EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017138 (Gene tree)
Gene ID: -
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: si:dkey-37o8.1
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 1946 bases
Position: chr6:5682897-5684842
Accession: ZDB-GENE-030131-5667
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020273	GTP_EFTU	PF00009.27	5e-54	1	1
ENSTNIP00000020273	MMR_HSR1	PF01926.23	5.9e-08	1	1
ENSTNIP00000020273	GTP_EFTU_D2	PF03144.25	1.5e-12	1	1
ENSTNIP00000020273	GTP_EFTU_D3	PF03143.17	9.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020504	-	1395	-	ENSTNIP00000020273	464 (aa)	-	H3DIC9

Gene Model

Click here to download ENSTNIG00000017138's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017138's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017138	si:dkey-37o8.1	95	36.199	ENSTNIG00000010212	gspt1l	85	36.199
ENSTNIG00000017138	si:dkey-37o8.1	94	39.091	ENSTNIG00000016320	hbs1l	63	39.091
ENSTNIG00000017138	si:dkey-37o8.1	95	73.138	ENSTNIG00000009821	eef1a1b	96	73.138
ENSTNIG00000017138	si:dkey-37o8.1	80	59.467	ENSTNIG00000014156	EEF1A1	98	59.467
ENSTNIG00000017138	si:dkey-37o8.1	99	69.114	ENSTNIG00000002617	-	97	69.114
ENSTNIG00000017138	si:dkey-37o8.1	95	71.946	ENSTNIG00000002619	-	96	71.946
ENSTNIG00000017138	si:dkey-37o8.1	99	72.052	ENSTNIG00000002618	-	99	72.052
ENSTNIG00000017138	si:dkey-37o8.1	95	36.303	ENSTNIG00000012926	GSPT1	74	36.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017138	si:dkey-37o8.1	98	90.949	ENSAPOG00000016459	si:dkey-37o8.1	99	90.949	Acanthochromis_polyacanthus
ENSTNIG00000017138	si:dkey-37o8.1	94	90.389	ENSACIG00000020985	si:dkey-37o8.1	82	90.389	Amphilophus_citrinellus
ENSTNIG00000017138	si:dkey-37o8.1	98	90.789	ENSAOCG00000002663	si:dkey-37o8.1	99	90.789	Amphiprion_ocellaris
ENSTNIG00000017138	si:dkey-37o8.1	98	91.009	ENSAPEG00000012670	si:dkey-37o8.1	99	91.009	Amphiprion_percula
ENSTNIG00000017138	si:dkey-37o8.1	91	93.128	ENSATEG00000002217	si:dkey-37o8.1	99	93.128	Anabas_testudineus
ENSTNIG00000017138	si:dkey-37o8.1	98	91.209	ENSACLG00000003519	si:dkey-37o8.1	99	91.209	Astatotilapia_calliptera
ENSTNIG00000017138	si:dkey-37o8.1	98	83.151	ENSAMXG00000002728	si:dkey-37o8.1	99	83.151	Astyanax_mexicanus
ENSTNIG00000017138	si:dkey-37o8.1	95	73.469	ENSCPBG00000020570	-	87	73.469	Chrysemys_picta_bellii
ENSTNIG00000017138	si:dkey-37o8.1	98	85.590	ENSCSEG00000019807	si:dkey-37o8.1	99	84.881	Cynoglossus_semilaevis
ENSTNIG00000017138	si:dkey-37o8.1	97	88.196	ENSCVAG00000009828	si:dkey-37o8.1	98	88.196	Cyprinodon_variegatus
ENSTNIG00000017138	si:dkey-37o8.1	95	82.393	ENSDARG00000071727	si:dkey-37o8.1	92	82.393	Danio_rerio
ENSTNIG00000017138	si:dkey-37o8.1	97	82.927	ENSELUG00000007495	si:dkey-37o8.1	98	82.927	Esox_lucius
ENSTNIG00000017138	si:dkey-37o8.1	97	88.839	ENSFHEG00000017452	si:dkey-37o8.1	98	88.839	Fundulus_heteroclitus
ENSTNIG00000017138	si:dkey-37o8.1	95	81.716	ENSGMOG00000006122	si:dkey-37o8.1	98	81.716	Gadus_morhua
ENSTNIG00000017138	si:dkey-37o8.1	97	82.366	ENSGAFG00000000367	si:dkey-37o8.1	99	82.366	Gambusia_affinis
ENSTNIG00000017138	si:dkey-37o8.1	98	88.158	ENSGACG00000004505	si:dkey-37o8.1	99	88.158	Gasterosteus_aculeatus
ENSTNIG00000017138	si:dkey-37o8.1	95	74.376	ENSGAGG00000007724	-	93	76.923	Gopherus_agassizii
ENSTNIG00000017138	si:dkey-37o8.1	98	90.989	ENSHBUG00000015515	si:dkey-37o8.1	99	90.989	Haplochromis_burtoni
ENSTNIG00000017138	si:dkey-37o8.1	96	80.180	ENSHCOG00000001215	si:dkey-37o8.1	98	80.180	Hippocampus_comes
ENSTNIG00000017138	si:dkey-37o8.1	95	83.296	ENSIPUG00000004067	si:dkey-37o8.1	97	83.296	Ictalurus_punctatus
ENSTNIG00000017138	si:dkey-37o8.1	97	89.732	ENSKMAG00000015910	si:dkey-37o8.1	98	89.732	Kryptolebias_marmoratus
ENSTNIG00000017138	si:dkey-37o8.1	97	92.188	ENSLBEG00000021334	si:dkey-37o8.1	89	92.188	Labrus_bergylta
ENSTNIG00000017138	si:dkey-37o8.1	95	76.298	ENSLACG00000003948	si:dkey-37o8.1	96	76.298	Latimeria_chalumnae
ENSTNIG00000017138	si:dkey-37o8.1	97	81.153	ENSLOCG00000011245	si:dkey-37o8.1	98	81.153	Lepisosteus_oculatus
ENSTNIG00000017138	si:dkey-37o8.1	96	76.802	ENSMAMG00000009907	si:dkey-37o8.1	93	76.802	Mastacembelus_armatus
ENSTNIG00000017138	si:dkey-37o8.1	98	91.209	ENSMZEG00005018358	si:dkey-37o8.1	99	91.209	Maylandia_zebra
ENSTNIG00000017138	si:dkey-37o8.1	97	90.889	ENSMMOG00000004111	si:dkey-37o8.1	98	90.889	Mola_mola
ENSTNIG00000017138	si:dkey-37o8.1	94	81.507	ENSMALG00000017152	si:dkey-37o8.1	99	81.507	Monopterus_albus
ENSTNIG00000017138	si:dkey-37o8.1	98	91.209	ENSNBRG00000013552	si:dkey-37o8.1	99	91.209	Neolamprologus_brichardi
ENSTNIG00000017138	si:dkey-37o8.1	98	91.209	ENSONIG00000006165	si:dkey-37o8.1	99	91.209	Oreochromis_niloticus
ENSTNIG00000017138	si:dkey-37o8.1	98	89.451	ENSORLG00000019066	si:dkey-37o8.1	99	89.451	Oryzias_latipes
ENSTNIG00000017138	si:dkey-37o8.1	98	89.451	ENSORLG00020008094	si:dkey-37o8.1	99	89.451	Oryzias_latipes_hni
ENSTNIG00000017138	si:dkey-37o8.1	98	89.231	ENSORLG00015008410	si:dkey-37o8.1	99	89.231	Oryzias_latipes_hsok
ENSTNIG00000017138	si:dkey-37o8.1	97	90.625	ENSOMEG00000001868	si:dkey-37o8.1	98	90.625	Oryzias_melastigma
ENSTNIG00000017138	si:dkey-37o8.1	95	83.747	ENSPKIG00000017246	si:dkey-37o8.1	97	83.747	Paramormyrops_kingsleyae
ENSTNIG00000017138	si:dkey-37o8.1	57	67.658	ENSPSIG00000008080	-	95	67.658	Pelodiscus_sinensis
ENSTNIG00000017138	si:dkey-37o8.1	97	89.286	ENSPFOG00000013173	si:dkey-37o8.1	98	89.286	Poecilia_formosa
ENSTNIG00000017138	si:dkey-37o8.1	97	87.946	ENSPLAG00000010405	si:dkey-37o8.1	98	87.946	Poecilia_latipinna
ENSTNIG00000017138	si:dkey-37o8.1	97	89.732	ENSPMEG00000015233	si:dkey-37o8.1	98	89.732	Poecilia_mexicana
ENSTNIG00000017138	si:dkey-37o8.1	96	89.213	ENSPREG00000006280	si:dkey-37o8.1	98	89.213	Poecilia_reticulata
ENSTNIG00000017138	si:dkey-37o8.1	98	90.549	ENSPNYG00000002059	si:dkey-37o8.1	99	90.549	Pundamilia_nyererei
ENSTNIG00000017138	si:dkey-37o8.1	95	83.973	ENSPNAG00000009990	si:dkey-37o8.1	97	83.973	Pygocentrus_nattereri
ENSTNIG00000017138	si:dkey-37o8.1	96	81.696	ENSSFOG00015019070	si:dkey-37o8.1	98	81.696	Scleropages_formosus
ENSTNIG00000017138	si:dkey-37o8.1	97	93.318	ENSSMAG00000016143	si:dkey-37o8.1	98	93.318	Scophthalmus_maximus
ENSTNIG00000017138	si:dkey-37o8.1	98	91.886	ENSSDUG00000009163	si:dkey-37o8.1	99	91.886	Seriola_dumerili
ENSTNIG00000017138	si:dkey-37o8.1	98	91.667	ENSSLDG00000023761	si:dkey-37o8.1	99	91.667	Seriola_lalandi_dorsalis
ENSTNIG00000017138	si:dkey-37o8.1	98	70.460	ENSSPUG00000007467	-	99	70.460	Sphenodon_punctatus
ENSTNIG00000017138	si:dkey-37o8.1	98	90.789	ENSSPAG00000013856	si:dkey-37o8.1	99	90.789	Stegastes_partitus
ENSTNIG00000017138	si:dkey-37o8.1	97	94.013	ENSTRUG00000009006	si:dkey-37o8.1	99	94.013	Takifugu_rubripes
ENSTNIG00000017138	si:dkey-37o8.1	95	75.626	ENSXETG00000017744	42Sp50	96	75.000	Xenopus_tropicalis
ENSTNIG00000017138	si:dkey-37o8.1	96	89.663	ENSXCOG00000012296	si:dkey-37o8.1	98	89.663	Xiphophorus_couchianus
ENSTNIG00000017138	si:dkey-37o8.1	97	89.732	ENSXMAG00000001998	si:dkey-37o8.1	98	89.732	Xiphophorus_maculatus