EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017816 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3243 bases
Position: chr18:538659-541901
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000020972	ResIII	PF04851.15	1.9e-05	1	1
ENSTNIP00000020972	DEAD	PF00270.29	6.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021205	-	2007	-	ENSTNIP00000020972	669 (aa)	-	H3DKC6

Gene Model

Click here to download ENSTNIG00000017816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017816's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017816	-	98	34.963	ENSTNIG00000005673	helq	83	34.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017816	-	99	46.667	ENSCSAVG00000007277	-	87	44.768	Ciona_savignyi
ENSTNIG00000017816	-	100	85.351	ENSGACG00000016100	polq	92	85.351	Gasterosteus_aculeatus
ENSTNIG00000017816	-	99	66.469	MGP_CAROLIEiJ_G0020725	Polq	53	73.404	Mus_caroli
ENSTNIG00000017816	-	99	66.667	ENSMUSG00000034206	Polq	53	73.404	Mus_musculus
ENSTNIG00000017816	-	99	66.369	MGP_PahariEiJ_G0016426	Polq	53	75.000	Mus_pahari
ENSTNIG00000017816	-	99	66.469	MGP_SPRETEiJ_G0021625	Polq	53	73.404	Mus_spretus
ENSTNIG00000017816	-	99	70.606	ENSXETG00000009913	polq	78	70.606	Xenopus_tropicalis