EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017844 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 957 bases
Position: chr2:20872615-20873571
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021003	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021236	-	564	-	ENSTNIP00000021003	187 (aa)	-	H3DKF7

Gene Model

Click here to download ENSTNIG00000017844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017844	-	84	38.608	ENSTNIG00000008717	rab18a	76	38.608
ENSTNIG00000017844	-	85	31.098	ENSTNIG00000011114	-	79	31.098
ENSTNIG00000017844	-	84	33.544	ENSTNIG00000001448	-	93	33.544
ENSTNIG00000017844	-	68	30.469	ENSTNIG00000016575	rab23	59	31.429
ENSTNIG00000017844	-	74	32.143	ENSTNIG00000018498	-	62	32.143
ENSTNIG00000017844	-	83	40.127	ENSTNIG00000013184	-	72	40.127
ENSTNIG00000017844	-	88	32.335	ENSTNIG00000001043	si:ch211-247i17.1	81	32.335
ENSTNIG00000017844	-	91	34.884	ENSTNIG00000015257	rab6bb	81	34.884
ENSTNIG00000017844	-	81	34.211	ENSTNIG00000016414	rab15	71	34.211
ENSTNIG00000017844	-	84	30.675	ENSTNIG00000001195	rab9a	80	30.675
ENSTNIG00000017844	-	74	32.857	ENSTNIG00000006650	RAB19	64	32.857
ENSTNIG00000017844	-	87	34.756	ENSTNIG00000018267	rab22a	84	34.756
ENSTNIG00000017844	-	95	35.393	ENSTNIG00000009039	rab14	77	35.393
ENSTNIG00000017844	-	87	30.952	ENSTNIG00000006596	dnajc27	62	30.952
ENSTNIG00000017844	-	79	37.333	ENSTNIG00000014859	rab12	61	37.333
ENSTNIG00000017844	-	87	43.902	ENSTNIG00000011711	rab5c	74	43.902
ENSTNIG00000017844	-	90	32.787	ENSTNIG00000012343	-	77	32.787
ENSTNIG00000017844	-	85	31.515	ENSTNIG00000001956	RAB9A	77	31.515
ENSTNIG00000017844	-	86	39.521	ENSTNIG00000005090	rab25a	76	39.521
ENSTNIG00000017844	-	86	38.509	ENSTNIG00000004004	-	87	38.509
ENSTNIG00000017844	-	85	31.098	ENSTNIG00000014604	RAB7A	79	31.098
ENSTNIG00000017844	-	86	33.951	ENSTNIG00000018319	-	81	33.951
ENSTNIG00000017844	-	85	40.000	ENSTNIG00000011081	rab11bb	73	40.000
ENSTNIG00000017844	-	91	35.260	ENSTNIG00000016831	RAB41	80	35.260
ENSTNIG00000017844	-	82	33.333	ENSTNIG00000016158	rab34b	60	33.333
ENSTNIG00000017844	-	76	30.556	ENSTNIG00000014591	rheb	78	30.556
ENSTNIG00000017844	-	82	38.710	ENSTNIG00000003472	rab2a	72	38.710
ENSTNIG00000017844	-	84	36.709	ENSTNIG00000007882	rab18b	76	36.709
ENSTNIG00000017844	-	84	35.849	ENSTNIG00000008784	-	98	35.849
ENSTNIG00000017844	-	96	42.222	ENSTNIG00000009196	rab5aa	82	42.222
ENSTNIG00000017844	-	82	30.519	ENSTNIG00000011300	si:dkey-16l2.16	73	30.519
ENSTNIG00000017844	-	84	34.810	ENSTNIG00000004511	-	98	34.810
ENSTNIG00000017844	-	66	36.290	ENSTNIG00000006917	si:cabz01085950.1	94	36.290
ENSTNIG00000017844	-	76	34.483	ENSTNIG00000001260	RAB15	68	34.483
ENSTNIG00000017844	-	76	33.103	ENSTNIG00000015000	zgc:101559	68	30.488
ENSTNIG00000017844	-	86	35.758	ENSTNIG00000003679	-	77	35.758
ENSTNIG00000017844	-	85	40.000	ENSTNIG00000013182	-	74	40.000
ENSTNIG00000017844	-	83	39.744	ENSTNIG00000002003	-	76	39.744

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017844	-	89	68.862	ENSAPOG00000011363	-	74	68.862	Acanthochromis_polyacanthus
ENSTNIG00000017844	-	84	37.888	ENSEBUG00000012680	-	66	37.888	Eptatretus_burgeri
ENSTNIG00000017844	-	88	43.976	ENSEBUG00000015845	-	75	43.976	Eptatretus_burgeri
ENSTNIG00000017844	-	87	63.580	ENSPMGG00000019723	-	81	63.580	Periophthalmus_magnuspinnatus
ENSTNIG00000017844	-	89	44.048	ENSPMAG00000001403	-	83	44.048	Petromyzon_marinus
ENSTNIG00000017844	-	92	37.158	YNL093W	-	82	37.158	Saccharomyces_cerevisiae
ENSTNIG00000017844	-	87	41.566	YOR089C	VPS21	79	41.566	Saccharomyces_cerevisiae