EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017585 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 5822 bases
Position: chr12:8155689-8161510
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020731	ResIII	PF04851.15	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000020964	-	2619	-	ENSTNIP00000020731	872 (aa)	-	H3DJN5

Gene Model

Click here to download ENSTNIG00000017585's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017585's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017585	smarcad1a	57	31.120	ENSTNIG00000018370	rad54b	50	31.440
ENSTNIG00000017585	smarcad1a	57	37.698	ENSTNIG00000004902	chd1l	53	37.698
ENSTNIG00000017585	smarcad1a	54	30.268	ENSTNIG00000001002	ercc6l	87	30.268
ENSTNIG00000017585	smarcad1a	58	34.414	ENSTNIG00000003738	hells	66	34.414

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017585	smarcad1a	99	57.666	ENSG00000163104	SMARCAD1	99	68.067	Homo_sapiens
ENSTNIG00000017585	smarcad1a	98	86.305	ENSAPOG00000011446	smarcad1a	91	86.305	Acanthochromis_polyacanthus
ENSTNIG00000017585	smarcad1a	99	57.617	ENSAMEG00000005844	SMARCAD1	84	57.617	Ailuropoda_melanoleuca
ENSTNIG00000017585	smarcad1a	88	78.460	ENSACIG00000018326	smarcad1a	93	86.254	Amphilophus_citrinellus
ENSTNIG00000017585	smarcad1a	99	86.876	ENSAOCG00000019762	smarcad1a	91	84.405	Amphiprion_ocellaris
ENSTNIG00000017585	smarcad1a	99	86.733	ENSAPEG00000003889	smarcad1a	91	84.521	Amphiprion_percula
ENSTNIG00000017585	smarcad1a	95	86.784	ENSATEG00000015608	smarcad1a	94	85.735	Anabas_testudineus
ENSTNIG00000017585	smarcad1a	99	57.011	ENSAPLG00000004630	SMARCAD1	90	57.798	Anas_platyrhynchos
ENSTNIG00000017585	smarcad1a	99	55.074	ENSACAG00000013554	SMARCAD1	86	55.157	Anolis_carolinensis
ENSTNIG00000017585	smarcad1a	99	57.551	ENSANAG00000020488	SMARCAD1	95	57.225	Aotus_nancymaae
ENSTNIG00000017585	smarcad1a	97	85.307	ENSACLG00000017063	smarcad1a	86	85.307	Astatotilapia_calliptera
ENSTNIG00000017585	smarcad1a	79	69.099	ENSAMXG00000015470	smarcad1a	98	68.661	Astyanax_mexicanus
ENSTNIG00000017585	smarcad1a	91	66.504	ENSAMXG00000019130	smarcad1b	87	66.626	Astyanax_mexicanus
ENSTNIG00000017585	smarcad1a	99	57.763	ENSBTAG00000017061	SMARCAD1	84	57.437	Bos_taurus
ENSTNIG00000017585	smarcad1a	74	42.185	WBGene00010845	M03C11.8	74	39.812	Caenorhabditis_elegans
ENSTNIG00000017585	smarcad1a	99	57.666	ENSCJAG00000006778	SMARCAD1	84	57.339	Callithrix_jacchus
ENSTNIG00000017585	smarcad1a	99	57.732	ENSCAFG00000010026	SMARCAD1	85	57.732	Canis_familiaris
ENSTNIG00000017585	smarcad1a	99	58.009	ENSCAFG00020003994	SMARCAD1	97	57.683	Canis_lupus_dingo
ENSTNIG00000017585	smarcad1a	99	57.617	ENSCHIG00000012905	SMARCAD1	84	57.617	Capra_hircus
ENSTNIG00000017585	smarcad1a	99	57.666	ENSTSYG00000002706	SMARCAD1	84	57.339	Carlito_syrichta
ENSTNIG00000017585	smarcad1a	93	51.530	ENSCAPG00000016744	SMARCAD1	89	51.471	Cavia_aperea
ENSTNIG00000017585	smarcad1a	99	57.520	ENSCPOG00000011398	SMARCAD1	84	57.192	Cavia_porcellus
ENSTNIG00000017585	smarcad1a	99	57.780	ENSCCAG00000022264	SMARCAD1	99	68.235	Cebus_capucinus
ENSTNIG00000017585	smarcad1a	99	57.666	ENSCATG00000035663	SMARCAD1	97	57.339	Cercocebus_atys
ENSTNIG00000017585	smarcad1a	96	58.137	ENSCSAG00000004186	SMARCAD1	100	57.801	Chlorocebus_sabaeus
ENSTNIG00000017585	smarcad1a	99	57.930	ENSCPBG00000013203	SMARCAD1	85	57.432	Chrysemys_picta_bellii
ENSTNIG00000017585	smarcad1a	76	49.180	ENSCING00000001688	-	99	49.180	Ciona_intestinalis
ENSTNIG00000017585	smarcad1a	99	57.780	ENSCANG00000003556	SMARCAD1	99	68.067	Colobus_angolensis_palliatus
ENSTNIG00000017585	smarcad1a	99	57.208	ENSCGRG00001015056	Smarcad1	85	56.881	Cricetulus_griseus_chok1gshd
ENSTNIG00000017585	smarcad1a	99	57.208	ENSCGRG00000014087	Smarcad1	85	56.881	Cricetulus_griseus_crigri
ENSTNIG00000017585	smarcad1a	96	80.456	ENSCSEG00000017903	smarcad1a	91	67.322	Cynoglossus_semilaevis
ENSTNIG00000017585	smarcad1a	99	79.858	ENSCSEG00000014419	-	91	79.858	Cynoglossus_semilaevis
ENSTNIG00000017585	smarcad1a	93	65.939	ENSDARG00000073721	smarcad1b	84	67.329	Danio_rerio
ENSTNIG00000017585	smarcad1a	99	62.652	ENSDARG00000014041	smarcad1a	92	63.164	Danio_rerio
ENSTNIG00000017585	smarcad1a	99	57.517	ENSDNOG00000000806	-	84	57.192	Dasypus_novemcinctus
ENSTNIG00000017585	smarcad1a	99	56.448	ENSDORG00000012331	Smarcad1	85	56.328	Dipodomys_ordii
ENSTNIG00000017585	smarcad1a	94	38.756	FBgn0032157	Etl1	92	38.146	Drosophila_melanogaster
ENSTNIG00000017585	smarcad1a	72	46.468	ENSEBUG00000003969	smarcad1a	96	46.624	Eptatretus_burgeri
ENSTNIG00000017585	smarcad1a	99	57.241	ENSEASG00005012382	SMARCAD1	89	55.569	Equus_asinus_asinus
ENSTNIG00000017585	smarcad1a	99	57.241	ENSECAG00000011562	SMARCAD1	84	57.241	Equus_caballus
ENSTNIG00000017585	smarcad1a	92	62.940	ENSELUG00000019154	smarcad1b	80	63.934	Esox_lucius
ENSTNIG00000017585	smarcad1a	99	70.153	ENSELUG00000018535	smarcad1a	90	69.466	Esox_lucius
ENSTNIG00000017585	smarcad1a	99	57.350	ENSFCAG00000003958	SMARCAD1	99	68.403	Felis_catus
ENSTNIG00000017585	smarcad1a	99	57.370	ENSFALG00000006089	SMARCAD1	85	57.644	Ficedula_albicollis
ENSTNIG00000017585	smarcad1a	99	57.895	ENSFDAG00000017027	SMARCAD1	84	57.683	Fukomys_damarensis
ENSTNIG00000017585	smarcad1a	99	78.827	ENSFHEG00000012778	smarcad1a	91	78.431	Fundulus_heteroclitus
ENSTNIG00000017585	smarcad1a	99	74.658	ENSGMOG00000018995	smarcad1a	99	74.658	Gadus_morhua
ENSTNIG00000017585	smarcad1a	89	59.137	ENSGALG00000037339	SMARCAD1	94	59.137	Gallus_gallus
ENSTNIG00000017585	smarcad1a	95	79.399	ENSGAFG00000013498	smarcad1a	91	65.312	Gambusia_affinis
ENSTNIG00000017585	smarcad1a	99	78.905	ENSGACG00000007327	smarcad1a	99	79.019	Gasterosteus_aculeatus
ENSTNIG00000017585	smarcad1a	99	58.043	ENSGAGG00000008582	SMARCAD1	85	57.883	Gopherus_agassizii
ENSTNIG00000017585	smarcad1a	99	57.666	ENSGGOG00000023001	SMARCAD1	84	57.339	Gorilla_gorilla
ENSTNIG00000017585	smarcad1a	97	85.449	ENSHBUG00000011042	smarcad1a	86	85.449	Haplochromis_burtoni
ENSTNIG00000017585	smarcad1a	99	58.009	ENSHGLG00000005070	SMARCAD1	84	57.683	Heterocephalus_glaber_female
ENSTNIG00000017585	smarcad1a	99	58.009	ENSHGLG00100006812	SMARCAD1	84	57.683	Heterocephalus_glaber_male
ENSTNIG00000017585	smarcad1a	96	75.536	ENSHCOG00000007848	smarcad1a	83	76.000	Hippocampus_comes
ENSTNIG00000017585	smarcad1a	97	67.168	ENSIPUG00000000242	smarcad1a	96	60.170	Ictalurus_punctatus
ENSTNIG00000017585	smarcad1a	94	64.904	ENSIPUG00000022817	smarcad1b	86	66.419	Ictalurus_punctatus
ENSTNIG00000017585	smarcad1a	99	57.110	ENSSTOG00000001227	SMARCAD1	84	57.110	Ictidomys_tridecemlineatus
ENSTNIG00000017585	smarcad1a	99	57.551	ENSJJAG00000022342	Smarcad1	84	57.225	Jaculus_jaculus
ENSTNIG00000017585	smarcad1a	96	81.871	ENSKMAG00000021351	smarcad1a	82	79.635	Kryptolebias_marmoratus
ENSTNIG00000017585	smarcad1a	98	84.571	ENSLBEG00000008088	smarcad1a	84	83.473	Labrus_bergylta
ENSTNIG00000017585	smarcad1a	99	63.483	ENSLOCG00000012909	smarcad1a	88	64.840	Lepisosteus_oculatus
ENSTNIG00000017585	smarcad1a	99	56.150	ENSLAFG00000000040	SMARCAD1	84	56.150	Loxodonta_africana
ENSTNIG00000017585	smarcad1a	99	56.872	ENSMFAG00000042606	SMARCAD1	99	56.551	Macaca_fascicularis
ENSTNIG00000017585	smarcad1a	99	56.872	ENSMMUG00000022242	SMARCAD1	99	56.551	Macaca_mulatta
ENSTNIG00000017585	smarcad1a	99	56.872	ENSMNEG00000038117	SMARCAD1	99	68.067	Macaca_nemestrina
ENSTNIG00000017585	smarcad1a	99	57.666	ENSMLEG00000038333	SMARCAD1	99	68.067	Mandrillus_leucophaeus
ENSTNIG00000017585	smarcad1a	99	85.154	ENSMAMG00000000933	smarcad1a	91	78.868	Mastacembelus_armatus
ENSTNIG00000017585	smarcad1a	99	75.351	ENSMZEG00005005203	smarcad1a	71	82.265	Maylandia_zebra
ENSTNIG00000017585	smarcad1a	99	54.372	ENSMGAG00000005577	SMARCAD1	91	54.709	Meleagris_gallopavo
ENSTNIG00000017585	smarcad1a	99	57.666	ENSMAUG00000008417	Smarcad1	85	57.339	Mesocricetus_auratus
ENSTNIG00000017585	smarcad1a	99	57.063	ENSMICG00000009746	SMARCAD1	87	56.745	Microcebus_murinus
ENSTNIG00000017585	smarcad1a	99	57.583	ENSMOCG00000017142	Smarcad1	85	57.371	Microtus_ochrogaster
ENSTNIG00000017585	smarcad1a	90	80.774	ENSMMOG00000000275	smarcad1a	100	86.418	Mola_mola
ENSTNIG00000017585	smarcad1a	99	56.644	ENSMODG00000019268	SMARCAD1	86	55.982	Monodelphis_domestica
ENSTNIG00000017585	smarcad1a	96	57.547	MGP_CAROLIEiJ_G0028458	-	67	57.547	Mus_caroli
ENSTNIG00000017585	smarcad1a	99	57.356	ENSMUSG00000029920	Smarcad1	84	57.356	Mus_musculus
ENSTNIG00000017585	smarcad1a	99	57.471	MGP_PahariEiJ_G0022198	Smarcad1	84	57.471	Mus_pahari
ENSTNIG00000017585	smarcad1a	99	57.356	MGP_SPRETEiJ_G0029462	Smarcad1	84	57.356	Mus_spretus
ENSTNIG00000017585	smarcad1a	99	57.617	ENSMPUG00000002111	SMARCAD1	84	57.617	Mustela_putorius_furo
ENSTNIG00000017585	smarcad1a	99	57.274	ENSMLUG00000000425	SMARCAD1	84	57.061	Myotis_lucifugus
ENSTNIG00000017585	smarcad1a	99	57.323	ENSNGAG00000000810	Smarcad1	85	56.995	Nannospalax_galili
ENSTNIG00000017585	smarcad1a	77	86.222	ENSNBRG00000012749	smarcad1a	84	83.803	Neolamprologus_brichardi
ENSTNIG00000017585	smarcad1a	99	57.666	ENSNLEG00000014225	SMARCAD1	99	68.067	Nomascus_leucogenys
ENSTNIG00000017585	smarcad1a	99	57.635	ENSODEG00000004334	SMARCAD1	84	57.307	Octodon_degus
ENSTNIG00000017585	smarcad1a	73	85.826	ENSONIG00000015059	smarcad1a	90	75.854	Oreochromis_niloticus
ENSTNIG00000017585	smarcad1a	92	59.902	ENSOANG00000013764	SMARCAD1	100	58.965	Ornithorhynchus_anatinus
ENSTNIG00000017585	smarcad1a	99	57.323	ENSOCUG00000017283	SMARCAD1	84	56.995	Oryctolagus_cuniculus
ENSTNIG00000017585	smarcad1a	96	80.631	ENSORLG00000004869	smarcad1a	88	78.809	Oryzias_latipes
ENSTNIG00000017585	smarcad1a	96	80.918	ENSORLG00020020569	smarcad1a	85	81.062	Oryzias_latipes_hni
ENSTNIG00000017585	smarcad1a	96	81.062	ENSORLG00015009045	smarcad1a	88	79.224	Oryzias_latipes_hsok
ENSTNIG00000017585	smarcad1a	100	80.228	ENSOMEG00000023032	smarcad1a	89	79.749	Oryzias_melastigma
ENSTNIG00000017585	smarcad1a	99	56.816	ENSOGAG00000011444	SMARCAD1	84	56.816	Otolemur_garnettii
ENSTNIG00000017585	smarcad1a	99	57.617	ENSOARG00000017851	SMARCAD1	84	57.617	Ovis_aries
ENSTNIG00000017585	smarcad1a	99	57.666	ENSPPAG00000035715	SMARCAD1	84	57.339	Pan_paniscus
ENSTNIG00000017585	smarcad1a	99	57.350	ENSPPRG00000024756	SMARCAD1	99	68.403	Panthera_pardus
ENSTNIG00000017585	smarcad1a	99	57.333	ENSPTIG00000017868	SMARCAD1	86	57.016	Panthera_tigris_altaica
ENSTNIG00000017585	smarcad1a	99	57.666	ENSPTRG00000023126	SMARCAD1	99	68.067	Pan_troglodytes
ENSTNIG00000017585	smarcad1a	99	56.670	ENSPANG00000019757	SMARCAD1	84	56.343	Papio_anubis
ENSTNIG00000017585	smarcad1a	99	57.514	ENSPSIG00000010255	SMARCAD1	85	57.514	Pelodiscus_sinensis
ENSTNIG00000017585	smarcad1a	74	77.538	ENSPMGG00000010735	smarcad1a	97	76.281	Periophthalmus_magnuspinnatus
ENSTNIG00000017585	smarcad1a	99	50.058	ENSPEMG00000001854	Smarcad1	86	49.320	Peromyscus_maniculatus_bairdii
ENSTNIG00000017585	smarcad1a	98	49.717	ENSPMAG00000003516	smarcad1a	87	50.338	Petromyzon_marinus
ENSTNIG00000017585	smarcad1a	91	59.429	ENSPCIG00000008137	SMARCAD1	98	60.411	Phascolarctos_cinereus
ENSTNIG00000017585	smarcad1a	99	81.429	ENSPFOG00000019116	smarcad1a	86	80.478	Poecilia_formosa
ENSTNIG00000017585	smarcad1a	99	81.286	ENSPLAG00000000108	smarcad1a	86	80.337	Poecilia_latipinna
ENSTNIG00000017585	smarcad1a	99	81.429	ENSPMEG00000009155	smarcad1a	86	80.478	Poecilia_mexicana
ENSTNIG00000017585	smarcad1a	99	81.831	ENSPREG00000018185	smarcad1a	91	80.872	Poecilia_reticulata
ENSTNIG00000017585	smarcad1a	99	57.420	ENSPPYG00000014935	SMARCAD1	85	57.094	Pongo_abelii
ENSTNIG00000017585	smarcad1a	63	62.545	ENSPCOG00000020478	SMARCAD1	66	62.545	Propithecus_coquereli
ENSTNIG00000017585	smarcad1a	99	57.388	ENSPVAG00000001760	SMARCAD1	84	57.061	Pteropus_vampyrus
ENSTNIG00000017585	smarcad1a	78	85.294	ENSPNYG00000010087	smarcad1a	85	83.097	Pundamilia_nyererei
ENSTNIG00000017585	smarcad1a	93	65.380	ENSPNAG00000010099	smarcad1b	86	66.790	Pygocentrus_nattereri
ENSTNIG00000017585	smarcad1a	99	64.143	ENSPNAG00000001663	smarcad1a	91	63.787	Pygocentrus_nattereri
ENSTNIG00000017585	smarcad1a	99	57.714	ENSRNOG00000006391	Smarcad1	84	57.388	Rattus_norvegicus
ENSTNIG00000017585	smarcad1a	99	57.666	ENSRBIG00000041989	SMARCAD1	84	57.339	Rhinopithecus_bieti
ENSTNIG00000017585	smarcad1a	99	57.666	ENSRROG00000035309	SMARCAD1	84	57.339	Rhinopithecus_roxellana
ENSTNIG00000017585	smarcad1a	99	56.983	ENSSBOG00000032114	SMARCAD1	99	68.235	Saimiri_boliviensis_boliviensis
ENSTNIG00000017585	smarcad1a	99	56.546	ENSSHAG00000001279	SMARCAD1	86	56.546	Sarcophilus_harrisii
ENSTNIG00000017585	smarcad1a	87	67.700	ENSSFOG00015020909	smarcad1a	100	67.700	Scleropages_formosus
ENSTNIG00000017585	smarcad1a	99	65.155	ENSSFOG00015016814	smarcad1b	89	64.576	Scleropages_formosus
ENSTNIG00000017585	smarcad1a	99	85.877	ENSSMAG00000001326	smarcad1a	91	84.916	Scophthalmus_maximus
ENSTNIG00000017585	smarcad1a	80	86.182	ENSSDUG00000022338	smarcad1a	87	83.654	Seriola_dumerili
ENSTNIG00000017585	smarcad1a	97	85.043	ENSSLDG00000024986	smarcad1a	91	82.514	Seriola_lalandi_dorsalis
ENSTNIG00000017585	smarcad1a	68	67.953	ENSSPUG00000004633	SMARCAD1	99	67.953	Sphenodon_punctatus
ENSTNIG00000017585	smarcad1a	98	86.591	ENSSPAG00000001970	smarcad1a	91	84.552	Stegastes_partitus
ENSTNIG00000017585	smarcad1a	99	57.732	ENSSSCG00000009193	SMARCAD1	100	58.205	Sus_scrofa
ENSTNIG00000017585	smarcad1a	89	60.202	ENSTGUG00000003127	SMARCAD1	100	60.705	Taeniopygia_guttata
ENSTNIG00000017585	smarcad1a	88	70.297	ENSTBEG00000002789	SMARCAD1	69	70.297	Tupaia_belangeri
ENSTNIG00000017585	smarcad1a	99	57.829	ENSTTRG00000000226	SMARCAD1	87	57.503	Tursiops_truncatus
ENSTNIG00000017585	smarcad1a	99	57.617	ENSUAMG00000022262	SMARCAD1	84	57.617	Ursus_americanus
ENSTNIG00000017585	smarcad1a	99	57.895	ENSUMAG00000004549	SMARCAD1	84	57.569	Ursus_maritimus
ENSTNIG00000017585	smarcad1a	99	57.617	ENSVVUG00000007271	SMARCAD1	100	58.087	Vulpes_vulpes
ENSTNIG00000017585	smarcad1a	99	51.964	ENSXETG00000019214	smarcad1	100	52.483	Xenopus_tropicalis
ENSTNIG00000017585	smarcad1a	87	78.129	ENSXCOG00000005232	smarcad1a	84	77.910	Xiphophorus_couchianus
ENSTNIG00000017585	smarcad1a	97	81.259	ENSXMAG00000015350	smarcad1a	80	80.309	Xiphophorus_maculatus