EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017149 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1805 bases
Position: chr3:999482-1001286
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020284	RF-1	PF00472.20	1.1e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020515	-	1161	-	ENSTNIP00000020284	387 (aa)	-	H3DIE0

Gene Model

Click here to download ENSTNIG00000017149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017149	-	76	48.805	ENSTNIG00000007451	mtrf1l	88	48.944

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017149	-	98	57.143	ENSG00000120662	MTRF1	83	57.453	Homo_sapiens
ENSTNIG00000017149	-	89	75.504	ENSAPOG00000010181	mtrf1	85	75.504	Acanthochromis_polyacanthus
ENSTNIG00000017149	-	95	58.696	ENSAMEG00000008696	MTRF1	80	59.218	Ailuropoda_melanoleuca
ENSTNIG00000017149	-	59	82.969	ENSACIG00000001495	mtrf1	89	83.258	Amphilophus_citrinellus
ENSTNIG00000017149	-	99	75.584	ENSAOCG00000002832	mtrf1	84	76.075	Amphiprion_ocellaris
ENSTNIG00000017149	-	99	74.805	ENSAPEG00000014844	mtrf1	84	75.269	Amphiprion_percula
ENSTNIG00000017149	-	93	72.727	ENSATEG00000017403	mtrf1	87	72.727	Anabas_testudineus
ENSTNIG00000017149	-	98	55.906	ENSAPLG00000009317	MTRF1	85	56.250	Anas_platyrhynchos
ENSTNIG00000017149	-	99	56.283	ENSACAG00000000897	MTRF1	83	56.522	Anolis_carolinensis
ENSTNIG00000017149	-	98	53.562	ENSANAG00000023063	-	82	53.784	Aotus_nancymaae
ENSTNIG00000017149	-	91	56.818	ENSANAG00000025310	-	89	58.642	Aotus_nancymaae
ENSTNIG00000017149	-	100	77.062	ENSACLG00000023945	mtrf1	86	77.062	Astatotilapia_calliptera
ENSTNIG00000017149	-	60	74.786	ENSAMXG00000031859	mtrf1	89	76.744	Astyanax_mexicanus
ENSTNIG00000017149	-	98	58.201	ENSBTAG00000012260	MTRF1	84	59.322	Bos_taurus
ENSTNIG00000017149	-	98	57.143	ENSCJAG00000017739	MTRF1	89	67.742	Callithrix_jacchus
ENSTNIG00000017149	-	97	58.556	ENSCAFG00000004795	MTRF1	82	59.066	Canis_familiaris
ENSTNIG00000017149	-	97	58.556	ENSCAFG00020018178	MTRF1	82	59.066	Canis_lupus_dingo
ENSTNIG00000017149	-	98	58.201	ENSCHIG00000011810	MTRF1	82	58.696	Capra_hircus
ENSTNIG00000017149	-	98	58.995	ENSTSYG00000006976	MTRF1	83	59.350	Carlito_syrichta
ENSTNIG00000017149	-	98	58.047	ENSCAPG00000013163	MTRF1	85	58.378	Cavia_aperea
ENSTNIG00000017149	-	98	57.784	ENSCPOG00000005264	MTRF1	83	58.108	Cavia_porcellus
ENSTNIG00000017149	-	98	58.201	ENSCCAG00000035116	MTRF1	83	58.537	Cebus_capucinus
ENSTNIG00000017149	-	98	57.937	ENSCATG00000009909	MTRF1	83	58.266	Cercocebus_atys
ENSTNIG00000017149	-	98	57.672	ENSCLAG00000000582	MTRF1	83	57.995	Chinchilla_lanigera
ENSTNIG00000017149	-	98	57.672	ENSCSAG00000017835	MTRF1	83	57.995	Chlorocebus_sabaeus
ENSTNIG00000017149	-	91	54.701	ENSCHOG00000011915	-	86	54.701	Choloepus_hoffmanni
ENSTNIG00000017149	-	98	55.643	ENSCPBG00000007969	MTRF1	82	55.707	Chrysemys_picta_bellii
ENSTNIG00000017149	-	98	57.143	ENSCANG00000040353	MTRF1	83	57.453	Colobus_angolensis_palliatus
ENSTNIG00000017149	-	99	56.658	ENSCGRG00001003065	Mtrf1	83	57.453	Cricetulus_griseus_chok1gshd
ENSTNIG00000017149	-	99	56.658	ENSCGRG00000002570	Mtrf1	83	57.453	Cricetulus_griseus_crigri
ENSTNIG00000017149	-	98	72.251	ENSCSEG00000005667	mtrf1	83	72.432	Cynoglossus_semilaevis
ENSTNIG00000017149	-	99	71.018	ENSCVAG00000021729	mtrf1	85	71.274	Cyprinodon_variegatus
ENSTNIG00000017149	-	61	62.553	ENSDARG00000033579	mtrf1	91	66.047	Danio_rerio
ENSTNIG00000017149	-	98	56.842	ENSDNOG00000034196	MTRF1	94	63.356	Dasypus_novemcinctus
ENSTNIG00000017149	-	98	57.256	ENSDORG00000016429	Mtrf1	83	57.568	Dipodomys_ordii
ENSTNIG00000017149	-	98	57.407	ENSETEG00000014811	MTRF1	83	57.724	Echinops_telfairi
ENSTNIG00000017149	-	61	56.596	ENSEBUG00000000778	mtrf1	89	58.986	Eptatretus_burgeri
ENSTNIG00000017149	-	98	58.466	ENSEASG00005015715	MTRF1	83	58.808	Equus_asinus_asinus
ENSTNIG00000017149	-	98	58.201	ENSECAG00000014389	MTRF1	80	59.544	Equus_caballus
ENSTNIG00000017149	-	100	45.128	ENSEEUG00000004450	-	83	45.553	Erinaceus_europaeus
ENSTNIG00000017149	-	99	68.063	ENSELUG00000006544	mtrf1	85	68.293	Esox_lucius
ENSTNIG00000017149	-	98	58.201	ENSFCAG00000031635	MTRF1	82	58.696	Felis_catus
ENSTNIG00000017149	-	98	58.005	ENSFALG00000008036	MTRF1	91	58.424	Ficedula_albicollis
ENSTNIG00000017149	-	98	58.575	ENSFDAG00000017881	MTRF1	83	58.919	Fukomys_damarensis
ENSTNIG00000017149	-	99	70.757	ENSFHEG00000019043	mtrf1	85	71.622	Fundulus_heteroclitus
ENSTNIG00000017149	-	97	65.079	ENSGMOG00000008608	mtrf1	96	65.123	Gadus_morhua
ENSTNIG00000017149	-	98	56.693	ENSGALG00000016951	MTRF1	81	57.065	Gallus_gallus
ENSTNIG00000017149	-	99	73.177	ENSGAFG00000007093	mtrf1	84	73.243	Gambusia_affinis
ENSTNIG00000017149	-	97	76.393	ENSGACG00000013728	mtrf1	96	76.294	Gasterosteus_aculeatus
ENSTNIG00000017149	-	81	57.143	ENSGAGG00000025696	MTRF1	99	57.778	Gopherus_agassizii
ENSTNIG00000017149	-	98	56.878	ENSGGOG00000002529	MTRF1	83	57.182	Gorilla_gorilla
ENSTNIG00000017149	-	98	56.349	ENSHGLG00000003210	MTRF1	83	56.640	Heterocephalus_glaber_female
ENSTNIG00000017149	-	98	56.349	ENSHGLG00100011843	MTRF1	83	56.640	Heterocephalus_glaber_male
ENSTNIG00000017149	-	99	68.930	ENSHCOG00000009449	mtrf1	84	68.649	Hippocampus_comes
ENSTNIG00000017149	-	98	57.672	ENSSTOG00000021682	MTRF1	83	57.995	Ictidomys_tridecemlineatus
ENSTNIG00000017149	-	97	58.621	ENSJJAG00000017590	Mtrf1	82	58.856	Jaculus_jaculus
ENSTNIG00000017149	-	99	74.093	ENSKMAG00000003231	mtrf1	82	74.663	Kryptolebias_marmoratus
ENSTNIG00000017149	-	61	82.128	ENSLBEG00000027169	-	89	83.258	Labrus_bergylta
ENSTNIG00000017149	-	61	82.128	ENSLBEG00000023151	mtrf1	89	83.258	Labrus_bergylta
ENSTNIG00000017149	-	99	57.963	ENSLACG00000010582	MTRF1	82	57.995	Latimeria_chalumnae
ENSTNIG00000017149	-	100	62.791	ENSLOCG00000005937	MTRF1	87	62.791	Lepisosteus_oculatus
ENSTNIG00000017149	-	98	58.201	ENSLAFG00000022177	-	83	58.537	Loxodonta_africana
ENSTNIG00000017149	-	98	43.651	ENSLAFG00000030499	-	81	43.902	Loxodonta_africana
ENSTNIG00000017149	-	98	57.937	ENSMFAG00000037972	MTRF1	83	58.266	Macaca_fascicularis
ENSTNIG00000017149	-	98	57.937	ENSMNEG00000035487	MTRF1	83	58.266	Macaca_nemestrina
ENSTNIG00000017149	-	98	57.937	ENSMLEG00000033582	MTRF1	83	58.266	Mandrillus_leucophaeus
ENSTNIG00000017149	-	99	74.805	ENSMAMG00000022048	mtrf1	83	74.933	Mastacembelus_armatus
ENSTNIG00000017149	-	100	77.062	ENSMZEG00005017922	mtrf1	86	77.062	Maylandia_zebra
ENSTNIG00000017149	-	98	56.430	ENSMGAG00000014971	MTRF1	88	56.522	Meleagris_gallopavo
ENSTNIG00000017149	-	99	57.702	ENSMAUG00000011661	Mtrf1	83	58.537	Mesocricetus_auratus
ENSTNIG00000017149	-	98	57.672	ENSMICG00000033131	MTRF1	83	58.757	Microcebus_murinus
ENSTNIG00000017149	-	99	56.919	ENSMOCG00000011945	Mtrf1	83	57.724	Microtus_ochrogaster
ENSTNIG00000017149	-	61	74.043	ENSMMOG00000013394	mtrf1	90	75.113	Mola_mola
ENSTNIG00000017149	-	99	55.759	ENSMODG00000014772	MTRF1	83	56.522	Monodelphis_domestica
ENSTNIG00000017149	-	99	75.711	ENSMALG00000013274	mtrf1	88	75.711	Monopterus_albus
ENSTNIG00000017149	-	96	57.838	MGP_CAROLIEiJ_G0019539	Mtrf1	79	58.708	Mus_caroli
ENSTNIG00000017149	-	96	58.177	ENSMUSG00000022022	Mtrf1	80	59.053	Mus_musculus
ENSTNIG00000017149	-	98	56.728	MGP_PahariEiJ_G0030557	Mtrf1	82	57.534	Mus_pahari
ENSTNIG00000017149	-	97	57.181	MGP_SPRETEiJ_G0020435	Mtrf1	83	57.453	Mus_spretus
ENSTNIG00000017149	-	97	58.621	ENSMPUG00000001874	MTRF1	80	60.335	Mustela_putorius_furo
ENSTNIG00000017149	-	98	56.614	ENSMLUG00000017237	MTRF1	83	56.911	Myotis_lucifugus
ENSTNIG00000017149	-	98	57.937	ENSNGAG00000014460	Mtrf1	83	58.266	Nannospalax_galili
ENSTNIG00000017149	-	61	82.979	ENSNBRG00000004634	mtrf1	99	82.979	Neolamprologus_brichardi
ENSTNIG00000017149	-	98	57.143	ENSNLEG00000001236	MTRF1	83	57.453	Nomascus_leucogenys
ENSTNIG00000017149	-	98	54.497	ENSMEUG00000001846	MTRF1	83	54.620	Notamacropus_eugenii
ENSTNIG00000017149	-	70	34.926	ENSOPRG00000006450	-	82	34.926	Ochotona_princeps
ENSTNIG00000017149	-	98	57.143	ENSODEG00000005782	MTRF1	83	57.453	Octodon_degus
ENSTNIG00000017149	-	100	76.804	ENSONIG00000012476	mtrf1	100	76.804	Oreochromis_niloticus
ENSTNIG00000017149	-	79	56.958	ENSOANG00000003383	-	93	57.966	Ornithorhynchus_anatinus
ENSTNIG00000017149	-	98	57.672	ENSOCUG00000025207	MTRF1	83	57.995	Oryctolagus_cuniculus
ENSTNIG00000017149	-	99	71.018	ENSORLG00000003225	mtrf1	84	71.429	Oryzias_latipes
ENSTNIG00000017149	-	99	71.540	ENSORLG00020021048	mtrf1	84	71.968	Oryzias_latipes_hni
ENSTNIG00000017149	-	99	70.496	ENSORLG00015020957	mtrf1	84	71.159	Oryzias_latipes_hsok
ENSTNIG00000017149	-	99	72.868	ENSOMEG00000002022	mtrf1	85	73.514	Oryzias_melastigma
ENSTNIG00000017149	-	83	50.779	ENSOGAG00000026411	-	95	50.962	Otolemur_garnettii
ENSTNIG00000017149	-	98	56.545	ENSOGAG00000009719	-	79	59.322	Otolemur_garnettii
ENSTNIG00000017149	-	98	58.201	ENSOARG00000006994	MTRF1	82	58.696	Ovis_aries
ENSTNIG00000017149	-	98	57.143	ENSPPAG00000000050	MTRF1	83	57.453	Pan_paniscus
ENSTNIG00000017149	-	98	58.730	ENSPPRG00000009511	MTRF1	82	59.239	Panthera_pardus
ENSTNIG00000017149	-	97	58.355	ENSPTIG00000006673	MTRF1	82	58.856	Panthera_tigris_altaica
ENSTNIG00000017149	-	98	57.143	ENSPTRG00000005815	MTRF1	83	57.453	Pan_troglodytes
ENSTNIG00000017149	-	98	57.937	ENSPANG00000010809	MTRF1	83	58.266	Papio_anubis
ENSTNIG00000017149	-	97	61.804	ENSPKIG00000015711	mtrf1	85	62.259	Paramormyrops_kingsleyae
ENSTNIG00000017149	-	98	55.118	ENSPSIG00000004773	MTRF1	82	54.891	Pelodiscus_sinensis
ENSTNIG00000017149	-	60	81.197	ENSPMGG00000006724	mtrf1	90	81.448	Periophthalmus_magnuspinnatus
ENSTNIG00000017149	-	98	57.784	ENSPEMG00000020982	Mtrf1	81	58.630	Peromyscus_maniculatus_bairdii
ENSTNIG00000017149	-	87	52.754	ENSPMAG00000009849	mtrf1	99	53.043	Petromyzon_marinus
ENSTNIG00000017149	-	99	57.592	ENSPCIG00000012940	MTRF1	83	58.152	Phascolarctos_cinereus
ENSTNIG00000017149	-	98	71.129	ENSPFOG00000000254	mtrf1	84	71.081	Poecilia_formosa
ENSTNIG00000017149	-	98	71.391	ENSPLAG00000014280	mtrf1	84	71.351	Poecilia_latipinna
ENSTNIG00000017149	-	98	70.866	ENSPMEG00000023245	mtrf1	84	70.811	Poecilia_mexicana
ENSTNIG00000017149	-	60	73.820	ENSPREG00000018619	mtrf1	91	73.874	Poecilia_reticulata
ENSTNIG00000017149	-	98	56.085	ENSPPYG00000005313	MTRF1	83	56.369	Pongo_abelii
ENSTNIG00000017149	-	98	57.407	ENSPCOG00000018133	MTRF1	83	57.724	Propithecus_coquereli
ENSTNIG00000017149	-	100	55.556	ENSPVAG00000008573	MTRF1	83	56.911	Pteropus_vampyrus
ENSTNIG00000017149	-	61	83.613	ENSPNYG00000004357	mtrf1	96	83.613	Pundamilia_nyererei
ENSTNIG00000017149	-	97	65.691	ENSPNAG00000010682	mtrf1	83	65.746	Pygocentrus_nattereri
ENSTNIG00000017149	-	96	57.641	ENSRNOG00000047106	Mtrf1	93	69.027	Rattus_norvegicus
ENSTNIG00000017149	-	98	56.878	ENSRBIG00000007069	MTRF1	83	57.182	Rhinopithecus_bieti
ENSTNIG00000017149	-	98	56.878	ENSRROG00000035345	MTRF1	83	57.182	Rhinopithecus_roxellana
ENSTNIG00000017149	-	95	58.696	ENSSBOG00000004572	MTRF1	95	59.053	Saimiri_boliviensis_boliviensis
ENSTNIG00000017149	-	91	57.224	ENSSHAG00000018109	MTRF1	86	57.790	Sarcophilus_harrisii
ENSTNIG00000017149	-	99	62.953	ENSSFOG00015006191	mtrf1	84	63.172	Scleropages_formosus
ENSTNIG00000017149	-	99	74.479	ENSSMAG00000015740	mtrf1	83	75.068	Scophthalmus_maximus
ENSTNIG00000017149	-	99	76.684	ENSSDUG00000022608	mtrf1	76	76.684	Seriola_dumerili
ENSTNIG00000017149	-	99	76.425	ENSSLDG00000013584	mtrf1	76	76.425	Seriola_lalandi_dorsalis
ENSTNIG00000017149	-	98	56.085	ENSSARG00000002306	MTRF1	83	56.369	Sorex_araneus
ENSTNIG00000017149	-	61	64.979	ENSSPUG00000007354	MTRF1	98	64.979	Sphenodon_punctatus
ENSTNIG00000017149	-	99	74.674	ENSSPAG00000000881	mtrf1	84	75.405	Stegastes_partitus
ENSTNIG00000017149	-	98	58.201	ENSSSCG00000009436	MTRF1	83	58.537	Sus_scrofa
ENSTNIG00000017149	-	98	57.218	ENSTGUG00000012422	MTRF1	89	58.152	Taeniopygia_guttata
ENSTNIG00000017149	-	100	81.959	ENSTRUG00000000396	mtrf1	86	81.959	Takifugu_rubripes
ENSTNIG00000017149	-	62	56.067	ENSTBEG00000004696	-	100	56.067	Tupaia_belangeri
ENSTNIG00000017149	-	98	57.672	ENSTTRG00000010370	MTRF1	83	58.266	Tursiops_truncatus
ENSTNIG00000017149	-	95	58.967	ENSUMAG00000014772	MTRF1	80	59.497	Ursus_maritimus
ENSTNIG00000017149	-	98	57.256	ENSVPAG00000002565	MTRF1	82	57.568	Vicugna_pacos
ENSTNIG00000017149	-	97	58.289	ENSVVUG00000028755	MTRF1	81	58.791	Vulpes_vulpes
ENSTNIG00000017149	-	99	55.469	ENSXETG00000018904	mtrf1	94	56.044	Xenopus_tropicalis
ENSTNIG00000017149	-	61	74.468	ENSXCOG00000020386	mtrf1	91	75.113	Xiphophorus_couchianus
ENSTNIG00000017149	-	99	71.615	ENSXMAG00000009853	mtrf1	84	71.892	Xiphophorus_maculatus