EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000017873 (Gene tree)
Gene ID: -
Gene Symbol: prpf6
Alias: c20orf14|fc12b02|wu:fa05f07|wu:fc12b02|zgc:65913
Full Name: PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae)
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 6663 bases
Position: chr9:5721791-5728453
Accession: ZDB-GENE-030131-2575
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021032	PRP1_N	PF06424.12	1.6e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021265	-	2826	-	ENSTNIP00000021032	941 (aa)	-	H3DKI6

Gene Model

Click here to download ENSTNIG00000017873's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017873's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017873	prpf6	100	84.989	ENSG00000101161	PRPF6	100	84.567	Homo_sapiens
ENSTNIG00000017873	prpf6	100	90.755	ENSAPOG00000010395	prpf6	96	90.755	Acanthochromis_polyacanthus
ENSTNIG00000017873	prpf6	100	84.583	ENSAMEG00000001916	PRPF6	99	84.161	Ailuropoda_melanoleuca
ENSTNIG00000017873	prpf6	100	90.755	ENSACIG00000019862	prpf6	96	90.755	Amphilophus_citrinellus
ENSTNIG00000017873	prpf6	100	90.861	ENSAOCG00000012988	prpf6	96	90.861	Amphiprion_ocellaris
ENSTNIG00000017873	prpf6	100	84.060	ENSAPEG00000008301	prpf6	100	84.272	Amphiprion_percula
ENSTNIG00000017873	prpf6	100	90.755	ENSATEG00000005581	prpf6	96	90.755	Anabas_testudineus
ENSTNIG00000017873	prpf6	100	85.518	ENSACAG00000006464	PRPF6	95	85.095	Anolis_carolinensis
ENSTNIG00000017873	prpf6	100	85.201	ENSANAG00000012661	PRPF6	100	84.895	Aotus_nancymaae
ENSTNIG00000017873	prpf6	100	90.648	ENSACLG00000025875	prpf6	96	90.648	Astatotilapia_calliptera
ENSTNIG00000017873	prpf6	99	87.261	ENSAMXG00000001929	prpf6	96	87.261	Astyanax_mexicanus
ENSTNIG00000017873	prpf6	100	85.835	ENSBTAG00000011656	PRPF6	100	85.412	Bos_taurus
ENSTNIG00000017873	prpf6	100	85.201	ENSCJAG00000010616	PRPF6	100	84.778	Callithrix_jacchus
ENSTNIG00000017873	prpf6	100	85.624	ENSCAFG00000013165	PRPF6	100	85.201	Canis_familiaris
ENSTNIG00000017873	prpf6	100	85.624	ENSCAFG00020002050	PRPF6	100	85.201	Canis_lupus_dingo
ENSTNIG00000017873	prpf6	100	85.835	ENSCHIG00000018187	PRPF6	100	85.412	Capra_hircus
ENSTNIG00000017873	prpf6	100	85.624	ENSTSYG00000007814	PRPF6	100	85.201	Carlito_syrichta
ENSTNIG00000017873	prpf6	97	84.382	ENSCAPG00000015077	PRPF6	100	83.514	Cavia_aperea
ENSTNIG00000017873	prpf6	100	85.835	ENSCPOG00000007518	PRPF6	100	85.412	Cavia_porcellus
ENSTNIG00000017873	prpf6	100	82.135	ENSCCAG00000024564	PRPF6	100	81.712	Cebus_capucinus
ENSTNIG00000017873	prpf6	100	85.095	ENSCATG00000037473	PRPF6	100	84.672	Cercocebus_atys
ENSTNIG00000017873	prpf6	100	82.135	ENSCLAG00000003854	PRPF6	100	81.712	Chinchilla_lanigera
ENSTNIG00000017873	prpf6	100	80.567	ENSCSAG00000016742	PRPF6	100	80.147	Chlorocebus_sabaeus
ENSTNIG00000017873	prpf6	75	89.136	ENSCHOG00000003315	-	90	89.136	Choloepus_hoffmanni
ENSTNIG00000017873	prpf6	100	86.138	ENSCPBG00000013964	PRPF6	96	85.714	Chrysemys_picta_bellii
ENSTNIG00000017873	prpf6	99	67.542	ENSCING00000008817	-	99	67.122	Ciona_intestinalis
ENSTNIG00000017873	prpf6	100	84.884	ENSCANG00000038230	PRPF6	100	84.461	Colobus_angolensis_palliatus
ENSTNIG00000017873	prpf6	100	85.835	ENSCGRG00001022666	Prpf6	100	85.412	Cricetulus_griseus_chok1gshd
ENSTNIG00000017873	prpf6	100	88.204	ENSCSEG00000018561	prpf6	100	88.204	Cynoglossus_semilaevis
ENSTNIG00000017873	prpf6	100	89.798	ENSCVAG00000010550	prpf6	96	89.798	Cyprinodon_variegatus
ENSTNIG00000017873	prpf6	100	87.182	ENSDARG00000091367	prpf6	99	87.182	Danio_rerio
ENSTNIG00000017873	prpf6	100	85.518	ENSDNOG00000040544	PRPF6	100	85.201	Dasypus_novemcinctus
ENSTNIG00000017873	prpf6	91	84.589	ENSDORG00000005406	Prpf6	100	84.589	Dipodomys_ordii
ENSTNIG00000017873	prpf6	99	66.880	FBgn0036828	CG6841	98	66.987	Drosophila_melanogaster
ENSTNIG00000017873	prpf6	86	87.395	ENSETEG00000004447	PRPF6	85	83.186	Echinops_telfairi
ENSTNIG00000017873	prpf6	99	80.063	ENSEBUG00000008835	prpf6	99	79.641	Eptatretus_burgeri
ENSTNIG00000017873	prpf6	100	85.729	ENSEASG00005023115	PRPF6	100	85.307	Equus_asinus_asinus
ENSTNIG00000017873	prpf6	100	81.501	ENSECAG00000013983	PRPF6	100	81.078	Equus_caballus
ENSTNIG00000017873	prpf6	82	95.833	ENSEEUG00000000180	PRPF6	73	95.833	Erinaceus_europaeus
ENSTNIG00000017873	prpf6	100	87.885	ENSELUG00000001945	prpf6	93	87.885	Esox_lucius
ENSTNIG00000017873	prpf6	100	85.941	ENSFCAG00000001183	PRPF6	100	85.518	Felis_catus
ENSTNIG00000017873	prpf6	100	85.835	ENSFALG00000010326	-	97	85.518	Ficedula_albicollis
ENSTNIG00000017873	prpf6	99	80.573	ENSFALG00000006046	-	97	80.573	Ficedula_albicollis
ENSTNIG00000017873	prpf6	100	84.461	ENSFDAG00000006451	PRPF6	100	84.038	Fukomys_damarensis
ENSTNIG00000017873	prpf6	100	90.117	ENSFHEG00000000560	prpf6	96	90.117	Fundulus_heteroclitus
ENSTNIG00000017873	prpf6	100	87.460	ENSGMOG00000015622	prpf6	99	86.929	Gadus_morhua
ENSTNIG00000017873	prpf6	100	85.624	ENSGALG00000006001	PRPF6	100	85.307	Gallus_gallus
ENSTNIG00000017873	prpf6	100	90.032	ENSGAFG00000021109	prpf6	96	90.117	Gambusia_affinis
ENSTNIG00000017873	prpf6	100	88.948	ENSGACG00000002576	prpf6	99	88.948	Gasterosteus_aculeatus
ENSTNIG00000017873	prpf6	100	86.243	ENSGAGG00000008653	PRPF6	96	85.820	Gopherus_agassizii
ENSTNIG00000017873	prpf6	100	84.989	ENSGGOG00000016876	PRPF6	100	84.567	Gorilla_gorilla
ENSTNIG00000017873	prpf6	100	90.648	ENSHBUG00000004496	prpf6	96	90.648	Haplochromis_burtoni
ENSTNIG00000017873	prpf6	100	85.729	ENSHGLG00000009222	PRPF6	100	85.307	Heterocephalus_glaber_female
ENSTNIG00000017873	prpf6	97	85.466	ENSHGLG00100016600	PRPF6	100	85.033	Heterocephalus_glaber_male
ENSTNIG00000017873	prpf6	100	89.798	ENSHCOG00000011513	prpf6	96	89.798	Hippocampus_comes
ENSTNIG00000017873	prpf6	100	87.540	ENSIPUG00000004912	prpf6	96	87.540	Ictalurus_punctatus
ENSTNIG00000017873	prpf6	100	83.316	ENSSTOG00000002922	PRPF6	100	82.471	Ictidomys_tridecemlineatus
ENSTNIG00000017873	prpf6	100	85.835	ENSJJAG00000000836	Prpf6	100	85.412	Jaculus_jaculus
ENSTNIG00000017873	prpf6	100	90.436	ENSKMAG00000017800	prpf6	96	90.436	Kryptolebias_marmoratus
ENSTNIG00000017873	prpf6	100	89.904	ENSLBEG00000012582	prpf6	96	89.904	Labrus_bergylta
ENSTNIG00000017873	prpf6	100	86.984	ENSLOCG00000004827	prpf6	96	86.561	Lepisosteus_oculatus
ENSTNIG00000017873	prpf6	100	85.518	ENSLAFG00000005272	PRPF6	100	85.095	Loxodonta_africana
ENSTNIG00000017873	prpf6	100	84.884	ENSMFAG00000037542	PRPF6	100	84.461	Macaca_fascicularis
ENSTNIG00000017873	prpf6	100	78.881	ENSMMUG00000015558	PRPF6	100	78.458	Macaca_mulatta
ENSTNIG00000017873	prpf6	100	72.603	ENSMNEG00000045555	PRPF6	100	72.181	Macaca_nemestrina
ENSTNIG00000017873	prpf6	100	90.755	ENSMAMG00000010718	prpf6	96	90.755	Mastacembelus_armatus
ENSTNIG00000017873	prpf6	94	90.023	ENSMZEG00005026539	prpf6	100	90.023	Maylandia_zebra
ENSTNIG00000017873	prpf6	100	90.127	ENSMZEG00005015261	-	99	90.127	Maylandia_zebra
ENSTNIG00000017873	prpf6	97	85.575	ENSMGAG00000006634	PRPF6	100	85.249	Meleagris_gallopavo
ENSTNIG00000017873	prpf6	100	85.835	ENSMAUG00000013969	Prpf6	100	85.412	Mesocricetus_auratus
ENSTNIG00000017873	prpf6	88	83.797	ENSMICG00000017793	PRPF6	98	83.701	Microcebus_murinus
ENSTNIG00000017873	prpf6	100	85.941	ENSMOCG00000001701	Prpf6	100	85.518	Microtus_ochrogaster
ENSTNIG00000017873	prpf6	100	90.861	ENSMMOG00000020419	prpf6	100	90.861	Mola_mola
ENSTNIG00000017873	prpf6	97	85.539	ENSMODG00000017051	PRPF6	99	85.049	Monodelphis_domestica
ENSTNIG00000017873	prpf6	99	89.796	ENSMALG00000000089	prpf6	100	89.796	Monopterus_albus
ENSTNIG00000017873	prpf6	83	96.667	MGP_CAROLIEiJ_G0024814	Prpf6	87	92.920	Mus_caroli
ENSTNIG00000017873	prpf6	100	85.835	ENSMUSG00000002455	Prpf6	100	85.412	Mus_musculus
ENSTNIG00000017873	prpf6	100	85.835	MGP_PahariEiJ_G0026262	Prpf6	100	85.412	Mus_pahari
ENSTNIG00000017873	prpf6	100	85.835	MGP_SPRETEiJ_G0025741	Prpf6	100	85.412	Mus_spretus
ENSTNIG00000017873	prpf6	91	85.308	ENSMPUG00000008673	PRPF6	99	84.834	Mustela_putorius_furo
ENSTNIG00000017873	prpf6	100	85.941	ENSNGAG00000003365	Prpf6	100	85.518	Nannospalax_galili
ENSTNIG00000017873	prpf6	100	90.755	ENSNBRG00000015025	prpf6	96	90.755	Neolamprologus_brichardi
ENSTNIG00000017873	prpf6	100	84.884	ENSNLEG00000010208	PRPF6	100	84.461	Nomascus_leucogenys
ENSTNIG00000017873	prpf6	90	83.133	ENSMEUG00000009824	-	88	83.399	Notamacropus_eugenii
ENSTNIG00000017873	prpf6	100	79.915	ENSODEG00000004841	PRPF6	100	79.493	Octodon_degus
ENSTNIG00000017873	prpf6	100	90.648	ENSONIG00000017406	prpf6	96	90.648	Oreochromis_niloticus
ENSTNIG00000017873	prpf6	100	86.047	ENSOANG00000004920	PRPF6	100	85.624	Ornithorhynchus_anatinus
ENSTNIG00000017873	prpf6	99	83.778	ENSOCUG00000014151	PRPF6	100	83.351	Oryctolagus_cuniculus
ENSTNIG00000017873	prpf6	100	89.054	ENSORLG00000009592	prpf6	96	89.054	Oryzias_latipes
ENSTNIG00000017873	prpf6	100	89.160	ENSORLG00020001458	prpf6	96	89.160	Oryzias_latipes_hni
ENSTNIG00000017873	prpf6	100	89.160	ENSORLG00015018762	prpf6	96	89.160	Oryzias_latipes_hsok
ENSTNIG00000017873	prpf6	100	89.479	ENSOMEG00000012174	prpf6	96	89.479	Oryzias_melastigma
ENSTNIG00000017873	prpf6	100	79.811	ENSOGAG00000007573	PRPF6	100	79.390	Otolemur_garnettii
ENSTNIG00000017873	prpf6	100	85.412	ENSOARG00000008776	PRPF6	99	84.989	Ovis_aries
ENSTNIG00000017873	prpf6	100	84.989	ENSPPAG00000008686	PRPF6	100	84.567	Pan_paniscus
ENSTNIG00000017873	prpf6	100	85.941	ENSPPRG00000008497	PRPF6	100	85.518	Panthera_pardus
ENSTNIG00000017873	prpf6	97	85.683	ENSPTIG00000011184	PRPF6	97	85.249	Panthera_tigris_altaica
ENSTNIG00000017873	prpf6	100	84.989	ENSPTRG00000013765	PRPF6	100	84.567	Pan_troglodytes
ENSTNIG00000017873	prpf6	100	84.884	ENSPANG00000024135	PRPF6	100	84.461	Papio_anubis
ENSTNIG00000017873	prpf6	100	87.856	ENSPKIG00000005627	prpf6	99	87.434	Paramormyrops_kingsleyae
ENSTNIG00000017873	prpf6	92	85.304	ENSPSIG00000007717	PRPF6	98	85.304	Pelodiscus_sinensis
ENSTNIG00000017873	prpf6	100	88.535	ENSPMGG00000008925	prpf6	96	87.792	Periophthalmus_magnuspinnatus
ENSTNIG00000017873	prpf6	100	85.835	ENSPEMG00000016036	Prpf6	100	85.412	Peromyscus_maniculatus_bairdii
ENSTNIG00000017873	prpf6	99	82.328	ENSPMAG00000006144	prpf6	99	82.328	Petromyzon_marinus
ENSTNIG00000017873	prpf6	100	86.047	ENSPCIG00000017909	PRPF6	100	85.624	Phascolarctos_cinereus
ENSTNIG00000017873	prpf6	100	89.619	ENSPFOG00000006431	prpf6	96	89.619	Poecilia_formosa
ENSTNIG00000017873	prpf6	100	89.798	ENSPLAG00000005974	prpf6	96	89.798	Poecilia_latipinna
ENSTNIG00000017873	prpf6	100	90.117	ENSPMEG00000009977	prpf6	96	90.117	Poecilia_mexicana
ENSTNIG00000017873	prpf6	100	90.011	ENSPREG00000017993	prpf6	92	90.011	Poecilia_reticulata
ENSTNIG00000017873	prpf6	100	84.461	ENSPPYG00000011256	PRPF6	100	84.038	Pongo_abelii
ENSTNIG00000017873	prpf6	95	88.496	ENSPCAG00000006536	PRPF6	88	88.496	Procavia_capensis
ENSTNIG00000017873	prpf6	100	85.201	ENSPCOG00000016881	PRPF6	100	84.778	Propithecus_coquereli
ENSTNIG00000017873	prpf6	100	80.127	ENSPVAG00000014316	PRPF6	100	79.704	Pteropus_vampyrus
ENSTNIG00000017873	prpf6	100	80.871	ENSPNYG00000001939	prpf6	96	83.847	Pundamilia_nyererei
ENSTNIG00000017873	prpf6	100	87.924	ENSPNAG00000015606	prpf6	96	87.924	Pygocentrus_nattereri
ENSTNIG00000017873	prpf6	100	85.729	ENSRNOG00000051498	Prpf6	100	85.307	Rattus_norvegicus
ENSTNIG00000017873	prpf6	100	84.884	ENSRBIG00000043613	PRPF6	100	84.461	Rhinopithecus_bieti
ENSTNIG00000017873	prpf6	100	81.895	ENSRROG00000040969	PRPF6	100	81.474	Rhinopithecus_roxellana
ENSTNIG00000017873	prpf6	90	78.339	ENSSBOG00000020632	PRPF6	90	77.072	Saimiri_boliviensis_boliviensis
ENSTNIG00000017873	prpf6	100	86.047	ENSSHAG00000016810	PRPF6	100	85.624	Sarcophilus_harrisii
ENSTNIG00000017873	prpf6	99	88.367	ENSSFOG00015020859	prpf6	100	87.940	Scleropages_formosus
ENSTNIG00000017873	prpf6	100	89.692	ENSSMAG00000008112	prpf6	96	89.692	Scophthalmus_maximus
ENSTNIG00000017873	prpf6	100	91.073	ENSSDUG00000016142	prpf6	96	91.073	Seriola_dumerili
ENSTNIG00000017873	prpf6	100	91.073	ENSSLDG00000025283	prpf6	100	87.354	Seriola_lalandi_dorsalis
ENSTNIG00000017873	prpf6	92	84.138	ENSSPUG00000018260	PRPF6	98	84.138	Sphenodon_punctatus
ENSTNIG00000017873	prpf6	100	90.967	ENSSPAG00000015850	prpf6	96	90.967	Stegastes_partitus
ENSTNIG00000017873	prpf6	100	85.518	ENSSSCG00000029119	PRPF6	100	84.216	Sus_scrofa
ENSTNIG00000017873	prpf6	100	85.941	ENSTGUG00000007221	PRPF6	99	85.624	Taeniopygia_guttata
ENSTNIG00000017873	prpf6	100	92.561	ENSTRUG00000002920	prpf6	96	92.561	Takifugu_rubripes
ENSTNIG00000017873	prpf6	72	93.333	ENSTBEG00000005348	PRPF6	75	91.111	Tupaia_belangeri
ENSTNIG00000017873	prpf6	100	85.835	ENSTTRG00000013068	PRPF6	100	85.412	Tursiops_truncatus
ENSTNIG00000017873	prpf6	98	83.892	ENSUMAG00000021631	PRPF6	98	83.459	Ursus_maritimus
ENSTNIG00000017873	prpf6	100	85.624	ENSVVUG00000014948	PRPF6	100	85.201	Vulpes_vulpes
ENSTNIG00000017873	prpf6	100	85.533	ENSXETG00000012054	prpf6	97	85.111	Xenopus_tropicalis
ENSTNIG00000017873	prpf6	100	90.223	ENSXCOG00000008082	prpf6	96	90.223	Xiphophorus_couchianus
ENSTNIG00000017873	prpf6	100	90.223	ENSXMAG00000015581	prpf6	96	90.223	Xiphophorus_maculatus