EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017792 (Gene tree)
Gene ID: -
Gene Symbol: tdp2b
Alias: tdp2|ttrap|ttrapl
Full Name: tyrosyl-DNA phosphodiesterase 2b
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 2797 bases
Position: chr21_random:1717291-1720087
Accession: ZDB-GENE-050816-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020944	Exo_endo_phos	PF03372.23	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021177	-	1098	-	ENSTNIP00000020944	361 (aa)	-	H3DK98

Gene Model

Click here to download ENSTNIG00000017792's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017792's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017792	tdp2b	71	61.538	ENSTNIG00000010260	TDP2	99	61.538

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017792	tdp2b	96	52.676	ENSG00000111802	TDP2	96	52.066	Homo_sapiens
ENSTNIG00000017792	tdp2b	71	66.279	ENSAPOG00000018379	-	91	66.279	Acanthochromis_polyacanthus
ENSTNIG00000017792	tdp2b	75	55.351	ENSAMEG00000010230	TDP2	96	55.351	Ailuropoda_melanoleuca
ENSTNIG00000017792	tdp2b	72	64.504	ENSAPEG00000004208	-	93	64.504	Amphiprion_percula
ENSTNIG00000017792	tdp2b	74	64.794	ENSATEG00000010663	-	87	64.794	Anabas_testudineus
ENSTNIG00000017792	tdp2b	95	51.977	ENSACAG00000002332	TDP2	95	51.220	Anolis_carolinensis
ENSTNIG00000017792	tdp2b	96	53.803	ENSANAG00000020033	TDP2	98	52.304	Aotus_nancymaae
ENSTNIG00000017792	tdp2b	73	72.901	ENSACLG00000016174	tdp2b	89	72.901	Astatotilapia_calliptera
ENSTNIG00000017792	tdp2b	73	72.624	ENSACLG00000016132	tdp2b	89	72.624	Astatotilapia_calliptera
ENSTNIG00000017792	tdp2b	73	73.004	ENSACLG00000016148	tdp2b	94	73.004	Astatotilapia_calliptera
ENSTNIG00000017792	tdp2b	98	61.316	ENSAMXG00000011775	tdp2b	99	61.316	Astyanax_mexicanus
ENSTNIG00000017792	tdp2b	72	51.515	ENSAMXG00000036549	tdp2a	85	51.515	Astyanax_mexicanus
ENSTNIG00000017792	tdp2b	96	52.941	ENSBTAG00000000365	TDP2	94	52.941	Bos_taurus
ENSTNIG00000017792	tdp2b	98	53.297	ENSCJAG00000021963	-	96	53.297	Callithrix_jacchus
ENSTNIG00000017792	tdp2b	99	53.117	ENSCJAG00000006074	TDP2	98	53.117	Callithrix_jacchus
ENSTNIG00000017792	tdp2b	95	53.390	ENSCAFG00000010428	TDP2	99	53.390	Canis_familiaris
ENSTNIG00000017792	tdp2b	74	57.509	ENSCAFG00020009994	TDP2	93	57.509	Canis_lupus_dingo
ENSTNIG00000017792	tdp2b	79	54.007	ENSCHIG00000015294	-	92	56.364	Capra_hircus
ENSTNIG00000017792	tdp2b	87	50.309	ENSTSYG00000037199	TDP2	100	51.266	Carlito_syrichta
ENSTNIG00000017792	tdp2b	95	53.541	ENSCPOG00000006390	TDP2	100	52.011	Cavia_porcellus
ENSTNIG00000017792	tdp2b	98	53.297	ENSCCAG00000022734	TDP2	96	53.297	Cebus_capucinus
ENSTNIG00000017792	tdp2b	96	52.958	ENSCATG00000022076	TDP2	89	57.143	Cercocebus_atys
ENSTNIG00000017792	tdp2b	95	53.258	ENSCLAG00000002072	TDP2	94	53.258	Chinchilla_lanigera
ENSTNIG00000017792	tdp2b	96	52.958	ENSCSAG00000007769	TDP2	95	52.958	Chlorocebus_sabaeus
ENSTNIG00000017792	tdp2b	96	52.394	ENSCPBG00000006551	TDP2	89	51.657	Chrysemys_picta_bellii
ENSTNIG00000017792	tdp2b	96	52.676	ENSCANG00000040122	TDP2	97	52.066	Colobus_angolensis_palliatus
ENSTNIG00000017792	tdp2b	96	47.191	ENSCGRG00001000384	Tdp2	95	46.196	Cricetulus_griseus_chok1gshd
ENSTNIG00000017792	tdp2b	96	46.307	ENSCGRG00000010250	Tdp2	97	46.027	Cricetulus_griseus_crigri
ENSTNIG00000017792	tdp2b	99	76.177	ENSCVAG00000003114	tdp2b	100	76.177	Cyprinodon_variegatus
ENSTNIG00000017792	tdp2b	99	61.478	ENSDARG00000035954	tdp2b	98	61.478	Danio_rerio
ENSTNIG00000017792	tdp2b	69	51.200	ENSDARG00000069941	tdp2a	55	51.200	Danio_rerio
ENSTNIG00000017792	tdp2b	96	52.958	ENSDNOG00000044082	TDP2	93	52.958	Dasypus_novemcinctus
ENSTNIG00000017792	tdp2b	74	57.509	ENSETEG00000019096	TDP2	97	57.509	Echinops_telfairi
ENSTNIG00000017792	tdp2b	72	44.656	ENSEBUG00000006535	tdp2a	61	44.656	Eptatretus_burgeri
ENSTNIG00000017792	tdp2b	96	50.986	ENSEASG00005007656	TDP2	98	49.864	Equus_asinus_asinus
ENSTNIG00000017792	tdp2b	96	51.831	ENSECAG00000014264	TDP2	98	49.593	Equus_caballus
ENSTNIG00000017792	tdp2b	94	52.616	ENSEEUG00000010776	TDP2	92	52.616	Erinaceus_europaeus
ENSTNIG00000017792	tdp2b	81	47.973	ENSELUG00000009321	tdp2a	83	50.558	Esox_lucius
ENSTNIG00000017792	tdp2b	99	70.106	ENSELUG00000016449	tdp2b	99	70.106	Esox_lucius
ENSTNIG00000017792	tdp2b	96	52.676	ENSFCAG00000025612	TDP2	94	52.676	Felis_catus
ENSTNIG00000017792	tdp2b	96	50.423	ENSFALG00000004710	TDP2	95	50.986	Ficedula_albicollis
ENSTNIG00000017792	tdp2b	76	56.491	ENSFDAG00000006512	TDP2	98	56.491	Fukomys_damarensis
ENSTNIG00000017792	tdp2b	74	60.886	ENSFHEG00000013560	-	93	60.886	Fundulus_heteroclitus
ENSTNIG00000017792	tdp2b	96	51.549	ENSGALG00000013637	TDP2	92	51.549	Gallus_gallus
ENSTNIG00000017792	tdp2b	98	52.909	ENSGAGG00000002853	TDP2	89	52.909	Gopherus_agassizii
ENSTNIG00000017792	tdp2b	96	52.676	ENSGGOG00000014237	TDP2	96	52.066	Gorilla_gorilla
ENSTNIG00000017792	tdp2b	99	77.778	ENSHBUG00000002714	tdp2b	99	77.778	Haplochromis_burtoni
ENSTNIG00000017792	tdp2b	57	71.845	ENSHBUG00000005421	-	86	71.845	Haplochromis_burtoni
ENSTNIG00000017792	tdp2b	95	54.000	ENSHGLG00000008655	TDP2	94	54.000	Heterocephalus_glaber_female
ENSTNIG00000017792	tdp2b	95	54.000	ENSHGLG00100019087	TDP2	94	54.000	Heterocephalus_glaber_male
ENSTNIG00000017792	tdp2b	96	66.482	ENSIPUG00000013691	tdp2b	96	66.482	Ictalurus_punctatus
ENSTNIG00000017792	tdp2b	96	46.893	ENSJJAG00000021685	Tdp2	97	46.893	Jaculus_jaculus
ENSTNIG00000017792	tdp2b	72	61.923	ENSKMAG00000015485	-	84	61.923	Kryptolebias_marmoratus
ENSTNIG00000017792	tdp2b	96	52.825	ENSLACG00000008852	TDP2	95	52.825	Latimeria_chalumnae
ENSTNIG00000017792	tdp2b	75	64.621	ENSLOCG00000005817	tdp2b	99	64.621	Lepisosteus_oculatus
ENSTNIG00000017792	tdp2b	96	52.113	ENSLAFG00000002567	TDP2	97	52.113	Loxodonta_africana
ENSTNIG00000017792	tdp2b	96	53.239	ENSMFAG00000045296	TDP2	97	52.617	Macaca_fascicularis
ENSTNIG00000017792	tdp2b	96	53.239	ENSMMUG00000009803	TDP2	97	52.617	Macaca_mulatta
ENSTNIG00000017792	tdp2b	96	53.239	ENSMNEG00000038003	TDP2	97	52.617	Macaca_nemestrina
ENSTNIG00000017792	tdp2b	96	52.958	ENSMLEG00000028883	TDP2	97	52.342	Mandrillus_leucophaeus
ENSTNIG00000017792	tdp2b	99	75.623	ENSMAMG00000013654	tdp2b	100	75.623	Mastacembelus_armatus
ENSTNIG00000017792	tdp2b	99	76.389	ENSMZEG00005003950	tdp2b	99	76.389	Maylandia_zebra
ENSTNIG00000017792	tdp2b	70	72.112	ENSMZEG00005004055	tdp2b	83	72.112	Maylandia_zebra
ENSTNIG00000017792	tdp2b	63	68.584	ENSMZEG00005003980	-	74	68.584	Maylandia_zebra
ENSTNIG00000017792	tdp2b	76	71.071	ENSMZEG00005004126	tdp2b	96	71.071	Maylandia_zebra
ENSTNIG00000017792	tdp2b	75	65.809	ENSMZEG00005004103	tdp2b	91	65.809	Maylandia_zebra
ENSTNIG00000017792	tdp2b	73	71.103	ENSMZEG00005004153	tdp2b	93	71.103	Maylandia_zebra
ENSTNIG00000017792	tdp2b	74	72.285	ENSMZEG00005004077	tdp2b	91	72.285	Maylandia_zebra
ENSTNIG00000017792	tdp2b	96	52.394	ENSMGAG00000008014	TDP2	92	52.394	Meleagris_gallopavo
ENSTNIG00000017792	tdp2b	96	47.472	ENSMAUG00000014451	Tdp2	95	46.467	Mesocricetus_auratus
ENSTNIG00000017792	tdp2b	95	51.841	ENSMICG00000000039	TDP2	95	54.804	Microcebus_murinus
ENSTNIG00000017792	tdp2b	95	50.142	ENSMOCG00000002823	Tdp2	95	48.370	Microtus_ochrogaster
ENSTNIG00000017792	tdp2b	85	52.848	ENSMODG00000011653	TDP2	95	53.312	Monodelphis_domestica
ENSTNIG00000017792	tdp2b	80	61.168	ENSMALG00000005368	-	98	61.168	Monopterus_albus
ENSTNIG00000017792	tdp2b	96	48.333	MGP_CAROLIEiJ_G0018354	Tdp2	100	46.512	Mus_caroli
ENSTNIG00000017792	tdp2b	96	47.472	ENSMUSG00000035958	Tdp2	96	46.237	Mus_musculus
ENSTNIG00000017792	tdp2b	100	45.128	MGP_PahariEiJ_G0019417	Tdp2	94	46.594	Mus_pahari
ENSTNIG00000017792	tdp2b	100	47.185	MGP_SPRETEiJ_G0019220	Tdp2	95	47.185	Mus_spretus
ENSTNIG00000017792	tdp2b	96	52.113	ENSMPUG00000004516	TDP2	99	51.491	Mustela_putorius_furo
ENSTNIG00000017792	tdp2b	94	49.714	ENSMLUG00000013506	TDP2	93	49.714	Myotis_lucifugus
ENSTNIG00000017792	tdp2b	95	48.045	ENSNGAG00000001375	Tdp2	91	48.045	Nannospalax_galili
ENSTNIG00000017792	tdp2b	96	52.676	ENSNLEG00000002447	TDP2	96	52.676	Nomascus_leucogenys
ENSTNIG00000017792	tdp2b	96	53.501	ENSOPRG00000016299	TDP2	98	53.501	Ochotona_princeps
ENSTNIG00000017792	tdp2b	73	58.935	ENSODEG00000014018	TDP2	89	58.935	Octodon_degus
ENSTNIG00000017792	tdp2b	96	52.101	ENSOCUG00000013773	TDP2	94	52.101	Oryctolagus_cuniculus
ENSTNIG00000017792	tdp2b	71	61.240	ENSORLG00000001661	-	95	61.240	Oryzias_latipes
ENSTNIG00000017792	tdp2b	71	61.240	ENSORLG00020004634	-	95	61.240	Oryzias_latipes_hni
ENSTNIG00000017792	tdp2b	71	52.510	ENSORLG00015008190	-	94	52.510	Oryzias_latipes_hsok
ENSTNIG00000017792	tdp2b	71	60.232	ENSOMEG00000015899	-	93	58.893	Oryzias_melastigma
ENSTNIG00000017792	tdp2b	96	53.239	ENSOGAG00000025303	TDP2	93	53.239	Otolemur_garnettii
ENSTNIG00000017792	tdp2b	96	52.958	ENSPPAG00000029023	TDP2	96	52.342	Pan_paniscus
ENSTNIG00000017792	tdp2b	96	52.394	ENSPPRG00000015398	TDP2	94	52.394	Panthera_pardus
ENSTNIG00000017792	tdp2b	74	55.678	ENSPTIG00000018574	TDP2	93	55.678	Panthera_tigris_altaica
ENSTNIG00000017792	tdp2b	96	52.958	ENSPTRG00000017778	TDP2	96	52.342	Pan_troglodytes
ENSTNIG00000017792	tdp2b	96	52.394	ENSPANG00000017590	TDP2	97	52.342	Papio_anubis
ENSTNIG00000017792	tdp2b	97	65.193	ENSPKIG00000006483	tdp2b	97	65.193	Paramormyrops_kingsleyae
ENSTNIG00000017792	tdp2b	75	58.273	ENSPSIG00000004948	TDP2	96	58.273	Pelodiscus_sinensis
ENSTNIG00000017792	tdp2b	96	48.876	ENSPEMG00000001788	Tdp2	95	47.826	Peromyscus_maniculatus_bairdii
ENSTNIG00000017792	tdp2b	71	43.333	ENSPMAG00000001570	tdp2b	98	43.333	Petromyzon_marinus
ENSTNIG00000017792	tdp2b	97	51.811	ENSPCIG00000007316	TDP2	92	50.136	Phascolarctos_cinereus
ENSTNIG00000017792	tdp2b	73	57.034	ENSPFOG00000017990	-	95	57.034	Poecilia_formosa
ENSTNIG00000017792	tdp2b	73	56.061	ENSPLAG00000019439	-	84	56.061	Poecilia_latipinna
ENSTNIG00000017792	tdp2b	76	55.273	ENSPMEG00000010824	-	93	55.273	Poecilia_mexicana
ENSTNIG00000017792	tdp2b	96	52.394	ENSPPYG00000016282	TDP2	89	51.791	Pongo_abelii
ENSTNIG00000017792	tdp2b	95	53.824	ENSPCOG00000021415	TDP2	95	57.509	Propithecus_coquereli
ENSTNIG00000017792	tdp2b	73	66.308	ENSPNYG00000011504	tdp2b	91	66.308	Pundamilia_nyererei
ENSTNIG00000017792	tdp2b	99	74.722	ENSPNYG00000011532	tdp2b	99	74.722	Pundamilia_nyererei
ENSTNIG00000017792	tdp2b	71	56.202	ENSPNAG00000022162	tdp2a	65	56.202	Pygocentrus_nattereri
ENSTNIG00000017792	tdp2b	93	48.521	ENSRNOG00000018246	Tdp2	90	48.521	Rattus_norvegicus
ENSTNIG00000017792	tdp2b	96	52.676	ENSRBIG00000037119	TDP2	97	52.066	Rhinopithecus_bieti
ENSTNIG00000017792	tdp2b	96	52.394	ENSRROG00000005025	TDP2	89	56.410	Rhinopithecus_roxellana
ENSTNIG00000017792	tdp2b	99	52.846	ENSSBOG00000028734	TDP2	89	58.242	Saimiri_boliviensis_boliviensis
ENSTNIG00000017792	tdp2b	96	51.955	ENSSHAG00000002506	TDP2	92	51.955	Sarcophilus_harrisii
ENSTNIG00000017792	tdp2b	76	56.250	ENSSFOG00015011322	-	71	56.250	Scleropages_formosus
ENSTNIG00000017792	tdp2b	75	53.737	ENSSARG00000013547	TDP2	100	53.737	Sorex_araneus
ENSTNIG00000017792	tdp2b	96	50.704	ENSSPUG00000008288	TDP2	97	49.862	Sphenodon_punctatus
ENSTNIG00000017792	tdp2b	96	51.831	ENSSSCG00000001092	TDP2	96	51.240	Sus_scrofa
ENSTNIG00000017792	tdp2b	73	56.654	ENSTGUG00000009035	TDP2	100	56.654	Taeniopygia_guttata
ENSTNIG00000017792	tdp2b	73	59.480	ENSTRUG00000012218	-	94	59.480	Takifugu_rubripes
ENSTNIG00000017792	tdp2b	99	88.889	ENSTRUG00000014347	tdp2b	100	88.889	Takifugu_rubripes
ENSTNIG00000017792	tdp2b	96	51.549	ENSTTRG00000016376	TDP2	96	52.066	Tursiops_truncatus
ENSTNIG00000017792	tdp2b	96	50.286	ENSUAMG00000025939	TDP2	95	50.286	Ursus_americanus
ENSTNIG00000017792	tdp2b	75	55.720	ENSUMAG00000020111	TDP2	90	55.720	Ursus_maritimus
ENSTNIG00000017792	tdp2b	95	52.676	ENSXETG00000014826	tdp2	94	52.676	Xenopus_tropicalis
ENSTNIG00000017792	tdp2b	70	58.893	ENSXCOG00000010778	-	70	58.893	Xiphophorus_couchianus
ENSTNIG00000017792	tdp2b	70	59.289	ENSXMAG00000022252	-	73	59.289	Xiphophorus_maculatus