EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSTNIG00000017954 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: cb445|cb789|sb:cb445|wu:fa06c04|wu:fb16f02
Full Name: -
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Plus strand
Length: 3127 bases
Position: chr13:4411375-4414501
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021116	MMR_HSR1	PF01926.23	7.5e-06	1	1
ENSTNIP00000014812	MMR_HSR1	PF01926.23	1.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021349	-	971	-	ENSTNIP00000021116	178 (aa)	-	Q4RJQ7
ENSTNIT00000015013	-	650	-	ENSTNIP00000014812	188 (aa)	-	H3D2S4

Gene Model

Click here to download ENSTNIG00000017954's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017954's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSTNIG00000017954	-	92	47.273	ENSTNIG00000013830	arl2	89	47.273
ENSTNIG00000017954	-	96	30.220	ENSTNIG00000007336	arl8bb	94	30.220
ENSTNIG00000017954	-	78	34.532	ENSTNIG00000016097	sar1b	70	34.532
ENSTNIG00000017954	-	91	41.243	ENSTNIG00000015242	-	88	41.243
ENSTNIG00000017954	-	93	41.714	ENSTNIG00000009030	-	91	41.714
ENSTNIG00000017954	-	90	41.860	ENSTNIG00000010605	arl11	90	41.860
ENSTNIG00000017954	-	93	42.529	ENSTNIG00000009430	ARL6	98	39.474
ENSTNIG00000017954	-	99	78.531	ENSTNIG00000015063	-	98	78.531
ENSTNIG00000017954	-	81	68.966	ENSTNIG00000000796	-	64	68.966
ENSTNIG00000017954	-	63	30.000	ENSTNIG00000006650	RAB19	53	30.000
ENSTNIG00000017954	-	100	84.358	ENSTNIG00000003348	arf5	100	84.358
ENSTNIG00000017954	-	97	45.665	ENSTNIG00000005852	arl8	96	45.665
ENSTNIG00000017954	-	94	60.355	ENSTNIG00000019582	arf6b	97	60.355
ENSTNIG00000017954	-	99	79.096	ENSTNIG00000014595	arf3b	98	79.096
ENSTNIG00000017954	-	80	33.333	ENSTNIG00000014751	arl8ba	77	33.333
ENSTNIG00000017954	-	52	30.303	ENSTNIG00000004511	-	60	30.303
ENSTNIG00000017954	-	62	71.171	ENSTNIG00000005043	-	98	71.171
ENSTNIG00000017954	-	71	40.146	ENSTNIG00000005278	arfrp1	97	40.146
ENSTNIG00000017954	-	99	42.938	ENSTNIG00000000814	arl5a	99	40.957
ENSTNIG00000017954	-	92	39.247	ENSTNIG00000004395	ARL6	89	39.247
ENSTNIG00000017954	-	89	45.912	ENSTNIG00000004344	arl3	91	42.529
ENSTNIG00000017954	-	92	45.304	ENSTNIG00000000601	arl4aa	86	45.304
ENSTNIG00000017954	-	91	32.203	ENSTNIG00000008635	sar1ab	88	32.203
ENSTNIG00000017954	-	97	41.040	ENSTNIG00000003015	arl5c	96	41.040
ENSTNIG00000017954	-	96	45.556	ENSTNIG00000003426	-	94	42.857
ENSTNIG00000017954	-	83	68.027	ENSTNIG00000001632	-	73	61.677
ENSTNIG00000017954	-	99	53.672	ENSTNIG00000006920	arl1	97	53.672
ENSTNIG00000017954	-	99	81.356	ENSTNIG00000002029	arf2b	98	81.356
ENSTNIG00000017954	-	92	43.293	ENSTNIG00000014233	arl3l2	88	43.293
ENSTNIG00000017954	-	97	81.609	ENSTNIG00000011685	-	97	81.609
ENSTNIG00000017954	-	83	65.541	ENSTNIG00000018302	-	73	59.524
ENSTNIG00000017954	-	63	30.000	ENSTNIG00000018498	-	51	30.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017954	-	100	81.006	ENSG00000004059	ARF5	99	83.444	Homo_sapiens
ENSTNIG00000017954	-	100	85.475	ENSAPOG00000000667	-	99	85.475	Acanthochromis_polyacanthus
ENSTNIG00000017954	-	100	81.006	ENSAMEG00000004635	ARF5	99	81.006	Ailuropoda_melanoleuca
ENSTNIG00000017954	-	100	84.916	ENSACIG00000000467	-	99	84.916	Amphilophus_citrinellus
ENSTNIG00000017954	-	100	84.916	ENSACIG00000005843	arf5	99	84.916	Amphilophus_citrinellus
ENSTNIG00000017954	-	99	69.886	ENSACIG00000014610	zgc:110286	98	69.886	Amphilophus_citrinellus
ENSTNIG00000017954	-	100	83.240	ENSAOCG00000008113	-	99	83.240	Amphiprion_ocellaris
ENSTNIG00000017954	-	100	83.240	ENSAOCG00000023329	arf5	99	83.240	Amphiprion_ocellaris
ENSTNIG00000017954	-	100	83.240	ENSAPEG00000003087	-	99	83.240	Amphiprion_percula
ENSTNIG00000017954	-	100	83.240	ENSAPEG00000024614	arf5	99	83.240	Amphiprion_percula
ENSTNIG00000017954	-	100	84.358	ENSATEG00000003053	ARF5	99	84.358	Anabas_testudineus
ENSTNIG00000017954	-	100	87.151	ENSATEG00000001302	-	99	87.151	Anabas_testudineus
ENSTNIG00000017954	-	100	81.006	ENSANAG00000026446	ARF5	99	81.006	Aotus_nancymaae
ENSTNIG00000017954	-	100	85.475	ENSACLG00000025604	-	99	85.475	Astatotilapia_calliptera
ENSTNIG00000017954	-	100	84.916	ENSACLG00000005705	arf5	99	84.916	Astatotilapia_calliptera
ENSTNIG00000017954	-	100	84.916	ENSAMXG00000038224	-	99	84.916	Astyanax_mexicanus
ENSTNIG00000017954	-	100	84.916	ENSAMXG00000004249	-	99	84.916	Astyanax_mexicanus
ENSTNIG00000017954	-	100	83.799	ENSAMXG00000031467	arf4a	99	83.799	Astyanax_mexicanus
ENSTNIG00000017954	-	100	85.475	ENSAMXG00000031774	ARF5	99	85.475	Astyanax_mexicanus
ENSTNIG00000017954	-	100	81.006	ENSBTAG00000009366	ARF5	99	81.006	Bos_taurus
ENSTNIG00000017954	-	100	83.799	WBGene00000183	arf-3	99	83.799	Caenorhabditis_elegans
ENSTNIG00000017954	-	100	81.006	ENSCJAG00000017604	ARF5	99	81.006	Callithrix_jacchus
ENSTNIG00000017954	-	100	68.075	ENSCAFG00020021629	ARF5	99	68.075	Canis_lupus_dingo
ENSTNIG00000017954	-	100	81.006	ENSCHIG00000018906	ARF5	99	81.006	Capra_hircus
ENSTNIG00000017954	-	100	79.444	ENSCPOG00000006239	ARF5	99	79.444	Cavia_porcellus
ENSTNIG00000017954	-	100	81.006	ENSCCAG00000027943	-	99	81.006	Cebus_capucinus
ENSTNIG00000017954	-	100	81.006	ENSCATG00000010217	ARF5	99	81.006	Cercocebus_atys
ENSTNIG00000017954	-	100	81.006	ENSCLAG00000007930	ARF5	99	81.006	Chinchilla_lanigera
ENSTNIG00000017954	-	100	81.006	ENSCSAG00000010208	ARF5	99	81.006	Chlorocebus_sabaeus
ENSTNIG00000017954	-	100	74.860	ENSCING00000004846	-	99	74.860	Ciona_intestinalis
ENSTNIG00000017954	-	100	72.928	ENSCSAVG00000001959	-	99	72.928	Ciona_savignyi
ENSTNIG00000017954	-	89	80.000	ENSCANG00000037234	ARF5	98	80.000	Colobus_angolensis_palliatus
ENSTNIG00000017954	-	100	81.006	ENSCGRG00001024919	Arf5	99	81.006	Cricetulus_griseus_chok1gshd
ENSTNIG00000017954	-	100	79.888	ENSCSEG00000006004	arf5	99	79.888	Cynoglossus_semilaevis
ENSTNIG00000017954	-	100	84.916	ENSCVAG00000007314	-	99	84.916	Cyprinodon_variegatus
ENSTNIG00000017954	-	100	84.916	ENSCVAG00000009124	ARF5	99	84.916	Cyprinodon_variegatus
ENSTNIG00000017954	-	100	84.916	ENSCVAG00000011381	-	99	84.916	Cyprinodon_variegatus
ENSTNIG00000017954	-	100	68.333	ENSDARG00000074210	ARF5	88	68.333	Danio_rerio
ENSTNIG00000017954	-	100	83.799	ENSDARG00000045989	arf4a	99	83.799	Danio_rerio
ENSTNIG00000017954	-	100	86.034	ENSDARG00000113899	zgc:77650	99	86.034	Danio_rerio
ENSTNIG00000017954	-	100	85.475	ENSDARG00000070472	arf5	99	85.475	Danio_rerio
ENSTNIG00000017954	-	100	81.006	ENSDORG00000000325	Arf5	99	81.006	Dipodomys_ordii
ENSTNIG00000017954	-	100	82.123	FBgn0013749	Arf102F	99	82.123	Drosophila_melanogaster
ENSTNIG00000017954	-	97	78.613	ENSETEG00000009275	ARF5	99	78.613	Echinops_telfairi
ENSTNIG00000017954	-	100	72.067	ENSEBUG00000004484	-	99	72.067	Eptatretus_burgeri
ENSTNIG00000017954	-	100	82.682	ENSEBUG00000014420	-	99	82.682	Eptatretus_burgeri
ENSTNIG00000017954	-	100	74.719	ENSELUG00000014428	arf4	99	74.719	Esox_lucius
ENSTNIG00000017954	-	100	81.006	ENSFCAG00000005482	ARF5	99	81.006	Felis_catus
ENSTNIG00000017954	-	100	84.916	ENSFHEG00000023119	arf5	99	84.916	Fundulus_heteroclitus
ENSTNIG00000017954	-	100	83.240	ENSGMOG00000019109	-	99	83.240	Gadus_morhua
ENSTNIG00000017954	-	100	81.006	ENSGMOG00000008747	arf5	99	81.006	Gadus_morhua
ENSTNIG00000017954	-	100	84.916	ENSGAFG00000018703	arf5	99	84.916	Gambusia_affinis
ENSTNIG00000017954	-	100	83.240	ENSGAFG00000005163	-	99	83.240	Gambusia_affinis
ENSTNIG00000017954	-	100	83.799	ENSGACG00000012500	-	99	83.799	Gasterosteus_aculeatus
ENSTNIG00000017954	-	100	82.682	ENSGACG00000000686	arf5	99	82.682	Gasterosteus_aculeatus
ENSTNIG00000017954	-	100	81.006	ENSGAGG00000000231	ARF5	99	81.006	Gopherus_agassizii
ENSTNIG00000017954	-	100	81.006	ENSGGOG00000016749	ARF5	99	81.006	Gorilla_gorilla
ENSTNIG00000017954	-	100	85.475	ENSHBUG00000011041	-	99	85.475	Haplochromis_burtoni
ENSTNIG00000017954	-	100	84.916	ENSHBUG00000008546	arf5	99	84.916	Haplochromis_burtoni
ENSTNIG00000017954	-	100	81.006	ENSHGLG00000007494	ARF5	99	81.006	Heterocephalus_glaber_female
ENSTNIG00000017954	-	100	80.447	ENSHGLG00100006040	ARF5	60	80.447	Heterocephalus_glaber_male
ENSTNIG00000017954	-	100	84.358	ENSHCOG00000015577	-	100	84.358	Hippocampus_comes
ENSTNIG00000017954	-	100	84.358	ENSIPUG00000007016	arf4	99	84.358	Ictalurus_punctatus
ENSTNIG00000017954	-	100	68.156	ENSIPUG00000006913	-	70	68.156	Ictalurus_punctatus
ENSTNIG00000017954	-	100	82.682	ENSIPUG00000004215	arf5	99	82.682	Ictalurus_punctatus
ENSTNIG00000017954	-	100	83.799	ENSIPUG00000004159	Arf5	99	83.799	Ictalurus_punctatus
ENSTNIG00000017954	-	100	81.006	ENSSTOG00000002104	ARF5	99	81.006	Ictidomys_tridecemlineatus
ENSTNIG00000017954	-	100	81.006	ENSJJAG00000005105	Arf5	99	81.006	Jaculus_jaculus
ENSTNIG00000017954	-	100	85.475	ENSKMAG00000012816	-	99	85.475	Kryptolebias_marmoratus
ENSTNIG00000017954	-	99	80.899	ENSLBEG00000012002	-	98	80.899	Labrus_bergylta
ENSTNIG00000017954	-	100	84.358	ENSLBEG00000026532	arf5	99	84.358	Labrus_bergylta
ENSTNIG00000017954	-	100	81.006	ENSLAFG00000011469	ARF5	99	81.006	Loxodonta_africana
ENSTNIG00000017954	-	100	81.006	ENSMFAG00000019772	ARF5	99	81.006	Macaca_fascicularis
ENSTNIG00000017954	-	100	81.006	ENSMMUG00000046381	ARF5	99	81.006	Macaca_mulatta
ENSTNIG00000017954	-	100	81.006	ENSMNEG00000040893	ARF5	99	81.006	Macaca_nemestrina
ENSTNIG00000017954	-	100	83.799	ENSMAMG00000021160	arf5	99	83.799	Mastacembelus_armatus
ENSTNIG00000017954	-	100	87.709	ENSMAMG00000008223	-	99	87.709	Mastacembelus_armatus
ENSTNIG00000017954	-	88	85.987	ENSMZEG00005019741	-	93	85.987	Maylandia_zebra
ENSTNIG00000017954	-	100	84.916	ENSMZEG00005015033	arf5	66	84.916	Maylandia_zebra
ENSTNIG00000017954	-	100	81.006	ENSMAUG00000014825	Arf5	99	81.006	Mesocricetus_auratus
ENSTNIG00000017954	-	100	81.006	ENSMICG00000000091	ARF5	99	81.006	Microcebus_murinus
ENSTNIG00000017954	-	100	81.006	ENSMOCG00000022861	Arf5	99	81.006	Microtus_ochrogaster
ENSTNIG00000017954	-	100	80.447	ENSMODG00000015229	ARF5	99	80.447	Monodelphis_domestica
ENSTNIG00000017954	-	100	83.799	ENSMALG00000010117	-	99	83.799	Monopterus_albus
ENSTNIG00000017954	-	100	87.151	ENSMALG00000006020	-	99	87.151	Monopterus_albus
ENSTNIG00000017954	-	100	67.416	ENSMALG00000022638	zgc:110286	100	67.416	Monopterus_albus
ENSTNIG00000017954	-	100	81.006	MGP_CAROLIEiJ_G0028156	Arf5	99	81.006	Mus_caroli
ENSTNIG00000017954	-	100	81.006	ENSMUSG00000020440	Arf5	99	81.006	Mus_musculus
ENSTNIG00000017954	-	100	81.006	MGP_PahariEiJ_G0021914	Arf5	99	81.006	Mus_pahari
ENSTNIG00000017954	-	100	81.006	MGP_SPRETEiJ_G0029156	Arf5	99	81.006	Mus_spretus
ENSTNIG00000017954	-	100	81.006	ENSMPUG00000006675	ARF5	99	81.006	Mustela_putorius_furo
ENSTNIG00000017954	-	100	81.006	ENSMLUG00000017122	ARF5	99	81.006	Myotis_lucifugus
ENSTNIG00000017954	-	100	81.006	ENSNGAG00000011743	Arf5	99	81.006	Nannospalax_galili
ENSTNIG00000017954	-	100	84.916	ENSNBRG00000018854	arf5	99	84.916	Neolamprologus_brichardi
ENSTNIG00000017954	-	100	81.006	ENSODEG00000011800	ARF5	99	81.006	Octodon_degus
ENSTNIG00000017954	-	100	84.916	ENSONIG00000007594	arf5	99	84.916	Oreochromis_niloticus
ENSTNIG00000017954	-	100	85.475	ENSONIG00000014890	-	99	85.475	Oreochromis_niloticus
ENSTNIG00000017954	-	100	81.006	ENSOCUG00000024365	ARF5	99	81.006	Oryctolagus_cuniculus
ENSTNIG00000017954	-	100	84.916	ENSORLG00020001755	-	99	84.916	Oryzias_latipes_hni
ENSTNIG00000017954	-	100	84.358	ENSOMEG00000020821	ARF5	99	84.358	Oryzias_melastigma
ENSTNIG00000017954	-	100	85.475	ENSOMEG00000000211	-	64	85.475	Oryzias_melastigma
ENSTNIG00000017954	-	100	81.006	ENSOGAG00000013336	ARF5	99	81.006	Otolemur_garnettii
ENSTNIG00000017954	-	100	81.006	ENSPPAG00000037755	ARF5	99	81.006	Pan_paniscus
ENSTNIG00000017954	-	100	81.006	ENSPPRG00000004674	ARF5	99	81.006	Panthera_pardus
ENSTNIG00000017954	-	100	81.006	ENSPTRG00000019651	ARF5	99	81.006	Pan_troglodytes
ENSTNIG00000017954	-	100	81.006	ENSPANG00000032970	ARF5	99	81.006	Papio_anubis
ENSTNIG00000017954	-	100	83.240	ENSPKIG00000025349	arf4a	99	83.240	Paramormyrops_kingsleyae
ENSTNIG00000017954	-	100	84.358	ENSPKIG00000013814	-	99	84.358	Paramormyrops_kingsleyae
ENSTNIG00000017954	-	100	84.916	ENSPKIG00000025381	-	99	84.916	Paramormyrops_kingsleyae
ENSTNIG00000017954	-	100	83.240	ENSPMGG00000009985	-	99	83.240	Periophthalmus_magnuspinnatus
ENSTNIG00000017954	-	100	81.006	ENSPEMG00000021476	Arf5	99	81.006	Peromyscus_maniculatus_bairdii
ENSTNIG00000017954	-	100	77.654	ENSPMAG00000009600	arf4a	100	77.654	Petromyzon_marinus
ENSTNIG00000017954	-	100	82.778	ENSPFOG00000017992	-	99	82.778	Poecilia_formosa
ENSTNIG00000017954	-	100	84.916	ENSPFOG00000015817	arf5	99	84.916	Poecilia_formosa
ENSTNIG00000017954	-	100	83.240	ENSPLAG00000015630	-	99	83.240	Poecilia_latipinna
ENSTNIG00000017954	-	100	84.916	ENSPLAG00000006742	arf5	99	84.916	Poecilia_latipinna
ENSTNIG00000017954	-	100	83.240	ENSPMEG00000004624	-	99	83.240	Poecilia_mexicana
ENSTNIG00000017954	-	100	84.916	ENSPMEG00000009605	arf5	99	84.916	Poecilia_mexicana
ENSTNIG00000017954	-	100	81.006	ENSPCOG00000027640	ARF5	99	81.006	Propithecus_coquereli
ENSTNIG00000017954	-	100	81.006	ENSPVAG00000013940	ARF5	99	81.006	Pteropus_vampyrus
ENSTNIG00000017954	-	100	85.475	ENSPNYG00000004931	-	99	85.475	Pundamilia_nyererei
ENSTNIG00000017954	-	100	84.916	ENSPNYG00000001663	arf5	99	84.916	Pundamilia_nyererei
ENSTNIG00000017954	-	100	71.508	ENSPNAG00000005054	-	99	71.508	Pygocentrus_nattereri
ENSTNIG00000017954	-	100	82.682	ENSPNAG00000004745	arf4a	99	82.682	Pygocentrus_nattereri
ENSTNIG00000017954	-	100	84.916	ENSPNAG00000024427	-	99	84.916	Pygocentrus_nattereri
ENSTNIG00000017954	-	100	65.922	ENSPNAG00000004475	-	99	65.922	Pygocentrus_nattereri
ENSTNIG00000017954	-	100	81.006	ENSRNOG00000007806	Arf5	99	81.006	Rattus_norvegicus
ENSTNIG00000017954	-	100	81.006	ENSRBIG00000039868	ARF5	99	81.006	Rhinopithecus_bieti
ENSTNIG00000017954	-	100	81.006	ENSRROG00000041157	ARF5	99	81.006	Rhinopithecus_roxellana
ENSTNIG00000017954	-	100	81.006	ENSSBOG00000021669	ARF5	99	81.006	Saimiri_boliviensis_boliviensis
ENSTNIG00000017954	-	100	80.447	ENSSHAG00000015053	ARF5	99	80.447	Sarcophilus_harrisii
ENSTNIG00000017954	-	100	76.536	ENSSFOG00015007701	-	99	76.536	Scleropages_formosus
ENSTNIG00000017954	-	100	85.475	ENSSFOG00015020707	ARF5	99	85.475	Scleropages_formosus
ENSTNIG00000017954	-	100	84.358	ENSSMAG00000004541	-	99	84.358	Scophthalmus_maximus
ENSTNIG00000017954	-	100	82.682	ENSSMAG00000011361	arf5	99	82.682	Scophthalmus_maximus
ENSTNIG00000017954	-	100	83.799	ENSSDUG00000005105	arf5	99	83.799	Seriola_dumerili
ENSTNIG00000017954	-	100	83.799	ENSSLDG00000017188	arf5	99	83.799	Seriola_lalandi_dorsalis
ENSTNIG00000017954	-	100	83.799	ENSSPAG00000014434	arf5	99	83.799	Stegastes_partitus
ENSTNIG00000017954	-	100	86.592	ENSSPAG00000022680	-	99	86.592	Stegastes_partitus
ENSTNIG00000017954	-	100	81.006	ENSSSCG00000016593	ARF5	99	81.006	Sus_scrofa
ENSTNIG00000017954	-	100	92.135	ENSTRUG00000025462	-	100	92.135	Takifugu_rubripes
ENSTNIG00000017954	-	90	81.366	ENSTTRG00000006043	ARF5	99	81.366	Tursiops_truncatus
ENSTNIG00000017954	-	100	81.006	ENSUAMG00000012982	ARF5	99	81.006	Ursus_americanus
ENSTNIG00000017954	-	100	81.006	ENSVVUG00000007062	ARF5	99	81.006	Vulpes_vulpes
ENSTNIG00000017954	-	100	83.240	ENSXCOG00000020384	-	99	83.240	Xiphophorus_couchianus
ENSTNIG00000017954	-	100	83.240	ENSXMAG00000004558	-	99	83.240	Xiphophorus_maculatus
ENSTNIG00000017954	-	100	84.916	ENSXMAG00000015306	arf5	99	84.916	Xiphophorus_maculatus