EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000017277 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 19489 bases
Position: chr10:7292557-7312045
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020415	ResIII	PF04851.15	2.2e-18	1	1
ENSTNIP00000020415	DEAD	PF00270.29	2.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020647	-	5754	-	ENSTNIP00000020415	1918 (aa)	-	H3DIS1

Gene Model

Click here to download ENSTNIG00000017277's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017277's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017277	-	100	39.401	ENSG00000187790	FANCM	98	63.459	Homo_sapiens
ENSTNIG00000017277	-	100	40.229	ENSAMEG00000002114	FANCM	90	50.716	Ailuropoda_melanoleuca
ENSTNIG00000017277	-	100	57.123	ENSATEG00000012412	-	99	57.352	Anabas_testudineus
ENSTNIG00000017277	-	87	50.729	ENSANAG00000025075	FANCM	84	50.729	Aotus_nancymaae
ENSTNIG00000017277	-	100	56.370	ENSACLG00000016008	-	99	56.631	Astatotilapia_calliptera
ENSTNIG00000017277	-	88	45.510	ENSAMXG00000020275	-	97	44.966	Astyanax_mexicanus
ENSTNIG00000017277	-	100	39.368	ENSBTAG00000002612	FANCM	95	60.504	Bos_taurus
ENSTNIG00000017277	-	92	49.438	ENSCAFG00000014062	FANCM	84	49.625	Canis_familiaris
ENSTNIG00000017277	-	76	58.787	ENSCHIG00000015176	FANCM	73	58.787	Capra_hircus
ENSTNIG00000017277	-	100	39.490	ENSCPOG00000001446	FANCM	61	50.296	Cavia_porcellus
ENSTNIG00000017277	-	92	51.542	ENSCCAG00000026593	FANCM	82	51.389	Cebus_capucinus
ENSTNIG00000017277	-	100	39.384	ENSCATG00000031379	FANCM	99	39.128	Cercocebus_atys
ENSTNIG00000017277	-	100	39.319	ENSCSAG00000015308	FANCM	93	43.891	Chlorocebus_sabaeus
ENSTNIG00000017277	-	69	58.594	ENSCPBG00000015089	FANCM	82	55.806	Chrysemys_picta_bellii
ENSTNIG00000017277	-	100	39.449	ENSCANG00000029498	FANCM	99	39.023	Colobus_angolensis_palliatus
ENSTNIG00000017277	-	84	56.958	ENSCGRG00001023573	Fancm	81	56.958	Cricetulus_griseus_chok1gshd
ENSTNIG00000017277	-	100	53.515	ENSCSEG00000002313	-	99	53.546	Cynoglossus_semilaevis
ENSTNIG00000017277	-	91	58.813	ENSCVAG00000015579	-	98	57.514	Cyprinodon_variegatus
ENSTNIG00000017277	-	80	59.050	ENSDNOG00000007697	FANCM	74	56.789	Dasypus_novemcinctus
ENSTNIG00000017277	-	82	59.539	ENSDORG00000010095	Fancm	82	59.539	Dipodomys_ordii
ENSTNIG00000017277	-	65	56.286	ENSETEG00000003360	FANCM	63	56.571	Echinops_telfairi
ENSTNIG00000017277	-	71	57.816	ENSEASG00005007781	FANCM	99	62.256	Equus_asinus_asinus
ENSTNIG00000017277	-	76	57.993	ENSECAG00000018694	FANCM	71	50.934	Equus_caballus
ENSTNIG00000017277	-	65	49.032	ENSEEUG00000005607	-	63	51.163	Erinaceus_europaeus
ENSTNIG00000017277	-	81	67.431	ENSELUG00000015761	-	90	67.431	Esox_lucius
ENSTNIG00000017277	-	86	50.291	ENSFDAG00000009043	FANCM	85	50.097	Fukomys_damarensis
ENSTNIG00000017277	-	89	69.693	ENSGMOG00000002019	-	95	67.442	Gadus_morhua
ENSTNIG00000017277	-	82	57.328	ENSGALG00000031182	FANCM	78	56.941	Gallus_gallus
ENSTNIG00000017277	-	99	56.417	ENSGACG00000009448	-	100	56.122	Gasterosteus_aculeatus
ENSTNIG00000017277	-	100	39.621	ENSGGOG00000008546	FANCM	99	39.375	Gorilla_gorilla
ENSTNIG00000017277	-	100	55.946	ENSHBUG00000007085	-	99	56.114	Haplochromis_burtoni
ENSTNIG00000017277	-	87	50.336	ENSHGLG00000013787	FANCM	85	50.432	Heterocephalus_glaber_female
ENSTNIG00000017277	-	87	50.336	ENSHGLG00100006377	FANCM	85	50.432	Heterocephalus_glaber_male
ENSTNIG00000017277	-	100	47.206	ENSIPUG00000014629	fancm	88	60.112	Ictalurus_punctatus
ENSTNIG00000017277	-	89	58.990	ENSLBEG00000004982	-	97	58.586	Labrus_bergylta
ENSTNIG00000017277	-	93	59.799	ENSLACG00000007739	FANCM	84	59.799	Latimeria_chalumnae
ENSTNIG00000017277	-	93	51.168	ENSLOCG00000011318	FANCM	99	46.019	Lepisosteus_oculatus
ENSTNIG00000017277	-	82	58.568	ENSLAFG00000001136	FANCM	82	50.543	Loxodonta_africana
ENSTNIG00000017277	-	100	39.782	ENSMFAG00000000383	FANCM	93	43.439	Macaca_fascicularis
ENSTNIG00000017277	-	100	39.555	ENSMMUG00000016513	FANCM	93	43.439	Macaca_mulatta
ENSTNIG00000017277	-	100	39.431	ENSMNEG00000038659	FANCM	93	43.439	Macaca_nemestrina
ENSTNIG00000017277	-	97	54.651	ENSMLEG00000035743	FANCM	99	54.651	Mandrillus_leucophaeus
ENSTNIG00000017277	-	100	56.167	ENSMAMG00000007087	-	99	56.004	Mastacembelus_armatus
ENSTNIG00000017277	-	100	56.370	ENSMZEG00005004644	-	99	56.678	Maylandia_zebra
ENSTNIG00000017277	-	81	56.345	ENSMAUG00000015450	Fancm	77	56.345	Mesocricetus_auratus
ENSTNIG00000017277	-	94	44.298	ENSMICG00000005811	FANCM	91	52.809	Microcebus_murinus
ENSTNIG00000017277	-	61	52.174	ENSMOCG00000008775	Fancm	89	52.174	Microtus_ochrogaster
ENSTNIG00000017277	-	90	60.806	ENSMMOG00000010215	-	95	62.016	Mola_mola
ENSTNIG00000017277	-	89	48.771	ENSMODG00000007334	FANCM	87	48.771	Monodelphis_domestica
ENSTNIG00000017277	-	81	58.981	MGP_CAROLIEiJ_G0017791	Fancm	79	57.966	Mus_caroli
ENSTNIG00000017277	-	87	58.854	ENSMUSG00000055884	Fancm	95	63.240	Mus_musculus
ENSTNIG00000017277	-	81	55.233	MGP_PahariEiJ_G0029547	Fancm	77	55.485	Mus_pahari
ENSTNIG00000017277	-	100	39.458	MGP_SPRETEiJ_G0018636	Fancm	88	50.448	Mus_spretus
ENSTNIG00000017277	-	100	39.665	ENSMPUG00000004849	FANCM	82	50.735	Mustela_putorius_furo
ENSTNIG00000017277	-	94	42.489	ENSMLUG00000006671	FANCM	82	50.492	Myotis_lucifugus
ENSTNIG00000017277	-	81	57.344	ENSNGAG00000017199	Fancm	78	57.216	Nannospalax_galili
ENSTNIG00000017277	-	100	39.686	ENSNLEG00000004432	FANCM	99	39.487	Nomascus_leucogenys
ENSTNIG00000017277	-	54	52.579	ENSMEUG00000004977	-	51	52.080	Notamacropus_eugenii
ENSTNIG00000017277	-	92	78.662	ENSONIG00000003531	-	90	79.241	Oreochromis_niloticus
ENSTNIG00000017277	-	89	60.085	ENSOANG00000013997	FANCM	79	60.085	Ornithorhynchus_anatinus
ENSTNIG00000017277	-	100	40.193	ENSOCUG00000007539	FANCM	90	51.072	Oryctolagus_cuniculus
ENSTNIG00000017277	-	100	56.134	ENSORLG00000014503	-	99	56.399	Oryzias_latipes
ENSTNIG00000017277	-	100	56.459	ENSORLG00020013516	-	99	56.603	Oryzias_latipes_hni
ENSTNIG00000017277	-	100	56.208	ENSORLG00015012100	-	99	56.568	Oryzias_latipes_hsok
ENSTNIG00000017277	-	100	56.173	ENSOMEG00000010717	-	99	56.876	Oryzias_melastigma
ENSTNIG00000017277	-	90	52.187	ENSOGAG00000003015	FANCM	88	52.286	Otolemur_garnettii
ENSTNIG00000017277	-	85	56.250	ENSOARG00000009429	FANCM	82	56.250	Ovis_aries
ENSTNIG00000017277	-	100	39.574	ENSPPAG00000028944	FANCM	99	39.330	Pan_paniscus
ENSTNIG00000017277	-	100	39.291	ENSPTRG00000006307	FANCM	99	39.141	Pan_troglodytes
ENSTNIG00000017277	-	100	39.038	ENSPANG00000023200	FANCM	93	43.439	Papio_anubis
ENSTNIG00000017277	-	83	56.469	ENSPEMG00000005619	Fancm	80	55.307	Peromyscus_maniculatus_bairdii
ENSTNIG00000017277	-	89	74.737	ENSPFOG00000002008	-	84	79.109	Poecilia_formosa
ENSTNIG00000017277	-	100	53.906	ENSPLAG00000014164	-	99	54.763	Poecilia_latipinna
ENSTNIG00000017277	-	100	54.116	ENSPMEG00000010746	-	99	54.616	Poecilia_mexicana
ENSTNIG00000017277	-	100	54.012	ENSPREG00000019849	-	99	54.856	Poecilia_reticulata
ENSTNIG00000017277	-	93	45.023	ENSPPYG00000005781	FANCM	96	45.131	Pongo_abelii
ENSTNIG00000017277	-	68	52.187	ENSPCAG00000011363	-	63	52.616	Procavia_capensis
ENSTNIG00000017277	-	84	60.465	ENSPCOG00000014388	FANCM	82	60.465	Propithecus_coquereli
ENSTNIG00000017277	-	68	62.661	ENSPVAG00000015802	FANCM	64	61.803	Pteropus_vampyrus
ENSTNIG00000017277	-	99	44.136	ENSPNAG00000013558	-	99	44.074	Pygocentrus_nattereri
ENSTNIG00000017277	-	91	55.489	ENSRNOG00000056721	Fancm	97	49.801	Rattus_norvegicus
ENSTNIG00000017277	-	100	38.713	ENSRBIG00000011451	FANCM	93	42.986	Rhinopithecus_bieti
ENSTNIG00000017277	-	100	38.792	ENSRROG00000028917	FANCM	93	42.986	Rhinopithecus_roxellana
ENSTNIG00000017277	-	94	42.489	ENSSBOG00000030882	FANCM	83	50.682	Saimiri_boliviensis_boliviensis
ENSTNIG00000017277	-	67	58.344	ENSSHAG00000000507	FANCM	72	56.818	Sarcophilus_harrisii
ENSTNIG00000017277	-	100	55.764	ENSSMAG00000019903	-	100	68.193	Scophthalmus_maximus
ENSTNIG00000017277	-	69	57.336	ENSSDUG00000016682	-	96	82.923	Seriola_dumerili
ENSTNIG00000017277	-	98	63.395	ENSSLDG00000003408	-	99	58.872	Seriola_lalandi_dorsalis
ENSTNIG00000017277	-	55	62.417	ENSSARG00000002618	FANCM	51	62.521	Sorex_araneus
ENSTNIG00000017277	-	81	57.953	ENSSSCG00000005000	FANCM	82	51.034	Sus_scrofa
ENSTNIG00000017277	-	84	50.444	ENSTTRG00000006669	FANCM	82	50.297	Tursiops_truncatus
ENSTNIG00000017277	-	68	63.352	ENSVPAG00000005763	FANCM	53	63.352	Vicugna_pacos
ENSTNIG00000017277	-	91	50.337	ENSVVUG00000000357	FANCM	83	50.818	Vulpes_vulpes
ENSTNIG00000017277	-	100	54.368	ENSXMAG00000007702	-	99	54.873	Xiphophorus_maculatus