EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000017329 (Gene tree)
Gene ID: -
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 1936 bases
Position: chr10:6223638-6225573
Accession: ZDB-GENE-120411-43
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020467	PseudoU_synth_2	PF00849.22	1.9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020699	-	1555	-	ENSTNIP00000020467	500 (aa)	-	H3DIX3

Gene Model

Click here to download ENSTNIG00000017329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017329	rpusd2	91	58.206	ENSG00000166133	RPUSD2	80	58.691	Homo_sapiens
ENSTNIG00000017329	rpusd2	99	73.231	ENSAPOG00000000817	rpusd2	91	73.231	Acanthochromis_polyacanthus
ENSTNIG00000017329	rpusd2	95	56.522	ENSAMEG00000016996	RPUSD2	80	58.889	Ailuropoda_melanoleuca
ENSTNIG00000017329	rpusd2	100	76.877	ENSACIG00000024029	rpusd2	99	76.877	Amphilophus_citrinellus
ENSTNIG00000017329	rpusd2	99	71.374	ENSAOCG00000015237	rpusd2	91	71.374	Amphiprion_ocellaris
ENSTNIG00000017329	rpusd2	99	71.947	ENSAPEG00000021763	rpusd2	91	71.947	Amphiprion_percula
ENSTNIG00000017329	rpusd2	99	73.333	ENSATEG00000015242	rpusd2	88	73.333	Anabas_testudineus
ENSTNIG00000017329	rpusd2	86	59.441	ENSAPLG00000004723	RPUSD2	100	58.508	Anas_platyrhynchos
ENSTNIG00000017329	rpusd2	89	58.797	ENSACAG00000013893	RPUSD2	91	58.797	Anolis_carolinensis
ENSTNIG00000017329	rpusd2	95	56.994	ENSANAG00000009691	RPUSD2	80	58.797	Aotus_nancymaae
ENSTNIG00000017329	rpusd2	99	72.427	ENSACLG00000019531	rpusd2	89	72.427	Astatotilapia_calliptera
ENSTNIG00000017329	rpusd2	95	66.085	ENSAMXG00000013376	rpusd2	85	65.192	Astyanax_mexicanus
ENSTNIG00000017329	rpusd2	96	56.224	ENSBTAG00000003193	RPUSD2	79	58.427	Bos_taurus
ENSTNIG00000017329	rpusd2	81	35.627	WBGene00019498	K07E8.7	97	35.627	Caenorhabditis_elegans
ENSTNIG00000017329	rpusd2	95	56.549	ENSCJAG00000020841	RPUSD2	80	58.315	Callithrix_jacchus
ENSTNIG00000017329	rpusd2	95	55.672	ENSCAFG00000009165	RPUSD2	79	57.788	Canis_familiaris
ENSTNIG00000017329	rpusd2	95	55.672	ENSCAFG00020005849	RPUSD2	79	57.788	Canis_lupus_dingo
ENSTNIG00000017329	rpusd2	96	56.159	ENSCHIG00000006152	RPUSD2	79	58.202	Capra_hircus
ENSTNIG00000017329	rpusd2	95	56.723	ENSTSYG00000012844	RPUSD2	81	58.427	Carlito_syrichta
ENSTNIG00000017329	rpusd2	54	61.624	ENSCAPG00000006895	-	93	61.624	Cavia_aperea
ENSTNIG00000017329	rpusd2	97	56.379	ENSCPOG00000013201	RPUSD2	80	58.784	Cavia_porcellus
ENSTNIG00000017329	rpusd2	95	56.965	ENSCCAG00000024378	RPUSD2	80	58.758	Cebus_capucinus
ENSTNIG00000017329	rpusd2	91	57.642	ENSCATG00000043734	RPUSD2	80	58.202	Cercocebus_atys
ENSTNIG00000017329	rpusd2	96	57.708	ENSCLAG00000011862	RPUSD2	80	59.955	Chinchilla_lanigera
ENSTNIG00000017329	rpusd2	91	57.642	ENSCSAG00000007538	RPUSD2	85	58.202	Chlorocebus_sabaeus
ENSTNIG00000017329	rpusd2	70	55.014	ENSCHOG00000004834	RPUSD2	63	56.322	Choloepus_hoffmanni
ENSTNIG00000017329	rpusd2	92	57.732	ENSCPBG00000013419	RPUSD2	88	58.422	Chrysemys_picta_bellii
ENSTNIG00000017329	rpusd2	53	41.199	ENSCSAVG00000007812	-	90	41.199	Ciona_savignyi
ENSTNIG00000017329	rpusd2	91	57.642	ENSCANG00000003659	RPUSD2	80	58.202	Colobus_angolensis_palliatus
ENSTNIG00000017329	rpusd2	91	58.643	ENSCGRG00001009839	Rpusd2	76	59.234	Cricetulus_griseus_chok1gshd
ENSTNIG00000017329	rpusd2	91	58.643	ENSCGRG00000012348	Rpusd2	78	59.234	Cricetulus_griseus_crigri
ENSTNIG00000017329	rpusd2	99	69.048	ENSCSEG00000001953	rpusd2	87	68.849	Cynoglossus_semilaevis
ENSTNIG00000017329	rpusd2	100	74.900	ENSCVAG00000010848	rpusd2	89	74.900	Cyprinodon_variegatus
ENSTNIG00000017329	rpusd2	96	67.748	ENSDARG00000060992	rpusd2	83	67.748	Danio_rerio
ENSTNIG00000017329	rpusd2	96	54.772	ENSDNOG00000047745	RPUSD2	81	56.982	Dasypus_novemcinctus
ENSTNIG00000017329	rpusd2	88	59.637	ENSDORG00000009092	Rpusd2	99	59.637	Dipodomys_ordii
ENSTNIG00000017329	rpusd2	94	42.545	FBgn0051719	RluA-1	63	43.991	Drosophila_melanogaster
ENSTNIG00000017329	rpusd2	86	44.091	FBgn0032256	RluA-2	78	44.091	Drosophila_melanogaster
ENSTNIG00000017329	rpusd2	99	55.734	ENSETEG00000008581	RPUSD2	82	59.009	Echinops_telfairi
ENSTNIG00000017329	rpusd2	85	34.475	ENSEBUG00000012149	rpusd2	84	34.475	Eptatretus_burgeri
ENSTNIG00000017329	rpusd2	95	56.367	ENSEASG00005016463	RPUSD2	78	58.427	Equus_asinus_asinus
ENSTNIG00000017329	rpusd2	95	56.576	ENSECAG00000024178	RPUSD2	78	58.652	Equus_caballus
ENSTNIG00000017329	rpusd2	92	51.620	ENSEEUG00000005132	RPUSD2	83	52.000	Erinaceus_europaeus
ENSTNIG00000017329	rpusd2	98	67.665	ENSELUG00000016786	rpusd2	91	67.465	Esox_lucius
ENSTNIG00000017329	rpusd2	95	56.604	ENSFCAG00000040796	RPUSD2	79	58.784	Felis_catus
ENSTNIG00000017329	rpusd2	87	60.360	ENSFALG00000001122	RPUSD2	97	60.573	Ficedula_albicollis
ENSTNIG00000017329	rpusd2	96	56.576	ENSFDAG00000003070	RPUSD2	85	58.916	Fukomys_damarensis
ENSTNIG00000017329	rpusd2	96	75.410	ENSFHEG00000007518	rpusd2	88	75.410	Fundulus_heteroclitus
ENSTNIG00000017329	rpusd2	95	72.407	ENSGMOG00000011014	rpusd2	98	72.407	Gadus_morhua
ENSTNIG00000017329	rpusd2	94	55.714	ENSGALG00000041216	RPUSD2	94	57.296	Gallus_gallus
ENSTNIG00000017329	rpusd2	95	77.778	ENSGAFG00000003390	rpusd2	84	77.778	Gambusia_affinis
ENSTNIG00000017329	rpusd2	99	72.266	ENSGACG00000008656	rpusd2	98	72.266	Gasterosteus_aculeatus
ENSTNIG00000017329	rpusd2	92	61.388	ENSGAGG00000013098	RPUSD2	85	62.247	Gopherus_agassizii
ENSTNIG00000017329	rpusd2	91	57.675	ENSGGOG00000006684	RPUSD2	80	58.145	Gorilla_gorilla
ENSTNIG00000017329	rpusd2	99	72.621	ENSHBUG00000023777	rpusd2	89	72.621	Haplochromis_burtoni
ENSTNIG00000017329	rpusd2	95	57.082	ENSHGLG00000012765	RPUSD2	80	58.824	Heterocephalus_glaber_female
ENSTNIG00000017329	rpusd2	95	57.082	ENSHGLG00100006653	RPUSD2	80	58.824	Heterocephalus_glaber_male
ENSTNIG00000017329	rpusd2	95	75.258	ENSHCOG00000015587	rpusd2	82	75.258	Hippocampus_comes
ENSTNIG00000017329	rpusd2	95	71.959	ENSIPUG00000021006	rpusd2	81	71.605	Ictalurus_punctatus
ENSTNIG00000017329	rpusd2	94	56.148	ENSSTOG00000025619	RPUSD2	79	57.860	Ictidomys_tridecemlineatus
ENSTNIG00000017329	rpusd2	89	59.865	ENSJJAG00000023160	Rpusd2	82	59.865	Jaculus_jaculus
ENSTNIG00000017329	rpusd2	99	72.147	ENSKMAG00000006618	rpusd2	87	72.147	Kryptolebias_marmoratus
ENSTNIG00000017329	rpusd2	98	73.373	ENSLBEG00000021571	rpusd2	89	73.190	Labrus_bergylta
ENSTNIG00000017329	rpusd2	88	59.081	ENSLACG00000017338	RPUSD2	99	59.081	Latimeria_chalumnae
ENSTNIG00000017329	rpusd2	97	65.503	ENSLOCG00000014755	rpusd2	97	65.503	Lepisosteus_oculatus
ENSTNIG00000017329	rpusd2	95	56.604	ENSLAFG00000015588	RPUSD2	83	58.652	Loxodonta_africana
ENSTNIG00000017329	rpusd2	91	57.860	ENSMFAG00000045062	RPUSD2	80	58.427	Macaca_fascicularis
ENSTNIG00000017329	rpusd2	91	57.860	ENSMMUG00000001483	RPUSD2	80	58.427	Macaca_mulatta
ENSTNIG00000017329	rpusd2	91	50.108	ENSMNEG00000041429	RPUSD2	80	50.442	Macaca_nemestrina
ENSTNIG00000017329	rpusd2	69	56.160	ENSMLEG00000036551	RPUSD2	80	56.160	Mandrillus_leucophaeus
ENSTNIG00000017329	rpusd2	99	71.321	ENSMAMG00000001077	rpusd2	87	71.321	Mastacembelus_armatus
ENSTNIG00000017329	rpusd2	99	72.427	ENSMZEG00005006947	rpusd2	98	72.427	Maylandia_zebra
ENSTNIG00000017329	rpusd2	90	59.556	ENSMGAG00000003058	RPUSD2	97	59.955	Meleagris_gallopavo
ENSTNIG00000017329	rpusd2	96	56.612	ENSMAUG00000020467	Rpusd2	78	58.784	Mesocricetus_auratus
ENSTNIG00000017329	rpusd2	94	57.234	ENSMICG00000028637	RPUSD2	80	58.333	Microcebus_murinus
ENSTNIG00000017329	rpusd2	91	58.206	ENSMOCG00000020061	Rpusd2	79	58.784	Microtus_ochrogaster
ENSTNIG00000017329	rpusd2	99	77.734	ENSMMOG00000012020	rpusd2	90	76.893	Mola_mola
ENSTNIG00000017329	rpusd2	91	59.389	ENSMODG00000000300	RPUSD2	80	59.910	Monodelphis_domestica
ENSTNIG00000017329	rpusd2	99	69.318	ENSMALG00000010024	rpusd2	88	69.318	Monopterus_albus
ENSTNIG00000017329	rpusd2	91	58.170	MGP_CAROLIEiJ_G0024130	Rpusd2	78	58.744	Mus_caroli
ENSTNIG00000017329	rpusd2	91	58.206	ENSMUSG00000027324	Rpusd2	78	58.784	Mus_musculus
ENSTNIG00000017329	rpusd2	91	58.862	MGP_PahariEiJ_G0025573	Rpusd2	78	59.459	Mus_pahari
ENSTNIG00000017329	rpusd2	91	57.987	MGP_SPRETEiJ_G0025046	Rpusd2	79	58.559	Mus_spretus
ENSTNIG00000017329	rpusd2	96	55.809	ENSMPUG00000008517	RPUSD2	85	55.858	Mustela_putorius_furo
ENSTNIG00000017329	rpusd2	91	58.606	ENSMLUG00000007971	RPUSD2	87	59.060	Myotis_lucifugus
ENSTNIG00000017329	rpusd2	94	58.120	ENSNGAG00000014126	Rpusd2	80	59.910	Nannospalax_galili
ENSTNIG00000017329	rpusd2	99	74.800	ENSNBRG00000010070	rpusd2	88	74.800	Neolamprologus_brichardi
ENSTNIG00000017329	rpusd2	91	57.860	ENSNLEG00000035735	RPUSD2	80	58.333	Nomascus_leucogenys
ENSTNIG00000017329	rpusd2	93	58.925	ENSMEUG00000008500	RPUSD2	84	60.135	Notamacropus_eugenii
ENSTNIG00000017329	rpusd2	95	58.071	ENSOPRG00000014177	-	81	60.000	Ochotona_princeps
ENSTNIG00000017329	rpusd2	92	59.170	ENSODEG00000017193	RPUSD2	81	59.955	Octodon_degus
ENSTNIG00000017329	rpusd2	100	74.314	ENSONIG00000020102	rpusd2	100	74.314	Oreochromis_niloticus
ENSTNIG00000017329	rpusd2	51	68.093	ENSOANG00000011262	-	100	68.093	Ornithorhynchus_anatinus
ENSTNIG00000017329	rpusd2	91	59.607	ENSOCUG00000015745	RPUSD2	78	60.225	Oryctolagus_cuniculus
ENSTNIG00000017329	rpusd2	95	73.333	ENSORLG00000015516	rpusd2	86	73.333	Oryzias_latipes
ENSTNIG00000017329	rpusd2	95	72.917	ENSORLG00020010533	rpusd2	86	72.917	Oryzias_latipes_hni
ENSTNIG00000017329	rpusd2	99	69.882	ENSORLG00015009206	rpusd2	89	69.882	Oryzias_latipes_hsok
ENSTNIG00000017329	rpusd2	99	72.854	ENSOMEG00000007355	rpusd2	82	72.854	Oryzias_melastigma
ENSTNIG00000017329	rpusd2	91	57.174	ENSOGAG00000004867	RPUSD2	84	57.718	Otolemur_garnettii
ENSTNIG00000017329	rpusd2	89	58.427	ENSOARG00000020235	RPUSD2	81	58.427	Ovis_aries
ENSTNIG00000017329	rpusd2	91	58.425	ENSPPAG00000032874	RPUSD2	80	58.916	Pan_paniscus
ENSTNIG00000017329	rpusd2	96	56.017	ENSPPRG00000010446	RPUSD2	80	58.239	Panthera_pardus
ENSTNIG00000017329	rpusd2	96	56.017	ENSPTIG00000013316	RPUSD2	80	58.239	Panthera_tigris_altaica
ENSTNIG00000017329	rpusd2	91	58.206	ENSPTRG00000006924	RPUSD2	80	58.691	Pan_troglodytes
ENSTNIG00000017329	rpusd2	91	57.642	ENSPANG00000019339	RPUSD2	80	58.202	Papio_anubis
ENSTNIG00000017329	rpusd2	94	62.384	ENSPKIG00000023017	rpusd2	81	62.384	Paramormyrops_kingsleyae
ENSTNIG00000017329	rpusd2	70	57.703	ENSPSIG00000012680	RPUSD2	100	57.143	Pelodiscus_sinensis
ENSTNIG00000017329	rpusd2	96	72.385	ENSPMGG00000018165	rpusd2	83	72.385	Periophthalmus_magnuspinnatus
ENSTNIG00000017329	rpusd2	92	57.734	ENSPEMG00000012878	Rpusd2	82	58.296	Peromyscus_maniculatus_bairdii
ENSTNIG00000017329	rpusd2	92	57.826	ENSPCIG00000023199	RPUSD2	80	59.009	Phascolarctos_cinereus
ENSTNIG00000017329	rpusd2	96	77.131	ENSPFOG00000006829	rpusd2	86	77.131	Poecilia_formosa
ENSTNIG00000017329	rpusd2	96	76.923	ENSPLAG00000022914	rpusd2	97	76.605	Poecilia_latipinna
ENSTNIG00000017329	rpusd2	96	76.923	ENSPMEG00000009835	rpusd2	97	76.605	Poecilia_mexicana
ENSTNIG00000017329	rpusd2	96	77.547	ENSPREG00000016441	rpusd2	82	77.547	Poecilia_reticulata
ENSTNIG00000017329	rpusd2	93	56.780	ENSPPYG00000006355	RPUSD2	80	58.333	Pongo_abelii
ENSTNIG00000017329	rpusd2	96	56.133	ENSPCOG00000028019	RPUSD2	80	58.876	Propithecus_coquereli
ENSTNIG00000017329	rpusd2	90	58.590	ENSPVAG00000001837	RPUSD2	80	58.652	Pteropus_vampyrus
ENSTNIG00000017329	rpusd2	97	76.082	ENSPNYG00000021507	rpusd2	94	76.082	Pundamilia_nyererei
ENSTNIG00000017329	rpusd2	91	58.079	ENSRNOG00000010528	LOC100911166	78	58.652	Rattus_norvegicus
ENSTNIG00000017329	rpusd2	91	58.079	ENSRNOG00000046797	Rpusd2	78	58.652	Rattus_norvegicus
ENSTNIG00000017329	rpusd2	91	57.642	ENSRBIG00000030813	RPUSD2	80	58.202	Rhinopithecus_bieti
ENSTNIG00000017329	rpusd2	91	57.424	ENSRROG00000026664	RPUSD2	80	57.978	Rhinopithecus_roxellana
ENSTNIG00000017329	rpusd2	58	45.973	YOL066C	RIB2	50	45.973	Saccharomyces_cerevisiae
ENSTNIG00000017329	rpusd2	55	46.975	YDL036C	-	60	46.975	Saccharomyces_cerevisiae
ENSTNIG00000017329	rpusd2	95	56.604	ENSSBOG00000035031	RPUSD2	80	58.613	Saimiri_boliviensis_boliviensis
ENSTNIG00000017329	rpusd2	70	57.593	ENSSHAG00000015108	RPUSD2	90	57.593	Sarcophilus_harrisii
ENSTNIG00000017329	rpusd2	95	56.514	ENSSFOG00015019057	rpusd2	81	56.514	Scleropages_formosus
ENSTNIG00000017329	rpusd2	99	74.757	ENSSMAG00000000903	rpusd2	98	74.757	Scophthalmus_maximus
ENSTNIG00000017329	rpusd2	99	71.321	ENSSDUG00000019139	rpusd2	88	71.321	Seriola_dumerili
ENSTNIG00000017329	rpusd2	99	71.321	ENSSLDG00000005938	rpusd2	88	71.321	Seriola_lalandi_dorsalis
ENSTNIG00000017329	rpusd2	95	56.504	ENSSARG00000002792	RPUSD2	81	59.243	Sorex_araneus
ENSTNIG00000017329	rpusd2	92	56.632	ENSSPUG00000001206	RPUSD2	89	57.328	Sphenodon_punctatus
ENSTNIG00000017329	rpusd2	99	74.111	ENSSPAG00000003578	rpusd2	88	74.111	Stegastes_partitus
ENSTNIG00000017329	rpusd2	95	56.994	ENSSSCG00000036700	RPUSD2	79	59.101	Sus_scrofa
ENSTNIG00000017329	rpusd2	100	80.344	ENSTRUG00000025880	rpusd2	99	80.916	Takifugu_rubripes
ENSTNIG00000017329	rpusd2	93	50.955	ENSTBEG00000007933	RPUSD2	80	52.144	Tupaia_belangeri
ENSTNIG00000017329	rpusd2	91	58.681	ENSTTRG00000010585	RPUSD2	80	59.101	Tursiops_truncatus
ENSTNIG00000017329	rpusd2	91	58.405	ENSUAMG00000001470	RPUSD2	86	59.111	Ursus_americanus
ENSTNIG00000017329	rpusd2	95	56.108	ENSUMAG00000012487	RPUSD2	70	58.444	Ursus_maritimus
ENSTNIG00000017329	rpusd2	92	58.369	ENSVPAG00000003844	RPUSD2	80	59.424	Vicugna_pacos
ENSTNIG00000017329	rpusd2	95	55.672	ENSVVUG00000026590	RPUSD2	79	57.788	Vulpes_vulpes
ENSTNIG00000017329	rpusd2	91	58.079	ENSXETG00000015973	rpusd2	95	58.744	Xenopus_tropicalis
ENSTNIG00000017329	rpusd2	98	75.918	ENSXMAG00000021821	rpusd2	99	75.918	Xiphophorus_maculatus