EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000017285 (Gene tree)
Gene ID: -
Gene Symbol: rpl13a
Alias: fd05d08|hm:zehp0384|wu:fa95e06|wu:fb08g07|wu:fd05d08
Full Name: ribosomal protein L13a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 969 bases
Position: chr10:7129817-7130785
Accession: ZDB-GENE-030131-168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020423	Ribosomal_L13	PF00572.18	9.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020655	-	299	-	ENSTNIP00000020423	99 (aa)	-	Q4RMB7

Gene Model

Click here to download ENSTNIG00000017285's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017285's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017285	rpl13a	100	93.939	ENSG00000142541	RPL13A	63	94.382	Homo_sapiens
ENSTNIG00000017285	rpl13a	100	95.960	ENSACIG00000004871	rpl13a	50	95.960	Amphilophus_citrinellus
ENSTNIG00000017285	rpl13a	90	94.382	ENSANAG00000013769	-	63	94.382	Aotus_nancymaae
ENSTNIG00000017285	rpl13a	100	74.747	ENSANAG00000021423	-	52	68.235	Aotus_nancymaae
ENSTNIG00000017285	rpl13a	90	78.947	ENSANAG00000037443	-	67	78.947	Aotus_nancymaae
ENSTNIG00000017285	rpl13a	96	85.263	ENSCJAG00000008837	-	54	85.263	Callithrix_jacchus
ENSTNIG00000017285	rpl13a	100	94.949	ENSCHIG00000021732	-	50	94.949	Capra_hircus
ENSTNIG00000017285	rpl13a	100	94.949	ENSCAPG00000007267	RPL13A	56	94.949	Cavia_aperea
ENSTNIG00000017285	rpl13a	100	94.949	ENSCPOG00000012417	RPL13A	56	94.949	Cavia_porcellus
ENSTNIG00000017285	rpl13a	100	86.869	ENSCCAG00000034479	-	54	85.227	Cebus_capucinus
ENSTNIG00000017285	rpl13a	89	92.045	ENSCCAG00000029220	-	61	92.045	Cebus_capucinus
ENSTNIG00000017285	rpl13a	89	81.818	ENSCCAG00000020555	-	63	81.818	Cebus_capucinus
ENSTNIG00000017285	rpl13a	100	93.939	ENSCLAG00000012323	RPL13A	56	93.939	Chinchilla_lanigera
ENSTNIG00000017285	rpl13a	100	75.248	ENSCANG00000018732	-	61	75.248	Colobus_angolensis_palliatus
ENSTNIG00000017285	rpl13a	100	94.949	ENSCGRG00000005890	-	56	94.949	Cricetulus_griseus_crigri
ENSTNIG00000017285	rpl13a	100	95.960	ENSCVAG00000011043	rpl13a	54	95.960	Cyprinodon_variegatus
ENSTNIG00000017285	rpl13a	100	93.939	ENSDORG00000012194	-	50	93.939	Dipodomys_ordii
ENSTNIG00000017285	rpl13a	100	80.808	ENSEBUG00000007234	rpl13a	53	80.808	Eptatretus_burgeri
ENSTNIG00000017285	rpl13a	100	93.939	ENSECAG00000015832	RPL13A	50	93.939	Equus_caballus
ENSTNIG00000017285	rpl13a	100	94.949	ENSFDAG00000016892	RPL13A	56	94.949	Fukomys_damarensis
ENSTNIG00000017285	rpl13a	100	94.949	ENSGACG00000009310	rpl13a	63	95.506	Gasterosteus_aculeatus
ENSTNIG00000017285	rpl13a	89	86.364	ENSGGOG00000039250	-	53	86.364	Gorilla_gorilla
ENSTNIG00000017285	rpl13a	100	94.949	ENSHGLG00000010070	RPL13A	56	94.949	Heterocephalus_glaber_female
ENSTNIG00000017285	rpl13a	100	94.949	ENSHGLG00100010359	RPL13A	56	94.949	Heterocephalus_glaber_male
ENSTNIG00000017285	rpl13a	100	96.970	ENSHCOG00000007902	rpl13a	50	96.970	Hippocampus_comes
ENSTNIG00000017285	rpl13a	100	94.949	ENSSTOG00000021558	RPL13A	56	94.949	Ictidomys_tridecemlineatus
ENSTNIG00000017285	rpl13a	100	95.960	ENSJJAG00000000343	-	56	95.960	Jaculus_jaculus
ENSTNIG00000017285	rpl13a	100	96.970	ENSLBEG00000005434	rpl13a	63	63.492	Labrus_bergylta
ENSTNIG00000017285	rpl13a	100	95.960	ENSLACG00000019092	RPL13A	55	95.960	Latimeria_chalumnae
ENSTNIG00000017285	rpl13a	100	93.939	ENSMFAG00000001097	-	63	94.382	Macaca_fascicularis
ENSTNIG00000017285	rpl13a	68	95.522	ENSMLEG00000038132	-	57	95.522	Mandrillus_leucophaeus
ENSTNIG00000017285	rpl13a	100	93.939	ENSMAUG00000016402	-	56	93.939	Mesocricetus_auratus
ENSTNIG00000017285	rpl13a	94	79.570	ENSMICG00000043457	-	52	79.570	Microcebus_murinus
ENSTNIG00000017285	rpl13a	100	94.949	ENSMOCG00000002774	-	56	94.949	Microtus_ochrogaster
ENSTNIG00000017285	rpl13a	100	76.768	ENSMOCG00000016427	-	52	76.768	Microtus_ochrogaster
ENSTNIG00000017285	rpl13a	100	94.949	ENSMUSG00000074129	Rpl13a	56	94.949	Mus_musculus
ENSTNIG00000017285	rpl13a	100	95.960	ENSNGAG00000021984	-	56	95.960	Nannospalax_galili
ENSTNIG00000017285	rpl13a	100	89.899	ENSNLEG00000012957	-	50	89.899	Nomascus_leucogenys
ENSTNIG00000017285	rpl13a	100	77.778	ENSMEUG00000005199	RPL13A	57	77.778	Notamacropus_eugenii
ENSTNIG00000017285	rpl13a	100	94.949	ENSODEG00000016831	-	56	94.949	Octodon_degus
ENSTNIG00000017285	rpl13a	100	81.818	ENSOCUG00000026592	-	61	81.818	Oryctolagus_cuniculus
ENSTNIG00000017285	rpl13a	75	79.730	ENSPPAG00000003538	-	73	78.481	Pan_paniscus
ENSTNIG00000017285	rpl13a	100	93.939	ENSPPRG00000011265	RPL13A	63	94.382	Panthera_pardus
ENSTNIG00000017285	rpl13a	85	94.048	ENSPTRG00000052284	-	58	94.048	Pan_troglodytes
ENSTNIG00000017285	rpl13a	71	78.571	ENSPTRG00000044469	-	63	78.571	Pan_troglodytes
ENSTNIG00000017285	rpl13a	90	94.382	ENSPTRG00000042978	-	63	94.382	Pan_troglodytes
ENSTNIG00000017285	rpl13a	99	95.918	ENSPSIG00000018234	RPL13A	53	95.918	Pelodiscus_sinensis
ENSTNIG00000017285	rpl13a	100	94.949	ENSPEMG00000009221	-	56	94.949	Peromyscus_maniculatus_bairdii
ENSTNIG00000017285	rpl13a	100	75.758	ENSPCIG00000014063	-	52	75.758	Phascolarctos_cinereus
ENSTNIG00000017285	rpl13a	100	79.798	ENSPCOG00000016293	-	50	79.798	Propithecus_coquereli
ENSTNIG00000017285	rpl13a	100	92.929	ENSRROG00000036041	-	51	92.929	Rhinopithecus_roxellana
ENSTNIG00000017285	rpl13a	100	63.636	YNL069C	RPL16B	50	63.636	Saccharomyces_cerevisiae
ENSTNIG00000017285	rpl13a	100	65.657	YIL133C	RPL16A	50	65.657	Saccharomyces_cerevisiae
ENSTNIG00000017285	rpl13a	100	92.929	ENSSBOG00000028481	RPL13A	50	92.929	Saimiri_boliviensis_boliviensis
ENSTNIG00000017285	rpl13a	91	70.093	ENSSBOG00000024635	-	50	70.093	Saimiri_boliviensis_boliviensis
ENSTNIG00000017285	rpl13a	100	96.970	ENSSFOG00015001972	rpl13a	54	96.970	Scleropages_formosus
ENSTNIG00000017285	rpl13a	100	96.970	ENSSDUG00000017181	rpl13a	50	96.970	Seriola_dumerili
ENSTNIG00000017285	rpl13a	100	64.646	ENSSLDG00000007920	-	50	64.646	Seriola_lalandi_dorsalis
ENSTNIG00000017285	rpl13a	79	92.308	ENSSPUG00000014548	RPL13A	67	92.308	Sphenodon_punctatus
ENSTNIG00000017285	rpl13a	100	81.818	ENSSSCG00000031204	-	58	81.818	Sus_scrofa
ENSTNIG00000017285	rpl13a	84	95.181	ENSTGUG00000017025	RPL13A	100	95.181	Taeniopygia_guttata
ENSTNIG00000017285	rpl13a	100	93.939	ENSVVUG00000022597	RPL13A	52	93.939	Vulpes_vulpes