EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017000 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 489 bases
Position: chr17:11357628-11358116
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020125	zf-C2H2	PF00096.26	1.8e-17	1	2
ENSTNIP00000020125	zf-C2H2	PF00096.26	1.8e-17	2	2
ENSTNIP00000020125	zf-met	PF12874.7	4.4e-13	1	2
ENSTNIP00000020125	zf-met	PF12874.7	4.4e-13	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020356	-	489	-	ENSTNIP00000020125	163 (aa)	-	H3DHY1

Gene Model

Click here to download ENSTNIG00000017000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017000's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017000	-	100	39.474	ENSTNIG00000000934	-	100	39.474
ENSTNIG00000017000	-	100	39.450	ENSTNIG00000001164	ZNF628	98	39.450
ENSTNIG00000017000	-	100	43.529	ENSTNIG00000005856	-	98	43.529
ENSTNIG00000017000	-	100	37.952	ENSTNIG00000019069	-	99	37.952
ENSTNIG00000017000	-	100	40.606	ENSTNIG00000008200	-	100	40.606
ENSTNIG00000017000	-	100	36.196	ENSTNIG00000001159	si:dkey-89b17.4	97	36.196
ENSTNIG00000017000	-	68	50.909	ENSTNIG00000003479	-	98	50.909
ENSTNIG00000017000	-	100	37.725	ENSTNIG00000008100	-	99	37.725
ENSTNIG00000017000	-	100	39.264	ENSTNIG00000008154	-	76	39.264
ENSTNIG00000017000	-	100	48.214	ENSTNIG00000005023	-	100	48.214
ENSTNIG00000017000	-	100	54.545	ENSTNIG00000000277	-	93	54.545
ENSTNIG00000017000	-	100	34.146	ENSTNIG00000000073	znf646	99	34.146
ENSTNIG00000017000	-	100	34.586	ENSTNIG00000008504	snai2	60	34.586
ENSTNIG00000017000	-	100	41.772	ENSTNIG00000000330	-	100	41.772
ENSTNIG00000017000	-	100	41.772	ENSTNIG00000009831	-	96	39.286
ENSTNIG00000017000	-	100	37.952	ENSTNIG00000010722	GZF1	51	37.952
ENSTNIG00000017000	-	100	37.725	ENSTNIG00000005479	-	99	38.125
ENSTNIG00000017000	-	100	43.558	ENSTNIG00000008242	-	99	43.558
ENSTNIG00000017000	-	100	46.939	ENSTNIG00000005051	znf341	56	46.939
ENSTNIG00000017000	-	100	42.331	ENSTNIG00000018984	-	98	42.331
ENSTNIG00000017000	-	100	38.788	ENSTNIG00000011188	-	98	38.788
ENSTNIG00000017000	-	100	40.000	ENSTNIG00000003834	gfi1b	51	40.187
ENSTNIG00000017000	-	100	37.037	ENSTNIG00000000528	-	89	37.037
ENSTNIG00000017000	-	100	51.220	ENSTNIG00000000320	-	100	51.220
ENSTNIG00000017000	-	100	41.818	ENSTNIG00000003979	-	99	41.818
ENSTNIG00000017000	-	100	36.747	ENSTNIG00000003880	znf319b	75	36.747
ENSTNIG00000017000	-	100	44.048	ENSTNIG00000011367	znf710b	50	44.048
ENSTNIG00000017000	-	100	36.025	ENSTNIG00000001921	-	64	36.025
ENSTNIG00000017000	-	100	39.130	ENSTNIG00000002343	-	79	39.130
ENSTNIG00000017000	-	100	41.818	ENSTNIG00000002344	-	99	41.818

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017000	-	99	75.373	ENSAPEG00000003893	-	61	66.667	Amphiprion_percula