EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSTNIG00000017962 (Gene tree)
Gene ID: -
Gene Symbol: rbm28
Alias: zgc:56258
Full Name: RNA binding motif protein 28
Gene Type: protein_coding
Species: Tetraodon_nigroviridis
Status: putative
Strand: Minus strand
Length: 4714 bases
Position: chr13:4278755-4283468
Accession: ZDB-GENE-040426-960
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSTNIP00000021124	RRM_1	PF00076.22	7.7e-57	1	3
ENSTNIP00000021124	RRM_1	PF00076.22	7.7e-57	2	3
ENSTNIP00000021124	RRM_1	PF00076.22	7.7e-57	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSTNIT00000021357	-	2244	-	ENSTNIP00000021124	747 (aa)	-	H3DKS7

Gene Model

Click here to download ENSTNIG00000017962's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSTNIG00000017962's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSTNIG00000017962	rbm28	99	51.100	ENSG00000106344	RBM28	99	65.000	Homo_sapiens
ENSTNIG00000017962	rbm28	58	68.623	ENSAPOG00000015512	rbm28	99	60.248	Acanthochromis_polyacanthus
ENSTNIG00000017962	rbm28	75	61.364	ENSAMEG00000004776	RBM28	88	61.538	Ailuropoda_melanoleuca
ENSTNIG00000017962	rbm28	56	67.849	ENSACIG00000023153	rbm28	91	67.849	Amphilophus_citrinellus
ENSTNIG00000017962	rbm28	58	67.720	ENSAOCG00000000462	rbm28	99	60.648	Amphiprion_ocellaris
ENSTNIG00000017962	rbm28	58	67.494	ENSAPEG00000012996	rbm28	99	60.674	Amphiprion_percula
ENSTNIG00000017962	rbm28	99	51.886	ENSANAG00000033922	RBM28	99	52.146	Aotus_nancymaae
ENSTNIG00000017962	rbm28	62	67.230	ENSACLG00000025024	rbm28	99	61.460	Astatotilapia_calliptera
ENSTNIG00000017962	rbm28	59	62.045	ENSAMXG00000000763	rbm28	99	62.727	Astyanax_mexicanus
ENSTNIG00000017962	rbm28	90	65.000	ENSBTAG00000017001	RBM28	99	65.000	Bos_taurus
ENSTNIG00000017962	rbm28	99	51.365	ENSCJAG00000017731	RBM28	99	52.010	Callithrix_jacchus
ENSTNIG00000017962	rbm28	99	51.108	ENSCAFG00000001667	RBM28	99	52.021	Canis_familiaris
ENSTNIG00000017962	rbm28	99	51.108	ENSCAFG00020021648	RBM28	99	52.021	Canis_lupus_dingo
ENSTNIG00000017962	rbm28	99	51.102	ENSCHIG00000014146	RBM28	99	51.662	Capra_hircus
ENSTNIG00000017962	rbm28	68	62.500	ENSTSYG00000002892	RBM28	99	62.500	Carlito_syrichta
ENSTNIG00000017962	rbm28	79	39.374	ENSCAPG00000013218	RBM28	93	40.097	Cavia_aperea
ENSTNIG00000017962	rbm28	64	54.021	ENSCPOG00000006253	RBM28	99	51.535	Cavia_porcellus
ENSTNIG00000017962	rbm28	86	53.320	ENSCCAG00000035105	RBM28	99	51.169	Cebus_capucinus
ENSTNIG00000017962	rbm28	99	51.742	ENSCATG00000040497	RBM28	99	65.000	Cercocebus_atys
ENSTNIG00000017962	rbm28	99	48.961	ENSCLAG00000003707	RBM28	99	48.649	Chinchilla_lanigera
ENSTNIG00000017962	rbm28	99	51.760	ENSCSAG00000010161	RBM28	99	51.943	Chlorocebus_sabaeus
ENSTNIG00000017962	rbm28	56	53.226	ENSCHOG00000001994	-	63	52.344	Choloepus_hoffmanni
ENSTNIG00000017962	rbm28	52	50.112	ENSCPBG00000018088	RBM28	82	50.562	Chrysemys_picta_bellii
ENSTNIG00000017962	rbm28	50	57.609	ENSCSAVG00000007149	-	94	40.483	Ciona_savignyi
ENSTNIG00000017962	rbm28	88	52.416	ENSCANG00000038397	RBM28	97	65.000	Colobus_angolensis_palliatus
ENSTNIG00000017962	rbm28	65	51.594	ENSCGRG00001021278	Rbm28	99	49.369	Cricetulus_griseus_chok1gshd
ENSTNIG00000017962	rbm28	99	49.678	ENSCGRG00000005098	Rbm28	99	50.323	Cricetulus_griseus_crigri
ENSTNIG00000017962	rbm28	99	57.052	ENSCSEG00000004212	rbm28	99	58.269	Cynoglossus_semilaevis
ENSTNIG00000017962	rbm28	87	59.773	ENSDARG00000025332	rbm28	99	49.351	Danio_rerio
ENSTNIG00000017962	rbm28	99	51.746	ENSDNOG00000001124	RBM28	99	51.292	Dasypus_novemcinctus
ENSTNIG00000017962	rbm28	64	51.807	ENSDORG00000004184	Rbm28	96	51.807	Dipodomys_ordii
ENSTNIG00000017962	rbm28	56	50.353	ENSETEG00000007130	RBM28	99	45.844	Echinops_telfairi
ENSTNIG00000017962	rbm28	83	44.009	ENSEBUG00000004419	rbm28	98	39.651	Eptatretus_burgeri
ENSTNIG00000017962	rbm28	63	53.222	ENSEASG00005008528	RBM28	99	50.704	Equus_asinus_asinus
ENSTNIG00000017962	rbm28	63	52.401	ENSECAG00000007745	RBM28	99	50.769	Equus_caballus
ENSTNIG00000017962	rbm28	99	47.607	ENSEEUG00000002389	RBM28	99	47.308	Erinaceus_europaeus
ENSTNIG00000017962	rbm28	99	55.542	ENSELUG00000020602	rbm28	99	56.030	Esox_lucius
ENSTNIG00000017962	rbm28	99	50.518	ENSFCAG00000000946	RBM28	99	65.000	Felis_catus
ENSTNIG00000017962	rbm28	99	50.450	ENSFDAG00000010169	RBM28	99	50.837	Fukomys_damarensis
ENSTNIG00000017962	rbm28	59	60.682	ENSGMOG00000007091	rbm28	99	54.316	Gadus_morhua
ENSTNIG00000017962	rbm28	59	67.841	ENSGAFG00000004802	rbm28	98	67.841	Gambusia_affinis
ENSTNIG00000017962	rbm28	58	67.946	ENSGACG00000012612	rbm28	99	61.436	Gasterosteus_aculeatus
ENSTNIG00000017962	rbm28	84	53.398	ENSGAGG00000008873	RBM28	74	67.442	Gopherus_agassizii
ENSTNIG00000017962	rbm28	95	50.068	ENSGGOG00000004644	RBM28	97	50.341	Gorilla_gorilla
ENSTNIG00000017962	rbm28	56	67.285	ENSHBUG00000009611	rbm28	99	61.134	Haplochromis_burtoni
ENSTNIG00000017962	rbm28	99	50.839	ENSHGLG00000005409	RBM28	99	51.226	Heterocephalus_glaber_female
ENSTNIG00000017962	rbm28	99	50.839	ENSHGLG00100016458	RBM28	99	51.226	Heterocephalus_glaber_male
ENSTNIG00000017962	rbm28	83	54.505	ENSHCOG00000010597	rbm28	99	45.855	Hippocampus_comes
ENSTNIG00000017962	rbm28	57	50.939	ENSIPUG00000007103	rbm28	99	47.106	Ictalurus_punctatus
ENSTNIG00000017962	rbm28	65	52.191	ENSSTOG00000002169	RBM28	99	50.575	Ictidomys_tridecemlineatus
ENSTNIG00000017962	rbm28	56	53.440	ENSJJAG00000022400	Rbm28	99	48.438	Jaculus_jaculus
ENSTNIG00000017962	rbm28	59	67.920	ENSKMAG00000013348	rbm28	99	59.539	Kryptolebias_marmoratus
ENSTNIG00000017962	rbm28	59	69.643	ENSLBEG00000012998	rbm28	99	61.217	Labrus_bergylta
ENSTNIG00000017962	rbm28	73	45.545	ENSLACG00000010485	-	100	48.359	Latimeria_chalumnae
ENSTNIG00000017962	rbm28	88	58.038	ENSLOCG00000015541	rbm28	80	57.526	Lepisosteus_oculatus
ENSTNIG00000017962	rbm28	99	50.767	ENSLAFG00000010717	RBM28	99	51.145	Loxodonta_africana
ENSTNIG00000017962	rbm28	99	51.742	ENSMFAG00000031036	RBM28	99	65.000	Macaca_fascicularis
ENSTNIG00000017962	rbm28	99	52.010	ENSMMUG00000007250	RBM28	99	65.000	Macaca_mulatta
ENSTNIG00000017962	rbm28	99	52.089	ENSMNEG00000036970	RBM28	99	65.000	Macaca_nemestrina
ENSTNIG00000017962	rbm28	80	51.899	ENSMLEG00000037717	RBM28	99	52.411	Mandrillus_leucophaeus
ENSTNIG00000017962	rbm28	99	61.881	ENSMAMG00000008525	rbm28	99	62.008	Mastacembelus_armatus
ENSTNIG00000017962	rbm28	62	67.230	ENSMZEG00005019625	rbm28	99	60.631	Maylandia_zebra
ENSTNIG00000017962	rbm28	65	51.406	ENSMAUG00000002263	Rbm28	99	49.747	Mesocricetus_auratus
ENSTNIG00000017962	rbm28	93	49.525	ENSMICG00000000107	RBM28	99	49.528	Microcebus_murinus
ENSTNIG00000017962	rbm28	99	49.870	ENSMOCG00000014615	Rbm28	99	50.450	Microtus_ochrogaster
ENSTNIG00000017962	rbm28	59	69.457	ENSMMOG00000008600	rbm28	99	66.250	Mola_mola
ENSTNIG00000017962	rbm28	99	49.430	ENSMODG00000015151	RBM28	99	50.515	Monodelphis_domestica
ENSTNIG00000017962	rbm28	90	69.042	ENSMALG00000006419	rbm28	99	59.924	Monopterus_albus
ENSTNIG00000017962	rbm28	99	49.614	MGP_CAROLIEiJ_G0028162	Rbm28	99	50.388	Mus_caroli
ENSTNIG00000017962	rbm28	99	50.456	ENSMUSG00000029701	Rbm28	99	50.845	Mus_musculus
ENSTNIG00000017962	rbm28	99	49.805	MGP_PahariEiJ_G0021920	Rbm28	99	50.712	Mus_pahari
ENSTNIG00000017962	rbm28	99	49.806	MGP_SPRETEiJ_G0029162	Rbm28	99	50.454	Mus_spretus
ENSTNIG00000017962	rbm28	99	51.688	ENSMPUG00000006511	RBM28	99	51.804	Mustela_putorius_furo
ENSTNIG00000017962	rbm28	99	50.582	ENSMLUG00000002186	RBM28	99	51.484	Myotis_lucifugus
ENSTNIG00000017962	rbm28	99	48.047	ENSNGAG00000017946	-	99	47.984	Nannospalax_galili
ENSTNIG00000017962	rbm28	99	49.037	ENSNGAG00000006480	-	99	49.166	Nannospalax_galili
ENSTNIG00000017962	rbm28	99	51.223	ENSNLEG00000012307	RBM28	99	65.000	Nomascus_leucogenys
ENSTNIG00000017962	rbm28	81	59.259	ENSMEUG00000009611	RBM28	90	59.259	Notamacropus_eugenii
ENSTNIG00000017962	rbm28	89	47.181	ENSODEG00000013217	-	99	46.933	Octodon_degus
ENSTNIG00000017962	rbm28	99	47.865	ENSODEG00000003213	-	99	49.227	Octodon_degus
ENSTNIG00000017962	rbm28	60	69.095	ENSONIG00000014924	rbm28	99	60.453	Oreochromis_niloticus
ENSTNIG00000017962	rbm28	64	49.180	ENSOANG00000000815	-	99	48.512	Ornithorhynchus_anatinus
ENSTNIG00000017962	rbm28	64	52.525	ENSOCUG00000003009	RBM28	99	51.091	Oryctolagus_cuniculus
ENSTNIG00000017962	rbm28	60	65.427	ENSORLG00000009636	rbm28	99	57.506	Oryzias_latipes
ENSTNIG00000017962	rbm28	82	65.208	ENSORLG00020002123	rbm28	99	57.895	Oryzias_latipes_hni
ENSTNIG00000017962	rbm28	86	64.944	ENSORLG00015015030	rbm28	98	64.944	Oryzias_latipes_hsok
ENSTNIG00000017962	rbm28	59	68.352	ENSOMEG00000007801	rbm28	99	60.982	Oryzias_melastigma
ENSTNIG00000017962	rbm28	83	60.000	ENSOGAG00000006011	RBM28	99	60.000	Otolemur_garnettii
ENSTNIG00000017962	rbm28	99	50.970	ENSOARG00000002547	RBM28	99	51.617	Ovis_aries
ENSTNIG00000017962	rbm28	99	50.839	ENSPPAG00000041730	RBM28	99	65.000	Pan_paniscus
ENSTNIG00000017962	rbm28	99	51.625	ENSPPRG00000004420	RBM28	99	65.000	Panthera_pardus
ENSTNIG00000017962	rbm28	99	51.886	ENSPTIG00000008550	RBM28	99	65.000	Panthera_tigris_altaica
ENSTNIG00000017962	rbm28	99	50.968	ENSPTRG00000019659	RBM28	99	65.000	Pan_troglodytes
ENSTNIG00000017962	rbm28	99	51.542	ENSPANG00000022295	RBM28	99	65.000	Papio_anubis
ENSTNIG00000017962	rbm28	99	53.317	ENSPKIG00000023453	rbm28	99	53.683	Paramormyrops_kingsleyae
ENSTNIG00000017962	rbm28	84	65.025	ENSPMGG00000012840	rbm28	99	54.485	Periophthalmus_magnuspinnatus
ENSTNIG00000017962	rbm28	65	50.600	ENSPEMG00000020673	Rbm28	99	49.544	Peromyscus_maniculatus_bairdii
ENSTNIG00000017962	rbm28	99	49.868	ENSPCIG00000012810	RBM28	99	50.850	Phascolarctos_cinereus
ENSTNIG00000017962	rbm28	59	67.621	ENSPFOG00000018209	rbm28	99	58.101	Poecilia_formosa
ENSTNIG00000017962	rbm28	59	67.261	ENSPLAG00000016078	rbm28	96	57.526	Poecilia_latipinna
ENSTNIG00000017962	rbm28	59	67.473	ENSPMEG00000004292	rbm28	100	57.733	Poecilia_mexicana
ENSTNIG00000017962	rbm28	59	66.593	ENSPREG00000014287	rbm28	99	57.560	Poecilia_reticulata
ENSTNIG00000017962	rbm28	99	51.108	ENSPPYG00000017975	RBM28	99	51.239	Pongo_abelii
ENSTNIG00000017962	rbm28	73	51.124	ENSPCAG00000008223	RBM28	83	50.964	Procavia_capensis
ENSTNIG00000017962	rbm28	94	65.000	ENSPCOG00000016797	RBM28	99	65.000	Propithecus_coquereli
ENSTNIG00000017962	rbm28	77	61.111	ENSPVAG00000005443	RBM28	74	61.111	Pteropus_vampyrus
ENSTNIG00000017962	rbm28	99	58.239	ENSPNYG00000014003	rbm28	99	61.204	Pundamilia_nyererei
ENSTNIG00000017962	rbm28	99	49.935	ENSRNOG00000005468	Rbm28	99	50.843	Rattus_norvegicus
ENSTNIG00000017962	rbm28	99	51.542	ENSRBIG00000033990	RBM28	99	65.000	Rhinopithecus_bieti
ENSTNIG00000017962	rbm28	99	51.289	ENSRROG00000040747	RBM28	99	65.000	Rhinopithecus_roxellana
ENSTNIG00000017962	rbm28	90	47.927	ENSSBOG00000012308	RBM28	99	47.668	Saimiri_boliviensis_boliviensis
ENSTNIG00000017962	rbm28	96	49.123	ENSSHAG00000017017	RBM28	97	49.307	Sarcophilus_harrisii
ENSTNIG00000017962	rbm28	58	60.455	ENSSFOG00015001231	rbm28	99	53.125	Scleropages_formosus
ENSTNIG00000017962	rbm28	60	65.479	ENSSMAG00000003885	rbm28	99	63.115	Scophthalmus_maximus
ENSTNIG00000017962	rbm28	60	71.711	ENSSDUG00000014270	rbm28	92	69.439	Seriola_dumerili
ENSTNIG00000017962	rbm28	74	58.556	ENSSARG00000008303	RBM28	78	59.524	Sorex_araneus
ENSTNIG00000017962	rbm28	84	43.038	ENSSPUG00000000838	RBM28	80	61.765	Sphenodon_punctatus
ENSTNIG00000017962	rbm28	58	69.369	ENSSPAG00000023305	rbm28	99	61.394	Stegastes_partitus
ENSTNIG00000017962	rbm28	99	51.876	ENSSSCG00000031847	RBM28	99	51.601	Sus_scrofa
ENSTNIG00000017962	rbm28	99	73.854	ENSTRUG00000013311	rbm28	99	73.978	Takifugu_rubripes
ENSTNIG00000017962	rbm28	68	55.732	ENSTBEG00000012749	RBM28	84	53.198	Tupaia_belangeri
ENSTNIG00000017962	rbm28	90	60.287	ENSTTRG00000013647	RBM28	99	50.572	Tursiops_truncatus
ENSTNIG00000017962	rbm28	99	48.196	ENSUAMG00000006949	RBM28	99	48.708	Ursus_americanus
ENSTNIG00000017962	rbm28	99	50.973	ENSUMAG00000005997	RBM28	99	52.381	Ursus_maritimus
ENSTNIG00000017962	rbm28	85	46.960	ENSVPAG00000008304	RBM28	85	46.936	Vicugna_pacos
ENSTNIG00000017962	rbm28	99	50.779	ENSVVUG00000007270	RBM28	99	51.688	Vulpes_vulpes
ENSTNIG00000017962	rbm28	91	64.734	ENSXETG00000009271	rbm28	99	50.253	Xenopus_tropicalis
ENSTNIG00000017962	rbm28	59	64.967	ENSXCOG00000020357	rbm28	99	62.062	Xiphophorus_couchianus
ENSTNIG00000017962	rbm28	59	67.778	ENSXMAG00000004415	rbm28	99	58.687	Xiphophorus_maculatus