	80.941	Peromyscus_maniculatus_bairdii
ENSTNIG00000016983	pum1	93	91.587	ENSPCIG00000014151	PUM1	100	91.346	Phascolarctos_cinereus
ENSTNIG00000016983	pum1	95	96.140	ENSPFOG00000007289	pum1	99	97.072	Poecilia_formosa
ENSTNIG00000016983	pum1	99	92.269	ENSPLAG00000007256	pum1	100	96.512	Poecilia_latipinna
ENSTNIG00000016983	pum1	91	96.168	ENSPMEG00000019543	pum1	99	96.168	Poecilia_mexicana
ENSTNIG00000016983	pum1	99	95.983	ENSPREG00000005195	pum1	100	95.983	Poecilia_reticulata
ENSTNIG00000016983	pum1	99	75.346	ENSPPYG00000001621	PUM1	100	73.268	Pongo_abelii
ENSTNIG00000016983	pum1	76	93.231	ENSPCAG00000001979	PUM1	74	93.231	Procavia_capensis
ENSTNIG00000016983	pum1	93	90.625	ENSPCOG00000004398	PUM1	100	91.106	Propithecus_coquereli
ENSTNIG00000016983	pum1	99	74.876	ENSPVAG00000005207	PUM1	97	72.841	Pteropus_vampyrus
ENSTNIG00000016983	pum1	99	96.410	ENSPNYG00000009518	pum1	100	96.410	Pundamilia_nyererei
ENSTNIG00000016983	pum1	99	82.125	ENSPNAG00000026728	pum1	63	92.789	Pygocentrus_nattereri
ENSTNIG00000016983	pum1	99	76.432	ENSRNOG00000011709	Pum1	100	74.480	Rattus_norvegicus
ENSTNIG00000016983	pum1	93	91.346	ENSRBIG00000042521	PUM1	100	91.827	Rhinopithecus_bieti
ENSTNIG00000016983	pum1	93	90.865	ENSRROG00000020156	PUM1	100	91.346	Rhinopithecus_roxellana
ENSTNIG00000016983	pum1	93	90.865	ENSSBOG00000032037	PUM1	100	91.346	Saimiri_boliviensis_boliviensis
ENSTNIG00000016983	pum1	99	76.305	ENSSHAG00000010918	PUM1	100	74.523	Sarcophilus_harrisii
ENSTNIG00000016983	pum1	99	96.325	ENSSMAG00000010918	pum1	100	96.325	Scophthalmus_maximus
ENSTNIG00000016983	pum1	99	97.350	ENSSDUG00000009021	pum1	100	97.350	Seriola_dumerili
ENSTNIG00000016983	pum1	93	98.097	ENSSLDG00000009667	pum1	100	98.097	Seriola_lalandi_dorsalis
ENSTNIG00000016983	pum1	93	79.578	ENSSARG00000003055	PUM1	89	79.070	Sorex_araneus
ENSTNIG00000016983	pum1	99	77.178	ENSSPUG00000006267	PUM1	100	75.062	Sphenodon_punctatus
ENSTNIG00000016983	pum1	99	96.923	ENSSPAG00000016636	pum1	100	96.923	Stegastes_partitus
ENSTNIG00000016983	pum1	99	88.755	ENSSSCG00000003591	PUM1	100	91.827	Sus_scrofa
ENSTNIG00000016983	pum1	99	98.204	ENSTRUG00000013121	pum1	100	99.251	Takifugu_rubripes
ENSTNIG00000016983	pum1	87	90.244	ENSTBEG00000013810	PUM1	89	90.244	Tupaia_belangeri
ENSTNIG00000016983	pum1	92	78.890	ENSTTRG00000007436	PUM1	88	76.572	Tursiops_truncatus
ENSTNIG00000016983	pum1	98	75.023	ENSUAMG00000018262	-	100	72.884	Ursus_americanus
ENSTNIG00000016983	pum1	92	83.354	ENSVPAG00000005902	PUM1	92	81.335	Vicugna_pacos
ENSTNIG00000016983	pum1	99	76.783	ENSVVUG00000014631	PUM1	100	75.833	Vulpes_vulpes
ENSTNIG00000016983	pum1	99	73.663	ENSXETG00000012904	pum1	100	71.970	Xenopus_tropicalis
ENSTNIG00000016983	pum1	99	94.957	ENSXMAG00000002945	pum1	100	96.512	Xiphophorus_maculatus